EnhancerDB
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  3. vista43915[chr4:2365260-2365459]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43915[chr4:2365260-2365459]
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Tissue distribution of vista43915
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Transcription factor that possibly regulate vista43915[chr4:2365260-2365459]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2365105 2365345 USF1 UCSC Txn Factor no Conserved 108531846
chr4 2365246 2365513 CEBPB UCSC Txn Factor no Conserved 108531847
chr4 2365258 2365264 TCF4 TRANSFAC yes 49190213
chr4 2365258 2365264 TCF4 TRANSFAC yes 87850947
chr4 2365278 2365289 NRL JASPAR yes 49190214
chr4 2365278 2365289 NRL JASPAR yes 87850948
chr4 2365293 2365302 TFAP2A JASPAR yes 49190215
chr4 2365293 2365302 TFAP2A JASPAR yes 87850949
chr4 2365298 2365302 LFA1 TRANSFAC yes 49190216
chr4 2365298 2365302 LFA1 TRANSFAC yes 87850950
chr4 2365316 2365321 TFAP2A TRANSFAC yes 49190217
chr4 2365316 2365321 TFAP2A TRANSFAC yes 87850951
chr4 2365316 2365322 MZF1 JASPAR yes 49190218
chr4 2365316 2365322 MZF1 JASPAR yes 87850952
chr4 2365328 2365332 NFE TRANSFAC yes 49190219
chr4 2365328 2365332 NFE TRANSFAC yes 87850953
chr4 2365336 2365350 GATA2 JASPAR yes 49190220
chr4 2365336 2365350 GATA2 JASPAR yes 87850954
chr4 2365342 2365346 NFE TRANSFAC yes 49190221
chr4 2365342 2365346 NFE TRANSFAC yes 87850955
chr4 2365342 2365347 GATA1 TRANSFAC yes 49190222
chr4 2365342 2365347 GATA1 TRANSFAC yes 87850956
chr4 2365342 2365348 GATA3 JASPAR yes 49190223
chr4 2365342 2365348 GATA3 JASPAR yes 87850957
chr4 2365349 2365356 NKX3-1 JASPAR yes 49190224
chr4 2365349 2365356 NKX3-1 JASPAR yes 87850958
chr4 2365351 2365361 MEOX2 JASPAR yes 49190225
chr4 2365351 2365361 MEOX2 JASPAR yes 87850959
chr4 2365364 2365375 CEBPB JASPAR yes 49190226
chr4 2365364 2365376 DBP JASPAR yes 49190227
chr4 2365364 2365376 HLF JASPAR yes 49190228
chr4 2365364 2365376 TEF JASPAR yes 49190229
chr4 2365365 2365375 CEBPB JASPAR yes 49190230
chr4 2365365 2365375 CEBPD JASPAR yes 49190231
chr4 2365365 2365375 CEBPE JASPAR yes 49190232
chr4 2365365 2365375 CEBPG JASPAR yes 49190233
chr4 2365371 2365374 MYB TRANSFAC yes 49190234
chr4 2365384 2365398 RORA JASPAR yes 49190235
chr4 2365387 2365397 RORA JASPAR yes 49190236
chr4 2365392 2365396 ESR1 TRANSFAC yes 49190237
chr4 2365421 2365437 ZNF143 JASPAR yes 49190238
chr4 2365434 2365443 HIC2 JASPAR yes 49190239
chr4 2365435 2365447 TFAP2A JASPAR yes 49190240
chr4 2365435 2365447 TFAP2B JASPAR yes 49190241
chr4 2365435 2365447 TFAP2C JASPAR yes 49190242
chr4 2365435 2365450 TFAP2A JASPAR yes 49190243
SNP sites on vista43915[chr4:2365260-2365459]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2365272 rs116721276 A C
CEBPB USF1
7351599
chr4 2365312 rs116180819 G A
CEBPB USF1
7351600
chr4 2365365 rs1034398 T C
CEBPB CEBPD CEBPE CEBPG DBP HLF TEF
7351601
chr4 2365384 rs114970992 G A
CEBPB RORA
7351602
Genes possibly regulated by vista43915[chr4:2365260-2365459]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2271309 2420390 - ZFYVE28 ENSG00000159733.9 2420390 0.71 1.0 4471 45069
chr4 2451700 2464668 + RP11-503N18.3 ENSG00000249428.1 2451700 0.92 1.0 4472 13759
chr4 2463947 2627047 + RNF4 ENSG00000063978.11 2463947 0.69 0.99 4473 1512
Expression level of Genes
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miRNAs possibly regulated by vista43915[chr4:2365260-2365459]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results