EnhancerDB
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  3. vista43893[chr4:1760039-1760352]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43893[chr4:1760039-1760352]
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Tissue distribution of vista43893
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Transcription factor that possibly regulate vista43893[chr4:1760039-1760352]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1760053 1760294 NR3C1 UCSC Txn Factor no Conserved 108531839
chr4 1760031 1760050 REST JASPAR yes 49189363
chr4 1760031 1760050 REST JASPAR yes 87828667
chr4 1760043 1760062 CTCF JASPAR yes 49189364
chr4 1760043 1760062 CTCF JASPAR yes 87828668
chr4 1760047 1760061 SPI1 JASPAR yes 49189365
chr4 1760047 1760061 SPIC JASPAR yes 49189366
chr4 1760047 1760061 SPI1 JASPAR yes 87828669
chr4 1760047 1760061 SPIC JASPAR yes 87828670
chr4 1760051 1760058 SPIB JASPAR yes 49189367
chr4 1760051 1760058 SPIB JASPAR yes 87828671
chr4 1760051 1760062 FLI1 JASPAR yes 49189368
chr4 1760051 1760062 FLI1 JASPAR yes 87828672
chr4 1760073 1760078 SP1 TRANSFAC yes 49189369
chr4 1760073 1760078 SP1 TRANSFAC yes 87828673
chr4 1760079 1760088 HIC2 JASPAR yes 49189370
chr4 1760079 1760088 HIC2 JASPAR yes 87828674
chr4 1760082 1760086 LFA1 TRANSFAC yes 49189371
chr4 1760082 1760086 LFA1 TRANSFAC yes 87828675
chr4 1760095 1760101 MAZ TRANSFAC yes 49189372
chr4 1760095 1760101 MAZ TRANSFAC yes 87828676
chr4 1760095 1760106 E2F6 JASPAR yes 49189373
chr4 1760095 1760106 E2F6 JASPAR yes 87828677
chr4 1760127 1760139 PKNOX1 JASPAR yes 49189374
chr4 1760127 1760139 PKNOX2 JASPAR yes 49189375
chr4 1760127 1760139 TGIF1 JASPAR yes 49189376
chr4 1760127 1760139 TGIF2 JASPAR yes 49189377
chr4 1760127 1760139 PKNOX1 JASPAR yes 87828678
chr4 1760127 1760139 PKNOX2 JASPAR yes 87828679
chr4 1760127 1760139 TGIF1 JASPAR yes 87828680
chr4 1760127 1760139 TGIF2 JASPAR yes 87828681
chr4 1760139 1760156 NR3C1 JASPAR yes 49189378
chr4 1760139 1760156 NR3C2 JASPAR yes 49189379
chr4 1760139 1760156 NR3C1 JASPAR yes 87828682
chr4 1760139 1760156 NR3C2 JASPAR yes 87828683
chr4 1760167 1760182 TFAP2A JASPAR yes 49189380
chr4 1760167 1760182 TFAP2C JASPAR yes 49189381
chr4 1760167 1760182 TFAP2A JASPAR yes 87828684
chr4 1760167 1760182 TFAP2C JASPAR yes 87828685
chr4 1760168 1760179 EBF1 JASPAR yes 49189382
chr4 1760168 1760179 TFAP2A JASPAR yes 49189383
chr4 1760168 1760179 TFAP2B JASPAR yes 49189384
chr4 1760168 1760179 TFAP2C JASPAR yes 49189385
chr4 1760168 1760179 EBF1 JASPAR yes 87828686
chr4 1760168 1760179 TFAP2A JASPAR yes 87828687
chr4 1760168 1760179 TFAP2B JASPAR yes 87828688
chr4 1760168 1760179 TFAP2C JASPAR yes 87828689
chr4 1760169 1760178 TFAP2A JASPAR yes 49189386
chr4 1760169 1760178 TFAP2A JASPAR yes 87828690
chr4 1760173 1760183 SP1 JASPAR yes 49189387
chr4 1760173 1760183 SP1 JASPAR yes 87828691
chr4 1760173 1760194 ZNF263 JASPAR yes 49189388
chr4 1760173 1760194 ZNF263 JASPAR yes 87828692
chr4 1760174 1760178 LFA1 TRANSFAC yes 49189389
chr4 1760174 1760178 LFA1 TRANSFAC yes 87828693
chr4 1760179 1760185 MAZ TRANSFAC yes 49189390
chr4 1760179 1760185 MAZ TRANSFAC yes 87828694
chr4 1760188 1760208 TP63 JASPAR yes 49189391
chr4 1760188 1760208 TP63 JASPAR yes 87828695
chr4 1760207 1760217 SP1 JASPAR yes 49189392
chr4 1760207 1760217 SP1 JASPAR yes 87828696
chr4 1760208 1760216 SP1 TRANSFAC yes 49189393
chr4 1760208 1760216 SP1 TRANSFAC yes 87828697
chr4 1760208 1760217 SP1 TRANSFAC yes 49189394
chr4 1760208 1760217 SP1 TRANSFAC yes 87828698
chr4 1760208 1760218 SP1 JASPAR yes 49189395
chr4 1760208 1760218 SP1 JASPAR yes 87828699
chr4 1760209 1760214 SP1 TRANSFAC yes 49189396
chr4 1760209 1760214 SP1 TRANSFAC yes 87828700
chr4 1760209 1760220 E2F4 JASPAR yes 49189397
chr4 1760209 1760220 E2F4 JASPAR yes 87828701
chr4 1760210 1760215 SP1 TRANSFAC yes 49189398
chr4 1760210 1760215 SP1 TRANSFAC yes 87828702
chr4 1760210 1760216 SP1 TRANSFAC yes 49189399
chr4 1760210 1760216 SP1 TRANSFAC yes 87828703
chr4 1760212 1760222 SP1 JASPAR yes 49189400
chr4 1760212 1760222 SP1 JASPAR yes 87828704
chr4 1760213 1760222 SP1 TRANSFAC yes 49189401
chr4 1760213 1760222 SP1 TRANSFAC yes 87828705
chr4 1760214 1760220 MAZ TRANSFAC yes 49189402
chr4 1760214 1760220 MAZ TRANSFAC yes 87828706
chr4 1760233 1760243 ID4 JASPAR yes 49189403
chr4 1760233 1760243 TCF4 JASPAR yes 49189404
chr4 1760233 1760243 ID4 JASPAR yes 87828707
chr4 1760233 1760243 TCF4 JASPAR yes 87828708
chr4 1760251 1760262 TFAP2A JASPAR yes 49189405
chr4 1760251 1760262 TFAP2B JASPAR yes 49189406
chr4 1760251 1760262 TFAP2C JASPAR yes 49189407
chr4 1760251 1760262 TFAP2A JASPAR yes 87828709
chr4 1760251 1760262 TFAP2B JASPAR yes 87828710
chr4 1760251 1760262 TFAP2C JASPAR yes 87828711
chr4 1760252 1760261 TFAP2A JASPAR yes 49189408
chr4 1760252 1760261 TFAP2A JASPAR yes 87828712
chr4 1760259 1760270 EBF1 JASPAR yes 49189409
chr4 1760259 1760270 EBF1 JASPAR yes 87828713
chr4 1760263 1760268 TFAP2A TRANSFAC yes 49189410
chr4 1760263 1760268 TFAP2A TRANSFAC yes 87828714
chr4 1760263 1760269 MZF1 JASPAR yes 49189411
chr4 1760263 1760269 MZF1 JASPAR yes 87828715
chr4 1760268 1760273 SP1 TRANSFAC yes 49189412
chr4 1760268 1760273 SP1 TRANSFAC yes 87828716
chr4 1760277 1760297 TP53 JASPAR yes 49189413
chr4 1760277 1760297 TP53 JASPAR yes 87828717
chr4 1760279 1760299 TP63 JASPAR yes 49189414
chr4 1760279 1760299 TP63 JASPAR yes 87828718
chr4 1760280 1760298 TP53 JASPAR yes 49189415
chr4 1760280 1760298 TP53 JASPAR yes 87828719
chr4 1760282 1760297 TP53 JASPAR yes 49189416
chr4 1760282 1760297 TP53 JASPAR yes 87828720
chr4 1760289 1760293 LFA1 TRANSFAC yes 49189417
chr4 1760289 1760293 LFA1 TRANSFAC yes 87828721
chr4 1760290 1760299 SNAI2 JASPAR yes 49189418
chr4 1760290 1760299 SNAI2 JASPAR yes 87828722
chr4 1760290 1760300 ID4 JASPAR yes 49189419
chr4 1760290 1760300 ID4 JASPAR yes 87828723
chr4 1760295 1760301 ZNF354C JASPAR yes 49189420
chr4 1760295 1760301 ZNF354C JASPAR yes 87828724
chr4 1760304 1760309 SP1 TRANSFAC yes 49189421
chr4 1760304 1760309 SP1 TRANSFAC yes 87828725
chr4 1760305 1760315 SREBF1 JASPAR yes 49189422
chr4 1760305 1760315 SREBF2 JASPAR yes 49189423
chr4 1760305 1760315 SREBF1 JASPAR yes 87828726
chr4 1760305 1760315 SREBF2 JASPAR yes 87828727
chr4 1760345 1760354 HIC2 JASPAR yes 49189424
chr4 1760345 1760354 HIC2 JASPAR yes 87828728
chr4 1760350 1760369 CTCF JASPAR yes 49189425
chr4 1760350 1760369 CTCF JASPAR yes 87828729
SNP sites on vista43893[chr4:1760039-1760352]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1760049 rs74524663 A G
CTCF REST SPI1 SPIC
7349106
chr4 1760096 rs148658872 G A
E2F6 MAZ NR3C1
7349107
chr4 1760209 rs144344118 G A
E2F4 NR3C1 SP1
7349108
chr4 1760225 rs147382849 C A,T
NR3C1
7349109
chr4 1760260 rs139532665 G C
EBF1 NR3C1 TFAP2A TFAP2B TFAP2C
7349110
Genes possibly regulated by vista43893[chr4:1760039-1760352]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1619642 1686029 - FAM53A ENSG00000174137.8 1686029 0.86 0.98 4458 25990
chr4 1694527 1714282 - SLBP ENSG00000163950.8 1714282 0.85 0.99 4459 54243
chr4 1717679 1723085 - TMEM129 ENSG00000168936.6 1723085 0.66 1.0 4460 63046
chr4 1723227 1746898 + TACC3 ENSG00000013810.14 1723227 0.91 1.0 4461 63188
chr4 1795034 1810599 + FGFR3 ENSG00000068078.13 1795034 0.91 1.0 4462 65318
chr4 1813206 1857974 - LETM1 ENSG00000168924.10 1857974 0.86 1.0 4463 2378
Expression level of Genes
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miRNAs possibly regulated by vista43893[chr4:1760039-1760352]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results