EnhancerDB
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  3. vista43898[chr4:1865990-1866293]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43898[chr4:1865990-1866293]
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Tissue distribution of vista43898
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Transcription factor that possibly regulate vista43898[chr4:1865990-1866293]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1866014 1866024 SP1 JASPAR yes 49189556
chr4 1866020 1866025 SP1 TRANSFAC yes 49189557
chr4 1866024 1866045 ZNF263 JASPAR yes 49189558
chr4 1866027 1866038 E2F6 JASPAR yes 49189559
chr4 1866035 1866041 SP1 TRANSFAC yes 49189560
chr4 1866056 1866061 USF2 TRANSFAC yes 49189561
chr4 1866061 1866066 SP1 TRANSFAC yes 49189562
chr4 1866069 1866079 SP1 JASPAR yes 49189563
chr4 1866069 1866090 ZNF263 JASPAR yes 49189564
chr4 1866071 1866076 SP1 TRANSFAC yes 49189565
chr4 1866072 1866077 SP1 TRANSFAC yes 49189566
chr4 1866072 1866078 SP1 TRANSFAC yes 49189567
chr4 1866076 1866080 LFA1 TRANSFAC yes 49189568
chr4 1866080 1866091 TFAP2A JASPAR yes 49189569
chr4 1866080 1866091 TFAP2B JASPAR yes 49189570
chr4 1866080 1866091 TFAP2C JASPAR yes 49189571
chr4 1866114 1866122 GATA3 JASPAR yes 49189572
chr4 1866136 1866150 NR2F1 JASPAR yes 49189573
chr4 1866138 1866150 INSM1 JASPAR yes 49189574
chr4 1866142 1866157 HNF4G JASPAR yes 49189575
chr4 1866142 1866157 NR2C2 JASPAR yes 49189576
chr4 1866142 1866160 ESR2 JASPAR yes 49189577
chr4 1866143 1866157 RXRB JASPAR yes 49189578
chr4 1866143 1866157 RXRG JASPAR yes 49189579
chr4 1866143 1866158 HNF4A JASPAR yes 49189580
chr4 1866144 1866159 ESR2 JASPAR yes 49189581
chr4 1866145 1866149 ESR1 TRANSFAC yes 49189582
chr4 1866159 1866175 RFX2 JASPAR yes 49189583
chr4 1866159 1866175 RFX3 JASPAR yes 49189584
chr4 1866159 1866175 RFX4 JASPAR yes 49189585
chr4 1866159 1866175 RFX5 JASPAR yes 49189586
chr4 1866160 1866179 RFX2 JASPAR yes 49189587
chr4 1866185 1866202 RARA JASPAR yes 49189588
chr4 1866186 1866197 EBF1 JASPAR yes 49189589
chr4 1866186 1866199 TFAP2A JASPAR yes 49189590
chr4 1866186 1866199 TFAP2B JASPAR yes 49189591
chr4 1866186 1866199 TFAP2C JASPAR yes 49189592
chr4 1866186 1866200 EBF1 JASPAR yes 49189593
chr4 1866188 1866199 EBF1 JASPAR yes 49189594
chr4 1866188 1866202 PLAG1 JASPAR yes 49189595
chr4 1866193 1866204 NFKB1 JASPAR yes 49189596
chr4 1866203 1866216 TFAP2A JASPAR yes 49189597
chr4 1866203 1866216 TFAP2C JASPAR yes 49189598
chr4 1866204 1866219 ZIC4 JASPAR yes 49189599
chr4 1866217 1866222 TFAP2A TRANSFAC yes 49189600
chr4 1866217 1866223 MZF1 JASPAR yes 49189601
chr4 1866249 1866255 NFIC JASPAR yes 49189602
chr4 1866269 1866278 RARB TRANSFAC yes 49189603
chr4 1866271 1866275 ESR1 TRANSFAC yes 49189604
SNP sites on vista43898[chr4:1865990-1866293]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1866076 rs564147225 G A
LFA1 SP1 ZNF263
7349908
Genes possibly regulated by vista43898[chr4:1865990-1866293]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1795034 1810599 + FGFR3 ENSG00000068078.13 1795034 0.91 1.0 4462 29044
chr4 1813206 1857974 - LETM1 ENSG00000168924.10 1857974 0.86 1.0 4463 91984
chr4 1873151 1983934 + WHSC1 ENSG00000109685.13 1873151 0.88 1.0 4464 93142
Expression level of Genes
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miRNAs possibly regulated by vista43898[chr4:1865990-1866293]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results