EnhancerDB
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  3. vista43912[chr4:2283246-2284093]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43912[chr4:2283246-2284093]
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Tissue distribution of vista43912
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Transcription factor that possibly regulate vista43912[chr4:2283246-2284093]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2283204 2283678 CTCF UCSC Txn Factor no Conserved 108531844
chr4 2283233 2283254 ZNF263 JASPAR yes 49190037
chr4 2283233 2283254 ZNF263 JASPAR yes 87846201
chr4 2283235 2283250 PRDM1 JASPAR yes 49190038
chr4 2283235 2283250 PRDM1 JASPAR yes 87846203
chr4 2283246 2283256 SP1 JASPAR yes 49190039
chr4 2283246 2283256 SP1 JASPAR yes 87846204
chr4 2283247 2283252 ETS2 TRANSFAC yes 49190040
chr4 2283247 2283252 ETS2 TRANSFAC yes 87846205
chr4 2283253 2283258 SP1 TRANSFAC yes 49190041
chr4 2283253 2283258 SP1 TRANSFAC yes 87846206
chr4 2283253 2283271 ESR1 JASPAR yes 49190042
chr4 2283253 2283271 ESR1 JASPAR yes 87846207
chr4 2283254 2283269 ESR2 JASPAR yes 49190043
chr4 2283254 2283269 ESR2 JASPAR yes 87846208
chr4 2283265 2283281 SRF JASPAR yes 49190044
chr4 2283265 2283281 SRF JASPAR yes 87846209
chr4 2283268 2283280 SRF JASPAR yes 49190045
chr4 2283268 2283280 SRF JASPAR yes 87846210
chr4 2283271 2283275 TEAD2 TRANSFAC yes 49190046
chr4 2283271 2283275 TEAD2 TRANSFAC yes 87846211
chr4 2283293 2283296 MYB TRANSFAC yes 49190047
chr4 2283293 2283296 MYB TRANSFAC yes 87846212
chr4 2283313 2283316 MYB TRANSFAC yes 49190048
chr4 2283313 2283316 MYB TRANSFAC yes 87846213
chr4 2283333 2283337 LFA1 TRANSFAC yes 49190049
chr4 2283333 2283337 LFA1 TRANSFAC yes 87846214
chr4 2283333 2283353 ESR1 JASPAR yes 49190050
chr4 2283333 2283353 ESR1 JASPAR yes 87846215
chr4 2283338 2283353 ESR2 JASPAR yes 49190051
chr4 2283338 2283353 ESR2 JASPAR yes 87846216
chr4 2283342 2283357 JUND JASPAR yes 49190052
chr4 2283342 2283357 JUND JASPAR yes 87846217
chr4 2283343 2283356 JUN JASPAR yes 49190053
chr4 2283343 2283356 JUN JASPAR yes 87846218
chr4 2283344 2283358 ATF7 JASPAR yes 49190054
chr4 2283344 2283358 BATF3 JASPAR yes 49190055
chr4 2283344 2283358 ATF7 JASPAR yes 87846219
chr4 2283344 2283358 BATF3 JASPAR yes 87846220
chr4 2283344 2283362 RARA JASPAR yes 49190056
chr4 2283344 2283362 RARA JASPAR yes 87846221
chr4 2283345 2283357 JDP2 JASPAR yes 49190057
chr4 2283345 2283357 JDP2 JASPAR yes 87846222
chr4 2283345 2283360 JUND JASPAR yes 49190058
chr4 2283345 2283360 JUND JASPAR yes 87846223
chr4 2283346 2283359 DUXA JASPAR yes 49190059
chr4 2283346 2283359 JUN JASPAR yes 49190060
chr4 2283346 2283359 DUXA JASPAR yes 87846224
chr4 2283346 2283359 JUN JASPAR yes 87846225
chr4 2283347 2283355 CREB1 JASPAR yes 49190061
chr4 2283347 2283355 CREB1 JASPAR yes 87846226
chr4 2283367 2283371 H4TF2 TRANSFAC yes 49190062
chr4 2283367 2283371 H4TF2 TRANSFAC yes 87846227
chr4 2283393 2283398 TFAP2A TRANSFAC yes 49190063
chr4 2283393 2283398 TFAP2A TRANSFAC yes 87846228
chr4 2283393 2283399 MZF1 JASPAR yes 49190064
chr4 2283393 2283399 MZF1 JASPAR yes 87846229
chr4 2283394 2283404 GSC2 JASPAR yes 49190065
chr4 2283394 2283404 GSC JASPAR yes 49190066
chr4 2283394 2283404 GSC2 JASPAR yes 87846230
chr4 2283394 2283404 GSC JASPAR yes 87846231
chr4 2283395 2283403 OTX1 JASPAR yes 49190067
chr4 2283395 2283403 OTX2 JASPAR yes 49190068
chr4 2283395 2283403 RHOXF1 JASPAR yes 49190069
chr4 2283395 2283403 OTX1 JASPAR yes 87846232
chr4 2283395 2283403 OTX2 JASPAR yes 87846233
chr4 2283395 2283403 RHOXF1 JASPAR yes 87846234
chr4 2283395 2283404 PITX3 JASPAR yes 49190070
chr4 2283395 2283404 PITX3 JASPAR yes 87846235
chr4 2283395 2283408 DUXA JASPAR yes 49190071
chr4 2283395 2283408 DUXA JASPAR yes 87846236
chr4 2283424 2283428 LFA1 TRANSFAC yes 49190072
chr4 2283424 2283428 LFA1 TRANSFAC yes 87846237
chr4 2283435 2283450 RUNX2 JASPAR yes 49190073
chr4 2283435 2283450 RUNX2 JASPAR yes 87846238
chr4 2283436 2283445 RUNX2 JASPAR yes 49190074
chr4 2283436 2283445 RUNX2 JASPAR yes 87846239
chr4 2283436 2283446 RUNX3 JASPAR yes 49190075
chr4 2283436 2283446 RUNX3 JASPAR yes 87846240
chr4 2283438 2283457 CTCF JASPAR yes 49190076
chr4 2283438 2283457 CTCF JASPAR yes 87846241
chr4 2283439 2283454 ZIC3 JASPAR yes 49190077
chr4 2283439 2283454 ZIC4 JASPAR yes 49190078
chr4 2283439 2283454 ZIC3 JASPAR yes 87846242
chr4 2283439 2283454 ZIC4 JASPAR yes 87846243
chr4 2283440 2283454 GLIS2 JASPAR yes 49190079
chr4 2283440 2283454 ZIC1 JASPAR yes 49190080
chr4 2283440 2283454 GLIS2 JASPAR yes 87846244
chr4 2283440 2283454 ZIC1 JASPAR yes 87846245
chr4 2283449 2283453 LFA1 TRANSFAC yes 49190081
chr4 2283449 2283453 LFA1 TRANSFAC yes 87846246
chr4 2283478 2283493 SOX21 JASPAR yes 49190082
chr4 2283478 2283493 SOX21 JASPAR yes 87846247
chr4 2283495 2283506 FOXP2 JASPAR yes 49190083
chr4 2283495 2283506 FOXP2 JASPAR yes 87846248
chr4 2283496 2283504 FOXG1 JASPAR yes 49190084
chr4 2283496 2283504 FOXG1 JASPAR yes 87846249
chr4 2283501 2283506 GATA2 JASPAR yes 49190085
chr4 2283501 2283506 GATA2 JASPAR yes 87846250
chr4 2283514 2283519 MYC TRANSFAC yes 49190086
chr4 2283514 2283519 MYC TRANSFAC yes 87846251
chr4 2283546 2283560 PLAG1 JASPAR yes 49190087
chr4 2283546 2283560 PLAG1 JASPAR yes 87846252
chr4 2283614 2283618 YY1 TRANSFAC yes 49190088
chr4 2283614 2283618 YY1 TRANSFAC yes 87846253
chr4 2283615 2283624 SRY JASPAR yes 49190089
chr4 2283615 2283624 SRY JASPAR yes 87846254
chr4 2283617 2283620 MYB TRANSFAC yes 49190090
chr4 2283617 2283620 MYB TRANSFAC yes 87846255
chr4 2283645 2283654 HIC2 JASPAR yes 49190091
chr4 2283645 2283654 HIC2 JASPAR yes 87846256
chr4 2283655 2283659 H4TF2 TRANSFAC yes 49190092
chr4 2283655 2283659 H4TF2 TRANSFAC yes 87846257
chr4 2283671 2283679 EHF JASPAR yes 49190093
chr4 2283671 2283679 EHF JASPAR yes 87846258
chr4 2283697 2283712 RUNX2 JASPAR yes 49190094
chr4 2283697 2283712 RUNX2 JASPAR yes 87846259
chr4 2283734 2283755 ZNF263 JASPAR yes 49190095
chr4 2283734 2283755 ZNF263 JASPAR yes 87846260
chr4 2283756 2283767 ESRRA JASPAR yes 49190096
chr4 2283756 2283767 ESRRA JASPAR yes 87846261
chr4 2283760 2283764 LFA1 TRANSFAC yes 49190097
chr4 2283760 2283764 LFA1 TRANSFAC yes 87846262
chr4 2283761 2283771 HEY2 JASPAR yes 49190098
chr4 2283761 2283771 ID4 JASPAR yes 49190099
chr4 2283761 2283771 TCF4 JASPAR yes 49190100
chr4 2283761 2283771 HEY2 JASPAR yes 87846263
chr4 2283761 2283771 ID4 JASPAR yes 87846264
chr4 2283761 2283771 TCF4 JASPAR yes 87846265
chr4 2283762 2283771 SNAI2 JASPAR yes 49190101
chr4 2283762 2283771 SNAI2 JASPAR yes 87846266
chr4 2283763 2283768 USF2 TRANSFAC yes 49190102
chr4 2283763 2283768 USF2 TRANSFAC yes 87846267
chr4 2283772 2283778 NFIC JASPAR yes 49190103
chr4 2283772 2283778 NFIC JASPAR yes 87846268
chr4 2283778 2283789 ELK4 JASPAR yes 49190104
chr4 2283778 2283789 FLI1 JASPAR yes 49190105
chr4 2283778 2283789 ELK4 JASPAR yes 87846269
chr4 2283778 2283789 FLI1 JASPAR yes 87846270
chr4 2283779 2283789 GABPA JASPAR yes 49190106
chr4 2283779 2283789 GABPA JASPAR yes 87846271
chr4 2283779 2283792 ELF1 JASPAR yes 49190107
chr4 2283779 2283792 ELF1 JASPAR yes 87846272
chr4 2283791 2283806 RUNX2 JASPAR yes 49190108
chr4 2283791 2283806 RUNX2 JASPAR yes 87846273
chr4 2283835 2283841 ZNF354C JASPAR yes 49190109
chr4 2283835 2283841 ZNF354C JASPAR yes 87846274
chr4 2283835 2283855 PPARG JASPAR yes 49190110
chr4 2283835 2283855 PPARG JASPAR yes 87846275
chr4 2283837 2283854 RXRA JASPAR yes 49190111
chr4 2283837 2283854 RXRA JASPAR yes 87846276
chr4 2283843 2283848 ATF1 TRANSFAC yes 49190112
chr4 2283843 2283848 ATF1 TRANSFAC yes 87846277
chr4 2283861 2283873 ELF1 JASPAR yes 49190113
chr4 2283861 2283873 ELF1 JASPAR yes 87846278
chr4 2283861 2283874 ELF3 JASPAR yes 49190114
chr4 2283861 2283874 ELF3 JASPAR yes 87846279
chr4 2283862 2283873 SPDEF JASPAR yes 49190115
chr4 2283862 2283873 SPDEF JASPAR yes 87846280
chr4 2283863 2283872 ELK4 JASPAR yes 49190116
chr4 2283863 2283872 ELK4 JASPAR yes 87846281
chr4 2283863 2283873 ETV3 JASPAR yes 49190117
chr4 2283863 2283873 ETV3 JASPAR yes 87846282
chr4 2283892 2283902 NHLH1 JASPAR yes 49190118
chr4 2283892 2283902 NHLH1 JASPAR yes 87846283
chr4 2283895 2283908 SMAD2 JASPAR yes 49190119
chr4 2283895 2283908 SMAD2 JASPAR yes 87846284
chr4 2283930 2283941 FLI1 JASPAR yes 49190120
chr4 2283930 2283941 FLI1 JASPAR yes 87846285
chr4 2283931 2283944 ELF1 JASPAR yes 49190121
chr4 2283931 2283944 ELF1 JASPAR yes 87846286
chr4 2283944 2283950 MYC TRANSFAC yes 49190122
chr4 2283944 2283950 MYC TRANSFAC yes 87846287
chr4 2284015 2284030 FOXP1 JASPAR yes 49190123
chr4 2284015 2284030 FOXP1 JASPAR yes 87846288
chr4 2284040 2284048 FOXO3 JASPAR yes 49190124
chr4 2284040 2284048 FOXO3 JASPAR yes 87846289
chr4 2284083 2284093 TFAP4 JASPAR yes 49190125
chr4 2284083 2284093 TFAP4 JASPAR yes 87846290
chr4 2284086 2284097 NFE2L2 JASPAR yes 49190126
chr4 2284086 2284097 NFE2L2 JASPAR yes 87846291
SNP sites on vista43912[chr4:2283246-2284093]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2283343 rs141945196 C T
CTCF ESR1 ESR2 JUN JUND
7351043
chr4 2283380 rs187962932 C G
CTCF
7351044
chr4 2283589 rs4974668 G A
CTCF
7351045
chr4 2283607 rs140832678 G T
CTCF
7351046
chr4 2283615 rs113719139 C T
CTCF SRY YY1
7351047
chr4 2283623 rs17818992 A G
CTCF SRY
7351048
chr4 2283633 rs28701824 G A
CTCF
7351049
chr4 2283710 rs28714357 C G
RUNX2
7351050
chr4 2283751 rs147464214 G A
ZNF263
7351051
chr4 2283867 rs116124699 G A
ELF1 ELF3 ELK4 ETV3 SPDEF
7351052
chr4 2283895 rs139870840 C T
NHLH1 SMAD2
7351053
chr4 2283910 rs17132398 C T no 7351054
Genes possibly regulated by vista43912[chr4:2283246-2284093]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2073645 2243848 - POLN ENSG00000130997.12 2243848 0.78 0.99 4468 60602
chr4 2229191 2243891 - HAUS3 ENSG00000214367.3 2243891 0.73 0.97 4469 60645
chr4 2249159 2264021 - MXD4 ENSG00000123933.10 2264021 0.67 1.0 4470 80775
Expression level of Genes
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miRNAs possibly regulated by vista43912[chr4:2283246-2284093]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr4 2251818 2251836 - hsa-miR-4800-3p MIMAT0019979 2263835 0.0024142440398350266 0.0 0.0 1224
Expression level of miRNAs
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