EnhancerDB
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  3. vista43888[chr4:1535396-1535629]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43888[chr4:1535396-1535629]
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Tissue distribution of vista43888
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Transcription factor that possibly regulate vista43888[chr4:1535396-1535629]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1535565 1535748 GATA2 UCSC Txn Factor no Conserved 108531835
chr4 1535439 1535448 THAP1 JASPAR yes 49189072
chr4 1535439 1535448 THAP1 JASPAR yes 87811907
chr4 1535442 1535446 LFA1 TRANSFAC yes 49189073
chr4 1535442 1535446 LFA1 TRANSFAC yes 87811908
chr4 1535450 1535465 ZIC3 JASPAR yes 49189074
chr4 1535450 1535465 ZIC3 JASPAR yes 87811909
chr4 1535451 1535462 E2F4 JASPAR yes 49189075
chr4 1535451 1535462 E2F4 JASPAR yes 87811910
chr4 1535464 1535479 SOX21 JASPAR yes 49189076
chr4 1535464 1535479 SOX21 JASPAR yes 87811911
chr4 1535474 1535478 NFE TRANSFAC yes 49189077
chr4 1535474 1535478 NFE TRANSFAC yes 87811912
chr4 1535495 1535507 PBX1 JASPAR yes 49189078
chr4 1535495 1535507 PBX1 JASPAR yes 87811913
chr4 1535506 1535515 SNAI2 JASPAR yes 49189079
chr4 1535506 1535515 SNAI2 JASPAR yes 87811914
chr4 1535507 1535512 USF2 TRANSFAC yes 49189080
chr4 1535507 1535512 USF2 TRANSFAC yes 87811915
chr4 1535515 1535527 HES5 JASPAR yes 49189081
chr4 1535515 1535527 HES7 JASPAR yes 49189082
chr4 1535515 1535527 HES5 JASPAR yes 87811916
chr4 1535515 1535527 HES7 JASPAR yes 87811917
chr4 1535516 1535526 BHLHE40 JASPAR yes 49189083
chr4 1535516 1535526 CLOCK JASPAR yes 49189084
chr4 1535516 1535526 HEY1 JASPAR yes 49189085
chr4 1535516 1535526 MAX JASPAR yes 49189086
chr4 1535516 1535526 MNT JASPAR yes 49189087
chr4 1535516 1535526 BHLHE40 JASPAR yes 87811918
chr4 1535516 1535526 CLOCK JASPAR yes 87811919
chr4 1535516 1535526 HEY1 JASPAR yes 87811920
chr4 1535516 1535526 MAX JASPAR yes 87811921
chr4 1535516 1535526 MNT JASPAR yes 87811922
chr4 1535518 1535523 MYC TRANSFAC yes 49189088
chr4 1535518 1535523 USF1 TRANSFAC yes 49189089
chr4 1535518 1535523 USF2 TRANSFAC yes 49189090
chr4 1535518 1535523 MYC TRANSFAC yes 87811923
chr4 1535518 1535523 USF1 TRANSFAC yes 87811924
chr4 1535518 1535523 USF2 TRANSFAC yes 87811925
chr4 1535530 1535542 TAL1 JASPAR yes 49189091
chr4 1535530 1535542 TAL1 JASPAR yes 87811926
chr4 1535532 1535542 OLIG3 JASPAR yes 49189092
chr4 1535532 1535542 OLIG3 JASPAR yes 87811927
chr4 1535545 1535560 IRF9 JASPAR yes 49189093
chr4 1535545 1535560 IRF9 JASPAR yes 87811928
chr4 1535547 1535561 STAT1 JASPAR yes 49189094
chr4 1535547 1535561 STAT1 JASPAR yes 87811929
chr4 1535571 1535575 H4TF2 TRANSFAC yes 49189095
chr4 1535571 1535575 H4TF2 TRANSFAC yes 87811930
chr4 1535585 1535588 MYB TRANSFAC yes 49189096
chr4 1535585 1535588 MYB TRANSFAC yes 87811931
chr4 1535595 1535606 HOXA10 JASPAR yes 49189097
chr4 1535595 1535606 HOXA10 JASPAR yes 87811932
chr4 1535596 1535605 CDX1 JASPAR yes 49189098
chr4 1535596 1535605 CDX1 JASPAR yes 87811933
chr4 1535596 1535607 CDX2 JASPAR yes 49189099
chr4 1535596 1535607 CDX2 JASPAR yes 87811934
SNP sites on vista43888[chr4:1535396-1535629]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1535414 rs527963195 G A no 7346905
chr4 1535629 rs555448571 G A
GATA2
7346906
Genes possibly regulated by vista43888[chr4:1535396-1535629]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43888[chr4:1535396-1535629]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results