EnhancerDB
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  3. vista43904[chr4:1972677-1973039]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43904[chr4:1972677-1973039]
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Tissue distribution of vista43904
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Transcription factor that possibly regulate vista43904[chr4:1972677-1973039]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1972684 1972691 SPIB JASPAR yes 49189775
chr4 1972684 1972691 SPIB JASPAR yes 87839211
chr4 1972721 1972734 DUXA JASPAR yes 49189776
chr4 1972721 1972734 DUXA JASPAR yes 87839212
chr4 1972722 1972733 DUX4 JASPAR yes 49189777
chr4 1972722 1972733 DUX4 JASPAR yes 87839213
chr4 1972723 1972728 NFY TRANSFAC yes 49189778
chr4 1972723 1972728 NFY TRANSFAC yes 87839214
chr4 1972727 1972738 CDX2 JASPAR yes 49189779
chr4 1972727 1972738 CDX2 JASPAR yes 87839215
chr4 1972728 1972739 HOXA10 JASPAR yes 49189780
chr4 1972728 1972739 HOXC11 JASPAR yes 49189781
chr4 1972728 1972739 HOXC12 JASPAR yes 49189782
chr4 1972728 1972739 HOXC13 JASPAR yes 49189783
chr4 1972728 1972739 HOXD12 JASPAR yes 49189784
chr4 1972728 1972739 HOXA10 JASPAR yes 87839216
chr4 1972728 1972739 HOXC11 JASPAR yes 87839217
chr4 1972728 1972739 HOXC12 JASPAR yes 87839218
chr4 1972728 1972739 HOXC13 JASPAR yes 87839219
chr4 1972728 1972739 HOXD12 JASPAR yes 87839220
chr4 1972729 1972738 CDX1 JASPAR yes 49189785
chr4 1972729 1972738 CDX1 JASPAR yes 87839221
chr4 1972729 1972739 HOXC10 JASPAR yes 49189786
chr4 1972729 1972739 HOXD11 JASPAR yes 49189787
chr4 1972729 1972739 HOXC10 JASPAR yes 87839222
chr4 1972729 1972739 HOXD11 JASPAR yes 87839223
chr4 1972758 1972763 ETS2 TRANSFAC yes 49189788
chr4 1972758 1972763 ETS2 TRANSFAC yes 87839224
chr4 1972758 1972772 TCF7L2 JASPAR yes 49189789
chr4 1972758 1972772 TCF7L2 JASPAR yes 87839225
chr4 1972758 1972773 LEF1 JASPAR yes 49189790
chr4 1972758 1972773 LEF1 JASPAR yes 87839226
chr4 1972759 1972774 AR JASPAR yes 49189791
chr4 1972759 1972774 AR JASPAR yes 87839227
chr4 1972763 1972769 SOX10 JASPAR yes 49189792
chr4 1972763 1972769 SOX10 JASPAR yes 87839228
chr4 1972767 1972780 HSF2 JASPAR yes 49189793
chr4 1972767 1972780 HSF2 JASPAR yes 87839229
chr4 1972772 1972785 HSF1 JASPAR yes 49189794
chr4 1972772 1972785 HSF2 JASPAR yes 49189795
chr4 1972772 1972785 HSF4 JASPAR yes 49189796
chr4 1972772 1972785 HSF1 JASPAR yes 87839230
chr4 1972772 1972785 HSF2 JASPAR yes 87839231
chr4 1972772 1972785 HSF4 JASPAR yes 87839232
chr4 1972779 1972794 MEF2C JASPAR yes 49189797
chr4 1972779 1972794 MEF2C JASPAR yes 87839233
chr4 1972780 1972795 MEF2A JASPAR yes 49189798
chr4 1972780 1972795 MEF2A JASPAR yes 87839234
chr4 1972781 1972793 MEF2A JASPAR yes 49189799
chr4 1972781 1972793 MEF2B JASPAR yes 49189800
chr4 1972781 1972793 MEF2D JASPAR yes 49189801
chr4 1972781 1972793 MEF2A JASPAR yes 87839235
chr4 1972781 1972793 MEF2B JASPAR yes 87839236
chr4 1972781 1972793 MEF2D JASPAR yes 87839237
chr4 1972782 1972792 MEF2A JASPAR yes 49189802
chr4 1972782 1972792 MEF2A JASPAR yes 87839238
chr4 1972784 1972799 SOX21 JASPAR yes 49189803
chr4 1972784 1972799 SOX21 JASPAR yes 87839239
chr4 1972789 1972806 ZNF410 JASPAR yes 49189804
chr4 1972789 1972806 ZNF410 JASPAR yes 87839240
chr4 1972795 1972804 THAP1 JASPAR yes 49189805
chr4 1972795 1972804 THAP1 JASPAR yes 87839241
chr4 1972798 1972802 LFA1 TRANSFAC yes 49189806
chr4 1972798 1972802 LFA1 TRANSFAC yes 87839242
chr4 1972802 1972816 MTF1 JASPAR yes 49189807
chr4 1972802 1972816 MTF1 JASPAR yes 87839243
chr4 1972812 1972823 FOSL2 JASPAR yes 49189808
chr4 1972812 1972823 FOSL2 JASPAR yes 87839244
chr4 1972818 1972835 BCL6B JASPAR yes 49189809
chr4 1972818 1972835 BCL6B JASPAR yes 87839245
chr4 1972828 1972849 LUN1 TRANSFAC yes 49189810
chr4 1972828 1972849 LUN1 TRANSFAC yes 87839246
chr4 1972852 1972857 SP1 TRANSFAC yes 49189811
chr4 1972852 1972857 SP1 TRANSFAC yes 87839247
chr4 1972853 1972858 SP1 TRANSFAC yes 49189812
chr4 1972853 1972858 SP1 TRANSFAC yes 87839248
chr4 1972858 1972864 ZNF354C JASPAR yes 49189813
chr4 1972858 1972864 ZNF354C JASPAR yes 87839249
chr4 1972894 1972898 LFA1 TRANSFAC yes 49189814
chr4 1972894 1972898 LFA1 TRANSFAC yes 87839250
chr4 1972912 1972916 NFE TRANSFAC yes 49189815
chr4 1972912 1972916 NFE TRANSFAC yes 87839251
chr4 1972916 1972926 ALX3 JASPAR yes 49189816
chr4 1972916 1972926 GSX2 JASPAR yes 49189817
chr4 1972916 1972926 MIXL1 JASPAR yes 49189818
chr4 1972916 1972926 ALX3 JASPAR yes 87839252
chr4 1972916 1972926 GSX2 JASPAR yes 87839253
chr4 1972916 1972926 MIXL1 JASPAR yes 87839254
chr4 1972917 1972925 ISX JASPAR yes 49189819
chr4 1972917 1972925 LHX9 JASPAR yes 49189820
chr4 1972917 1972925 LMX1B JASPAR yes 49189821
chr4 1972917 1972925 PRRX1 JASPAR yes 49189822
chr4 1972917 1972925 RAX2 JASPAR yes 49189823
chr4 1972917 1972925 SHOX JASPAR yes 49189824
chr4 1972917 1972925 UNCX JASPAR yes 49189825
chr4 1972917 1972925 ISX JASPAR yes 87839255
chr4 1972917 1972925 LHX9 JASPAR yes 87839256
chr4 1972917 1972925 LMX1B JASPAR yes 87839257
chr4 1972917 1972925 PRRX1 JASPAR yes 87839258
chr4 1972917 1972925 RAX2 JASPAR yes 87839259
chr4 1972917 1972925 SHOX JASPAR yes 87839260
chr4 1972917 1972925 UNCX JASPAR yes 87839261
chr4 1972922 1972928 TBP TRANSFAC yes 49189826
chr4 1972922 1972928 TBP TRANSFAC yes 87839262
chr4 1972947 1972953 NFIC JASPAR yes 49189827
chr4 1972947 1972953 NFIC JASPAR yes 87839263
SNP sites on vista43904[chr4:1972677-1973039]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1972800 rs73202835 G C
LFA1 THAP1 ZNF410
7350288
chr4 1972924 rs572211378 A T
ALX3 GSX2 ISX LHX9 LMX1B MIXL1 PRRX1 RAX2 SHOX TBP UNCX
7350289
chr4 1972962 rs187513553 C T no 7350290
chr4 1972963 rs543924325 G A no 7350291
Genes possibly regulated by vista43904[chr4:1972677-1973039]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1873151 1983934 + WHSC1 ENSG00000109685.13 1873151 0.88 1.0 4464 474
chr4 1984441 2043630 - NELFA ENSG00000185049.8 2043630 0.66 1.0 4465 29409
chr4 2043689 2045697 + C4orf48 ENSG00000243449.2 2043689 0.86 1.0 4466 29350
chr4 2061239 2070816 + NAT8L ENSG00000185818.7 2061239 0.93 1.0 4467 11800
Expression level of Genes
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miRNAs possibly regulated by vista43904[chr4:1972677-1973039]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results