EnhancerDB
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  3. vista43890[chr4:1710531-1710811]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43890[chr4:1710531-1710811]
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Tissue distribution of vista43890
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Transcription factor that possibly regulate vista43890[chr4:1710531-1710811]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1710216 1710686 GATA3 UCSC Txn Factor no Conserved 108531837
chr4 1710529 1710541 PKNOX2 JASPAR yes 49189157
chr4 1710529 1710541 PKNOX2 JASPAR yes 87824380
chr4 1710534 1710549 TFAP2C JASPAR yes 49189158
chr4 1710534 1710549 TFAP2C JASPAR yes 87824381
chr4 1710536 1710548 TFAP2A JASPAR yes 49189159
chr4 1710536 1710548 TFAP2B JASPAR yes 49189160
chr4 1710536 1710548 TFAP2C JASPAR yes 49189161
chr4 1710536 1710548 TFAP2A JASPAR yes 87824382
chr4 1710536 1710548 TFAP2B JASPAR yes 87824383
chr4 1710536 1710548 TFAP2C JASPAR yes 87824384
chr4 1710536 1710551 TFAP2A JASPAR yes 49189162
chr4 1710536 1710551 TFAP2A JASPAR yes 87824385
chr4 1710546 1710550 YY1 TRANSFAC yes 49189163
chr4 1710546 1710550 YY1 TRANSFAC yes 87824386
chr4 1710549 1710554 GATA2 JASPAR yes 49189164
chr4 1710549 1710554 GATA2 JASPAR yes 87824387
chr4 1710550 1710556 ZNF354C JASPAR yes 49189165
chr4 1710550 1710556 ZNF354C JASPAR yes 87824388
chr4 1710557 1710568 FOXA1 JASPAR yes 49189166
chr4 1710557 1710568 FOXA1 JASPAR yes 87824389
chr4 1710557 1710572 FOXA1 JASPAR yes 49189167
chr4 1710557 1710572 FOXA1 JASPAR yes 87824390
chr4 1710569 1710584 HNF4G JASPAR yes 49189168
chr4 1710569 1710584 HNF4G JASPAR yes 87824391
chr4 1710570 1710584 NR2F1 JASPAR yes 49189169
chr4 1710570 1710584 NR2F1 JASPAR yes 87824392
chr4 1710570 1710585 HNF4A JASPAR yes 49189170
chr4 1710570 1710585 HNF4A JASPAR yes 87824393
chr4 1710573 1710579 TCF4 TRANSFAC yes 49189171
chr4 1710573 1710579 TCF4 TRANSFAC yes 87824394
chr4 1710575 1710596 REST JASPAR yes 49189172
chr4 1710575 1710596 REST JASPAR yes 87824395
chr4 1710593 1710603 TEAD1 JASPAR yes 49189173
chr4 1710593 1710603 TEAD1 JASPAR yes 87824396
chr4 1710594 1710602 TEAD3 JASPAR yes 49189174
chr4 1710594 1710602 TEAD3 JASPAR yes 87824397
chr4 1710611 1710624 JUN JASPAR yes 49189175
chr4 1710611 1710624 JUN JASPAR yes 87824398
chr4 1710636 1710639 MYB TRANSFAC yes 49189176
chr4 1710636 1710639 MYB TRANSFAC yes 87824399
chr4 1710660 1710675 MEF2A JASPAR yes 49189177
chr4 1710660 1710675 MEF2A JASPAR yes 87824400
chr4 1710661 1710676 MEF2C JASPAR yes 49189178
chr4 1710661 1710676 MEF2C JASPAR yes 87824401
chr4 1710662 1710674 MEF2A JASPAR yes 49189179
chr4 1710662 1710674 MEF2A JASPAR yes 87824402
chr4 1710662 1710677 LEF1 JASPAR yes 49189180
chr4 1710662 1710677 LEF1 JASPAR yes 87824403
chr4 1710663 1710677 GATA2 JASPAR yes 49189181
chr4 1710663 1710677 GATA2 JASPAR yes 87824404
chr4 1710664 1710668 YY1 TRANSFAC yes 49189182
chr4 1710664 1710668 YY1 TRANSFAC yes 87824405
chr4 1710667 1710675 GATA3 JASPAR yes 49189183
chr4 1710667 1710675 GATA3 JASPAR yes 87824406
chr4 1710721 1710736 FOXA1 JASPAR yes 49189184
chr4 1710721 1710736 FOXA1 JASPAR yes 87824407
chr4 1710722 1710737 FOXP1 JASPAR yes 49189185
chr4 1710722 1710737 FOXP1 JASPAR yes 87824408
chr4 1710723 1710732 SRY JASPAR yes 49189186
chr4 1710723 1710732 SRY JASPAR yes 87824409
chr4 1710723 1710734 FOXP2 JASPAR yes 49189187
chr4 1710723 1710734 FOXP2 JASPAR yes 87824410
chr4 1710723 1710735 FOXC2 JASPAR yes 49189188
chr4 1710723 1710735 FOXC2 JASPAR yes 87824411
chr4 1710723 1710737 FOXF2 JASPAR yes 49189189
chr4 1710723 1710737 FOXF2 JASPAR yes 87824412
chr4 1710724 1710732 FOXD1 JASPAR yes 49189190
chr4 1710724 1710732 FOXG1 JASPAR yes 49189191
chr4 1710724 1710732 FOXO3 JASPAR yes 49189192
chr4 1710724 1710732 FOXD1 JASPAR yes 87824413
chr4 1710724 1710732 FOXG1 JASPAR yes 87824414
chr4 1710724 1710732 FOXO3 JASPAR yes 87824415
chr4 1710724 1710735 FOXB1 JASPAR yes 49189193
chr4 1710724 1710735 FOXC1 JASPAR yes 49189194
chr4 1710724 1710735 FOXB1 JASPAR yes 87824416
chr4 1710724 1710735 FOXC1 JASPAR yes 87824417
chr4 1710725 1710732 FOXD2 JASPAR yes 49189195
chr4 1710725 1710732 FOXI1 JASPAR yes 49189196
chr4 1710725 1710732 FOXL1 JASPAR yes 49189197
chr4 1710725 1710732 FOXO4 JASPAR yes 49189198
chr4 1710725 1710732 FOXO6 JASPAR yes 49189199
chr4 1710725 1710732 FOXP3 JASPAR yes 49189200
chr4 1710725 1710732 FOXD2 JASPAR yes 87824418
chr4 1710725 1710732 FOXI1 JASPAR yes 87824419
chr4 1710725 1710732 FOXL1 JASPAR yes 87824420
chr4 1710725 1710732 FOXO4 JASPAR yes 87824421
chr4 1710725 1710732 FOXO6 JASPAR yes 87824422
chr4 1710725 1710732 FOXP3 JASPAR yes 87824423
chr4 1710725 1710733 FOXO3 JASPAR yes 49189201
chr4 1710725 1710733 FOXO3 JASPAR yes 87824424
chr4 1710725 1710736 FOXA1 JASPAR yes 49189202
chr4 1710725 1710736 FOXA1 JASPAR yes 87824425
chr4 1710787 1710808 IRF1 JASPAR yes 49189203
chr4 1710787 1710808 IRF1 JASPAR yes 87824426
chr4 1710789 1710810 IRF1 JASPAR yes 49189204
chr4 1710789 1710810 IRF1 JASPAR yes 87824427
chr4 1710790 1710805 FOXP1 JASPAR yes 49189205
chr4 1710790 1710805 FOXP1 JASPAR yes 87824428
chr4 1710792 1710807 FOXP1 JASPAR yes 49189206
chr4 1710792 1710807 FOXP1 JASPAR yes 87824429
chr4 1710794 1710809 FOXP1 JASPAR yes 49189207
chr4 1710794 1710809 FOXP1 JASPAR yes 87824430
chr4 1710795 1710810 FOXP1 JASPAR yes 49189208
chr4 1710795 1710810 FOXP1 JASPAR yes 87824431
chr4 1710796 1710811 FOXP1 JASPAR yes 49189209
chr4 1710796 1710811 FOXP1 JASPAR yes 87824432
chr4 1710797 1710812 FOXP1 JASPAR yes 49189210
chr4 1710797 1710812 FOXP1 JASPAR yes 87824433
chr4 1710809 1710827 IRF2 JASPAR yes 49189211
chr4 1710809 1710827 IRF2 JASPAR yes 87824434
chr4 1710810 1710831 IRF1 JASPAR yes 49189212
chr4 1710810 1710831 IRF1 JASPAR yes 87824435
SNP sites on vista43890[chr4:1710531-1710811]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1710658 rs80341698 G A
GATA3
7348562
chr4 1710667 rs74443617 T C,G
GATA2 GATA3 LEF1 MEF2A MEF2C YY1
7348563
chr4 1710776 rs541496042 G A no 7348564
chr4 1710795 rs3993283 CT C
FOXP1 IRF1
7348565
chr4 1710795 rs566754863 CT C
FOXP1 IRF1
7348566
Genes possibly regulated by vista43890[chr4:1710531-1710811]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1619642 1686029 - FAM53A ENSG00000174137.8 1686029 0.86 0.98 4458 75498
chr4 1694527 1714282 - SLBP ENSG00000163950.8 1714282 0.85 0.99 4459 96529
chr4 1717679 1723085 - TMEM129 ENSG00000168936.6 1723085 0.66 1.0 4460 87726
chr4 1723227 1746898 + TACC3 ENSG00000013810.14 1723227 0.91 1.0 4461 87584
chr4 1795034 1810599 + FGFR3 ENSG00000068078.13 1795034 0.91 1.0 4462 15777
Expression level of Genes
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miRNAs possibly regulated by vista43890[chr4:1710531-1710811]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results