EnhancerDB
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  3. vista43894[chr4:1769544-1769746]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43894[chr4:1769544-1769746]
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Tissue distribution of vista43894
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Transcription factor that possibly regulate vista43894[chr4:1769544-1769746]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1769551 1770010 CTCF UCSC Txn Factor no Conserved 108531840
chr4 1769531 1769552 REST JASPAR yes 49189426
chr4 1769531 1769552 REST JASPAR yes 87830128
chr4 1769534 1769545 ESRRA JASPAR yes 49189427
chr4 1769534 1769545 ESRRA JASPAR yes 87830129
chr4 1769535 1769550 HNF4A JASPAR yes 49189428
chr4 1769535 1769550 HNF4A JASPAR yes 87830130
chr4 1769540 1769546 SOX10 JASPAR yes 49189429
chr4 1769540 1769546 SOX10 JASPAR yes 87830131
chr4 1769555 1769560 SP1 TRANSFAC yes 49189430
chr4 1769555 1769560 SP1 TRANSFAC yes 87830132
chr4 1769571 1769582 ESRRA JASPAR yes 49189431
chr4 1769571 1769582 ESRRA JASPAR yes 87830133
chr4 1769584 1769598 PLAG1 JASPAR yes 49189432
chr4 1769584 1769598 PLAG1 JASPAR yes 87830134
chr4 1769601 1769611 FIGLA JASPAR yes 49189433
chr4 1769601 1769611 TCF4 JASPAR yes 49189434
chr4 1769601 1769611 FIGLA JASPAR yes 87830135
chr4 1769601 1769611 TCF4 JASPAR yes 87830136
chr4 1769603 1769612 ZEB1 JASPAR yes 49189435
chr4 1769603 1769612 ZEB1 JASPAR yes 87830137
chr4 1769604 1769612 TBX15 JASPAR yes 49189436
chr4 1769604 1769612 TBX15 JASPAR yes 87830138
chr4 1769604 1769615 E2F6 JASPAR yes 49189437
chr4 1769604 1769615 E2F6 JASPAR yes 87830139
chr4 1769605 1769610 SP1 TRANSFAC yes 49189438
chr4 1769605 1769610 SP1 TRANSFAC yes 87830140
chr4 1769606 1769616 SP1 JASPAR yes 49189439
chr4 1769606 1769616 ZNF740 JASPAR yes 49189440
chr4 1769606 1769616 SP1 JASPAR yes 87830141
chr4 1769606 1769616 ZNF740 JASPAR yes 87830142
chr4 1769608 1769614 MAZ TRANSFAC yes 49189441
chr4 1769608 1769614 MAZ TRANSFAC yes 87830143
chr4 1769613 1769626 NFKB1 JASPAR yes 49189442
chr4 1769613 1769626 NFKB1 JASPAR yes 87830144
chr4 1769616 1769635 CTCF JASPAR yes 49189443
chr4 1769616 1769635 CTCF JASPAR yes 87830145
chr4 1769625 1769636 NFE2L2 JASPAR yes 49189444
chr4 1769625 1769636 NFE2L2 JASPAR yes 87830146
chr4 1769630 1769634 ESR1 TRANSFAC yes 49189445
chr4 1769630 1769634 ESR1 TRANSFAC yes 87830147
chr4 1769639 1769649 SP1 JASPAR yes 49189446
chr4 1769639 1769649 SP1 JASPAR yes 87830148
chr4 1769641 1769646 SP1 TRANSFAC yes 49189447
chr4 1769641 1769646 SP1 TRANSFAC yes 87830149
chr4 1769641 1769647 SP1 TRANSFAC yes 49189448
chr4 1769641 1769647 SP1 TRANSFAC yes 87830150
chr4 1769641 1769648 SP1 TRANSFAC yes 49189449
chr4 1769641 1769648 SP1 TRANSFAC yes 87830151
chr4 1769645 1769665 RREB1 JASPAR yes 49189450
chr4 1769645 1769665 RREB1 JASPAR yes 87830152
chr4 1769656 1769677 ZNF263 JASPAR yes 49189451
chr4 1769656 1769677 ZNF263 JASPAR yes 87830153
chr4 1769659 1769669 SP1 JASPAR yes 49189452
chr4 1769659 1769669 SP1 JASPAR yes 87830154
chr4 1769660 1769666 SP1 TRANSFAC yes 49189453
chr4 1769660 1769666 SP1 TRANSFAC yes 87830155
chr4 1769660 1769670 SP1 JASPAR yes 49189454
chr4 1769660 1769670 SP1 JASPAR yes 87830156
chr4 1769668 1769689 ZNF263 JASPAR yes 49189455
chr4 1769668 1769689 ZNF263 JASPAR yes 87830157
chr4 1769669 1769679 ZNF740 JASPAR yes 49189456
chr4 1769669 1769679 ZNF740 JASPAR yes 87830158
chr4 1769676 1769690 PLAG1 JASPAR yes 49189457
chr4 1769676 1769690 PLAG1 JASPAR yes 87830159
chr4 1769709 1769730 ZNF263 JASPAR yes 49189458
chr4 1769709 1769730 ZNF263 JASPAR yes 87830160
chr4 1769717 1769736 CTCF JASPAR yes 49189459
chr4 1769717 1769736 CTCF JASPAR yes 87830161
chr4 1769741 1769751 NFKB1 JASPAR yes 49189460
chr4 1769741 1769751 RELA JASPAR yes 49189461
chr4 1769741 1769751 REL JASPAR yes 49189462
chr4 1769741 1769751 NFKB1 JASPAR yes 87830162
chr4 1769741 1769751 RELA JASPAR yes 87830163
chr4 1769741 1769751 REL JASPAR yes 87830164
chr4 1769741 1769752 NFKB1 JASPAR yes 49189463
chr4 1769741 1769752 NFKB1 JASPAR yes 87830165
SNP sites on vista43894[chr4:1769544-1769746]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1769551 rs543504821 A G
CTCF REST
7349279
chr4 1769627 rs563782998 G A,T
CTCF NFE2L2
7349280
Genes possibly regulated by vista43894[chr4:1769544-1769746]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1619642 1686029 - FAM53A ENSG00000174137.8 1686029 0.86 0.98 4458 16485
chr4 1694527 1714282 - SLBP ENSG00000163950.8 1714282 0.85 0.99 4459 44738
chr4 1717679 1723085 - TMEM129 ENSG00000168936.6 1723085 0.66 1.0 4460 53541
chr4 1723227 1746898 + TACC3 ENSG00000013810.14 1723227 0.91 1.0 4461 53683
chr4 1795034 1810599 + FGFR3 ENSG00000068078.13 1795034 0.91 1.0 4462 74712
chr4 1813206 1857974 - LETM1 ENSG00000168924.10 1857974 0.86 1.0 4463 11772
Expression level of Genes
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miRNAs possibly regulated by vista43894[chr4:1769544-1769746]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results