EnhancerDB
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  3. vista43920[chr4:2390218-2390416]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43920[chr4:2390218-2390416]
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Tissue distribution of vista43920
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Transcription factor that possibly regulate vista43920[chr4:2390218-2390416]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2390223 2390243 TP53 JASPAR yes 49190406
chr4 2390223 2390243 TP53 JASPAR yes 87853020
chr4 2390225 2390240 HSF1 JASPAR yes 49190407
chr4 2390225 2390240 HSF1 JASPAR yes 87853021
chr4 2390226 2390239 HSF2 JASPAR yes 49190408
chr4 2390226 2390239 HSF2 JASPAR yes 87853022
chr4 2390292 2390303 USF1 JASPAR yes 49190409
chr4 2390292 2390303 USF2 JASPAR yes 49190410
chr4 2390292 2390303 USF1 JASPAR yes 87853023
chr4 2390292 2390303 USF2 JASPAR yes 87853024
chr4 2390303 2390318 MEF2A JASPAR yes 49190411
chr4 2390303 2390318 MEF2A JASPAR yes 87853025
chr4 2390305 2390317 MEF2A JASPAR yes 49190412
chr4 2390305 2390317 MEF2D JASPAR yes 49190413
chr4 2390305 2390317 MEF2A JASPAR yes 87853026
chr4 2390305 2390317 MEF2D JASPAR yes 87853027
chr4 2390307 2390311 YY1 TRANSFAC yes 49190414
chr4 2390307 2390311 YY1 TRANSFAC yes 87853028
chr4 2390326 2390333 SPIB JASPAR yes 49190415
chr4 2390326 2390333 SPIB JASPAR yes 87853029
chr4 2390326 2390347 ZNF263 JASPAR yes 49190416
chr4 2390326 2390347 ZNF263 JASPAR yes 87853030
chr4 2390327 2390335 EHF JASPAR yes 49190417
chr4 2390327 2390335 EHF JASPAR yes 87853031
chr4 2390331 2390336 ETS2 TRANSFAC yes 49190418
chr4 2390331 2390336 ETS2 TRANSFAC yes 87853032
chr4 2390352 2390367 AR JASPAR yes 49190419
chr4 2390352 2390367 AR JASPAR yes 87853033
chr4 2390384 2390390 ZNF354C JASPAR yes 49190420
chr4 2390384 2390390 ZNF354C JASPAR yes 87853034
SNP sites on vista43920[chr4:2390218-2390416]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2390230 rs548954012 T C
HSF1 HSF2 TP53
7351886
chr4 2390246 rs540743025 G A no 7351887
chr4 2390303 rs3135093 G A
MEF2A USF1 USF2
7351888
chr4 2390393 rs144893414 C T no 7351889
chr4 2390408 rs116905206 C T no 7351890
Genes possibly regulated by vista43920[chr4:2390218-2390416]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2271309 2420390 - ZFYVE28 ENSG00000159733.9 2420390 0.71 1.0 4471 70026
chr4 2451700 2464668 + RP11-503N18.3 ENSG00000249428.1 2451700 0.92 1.0 4472 38716
chr4 2463947 2627047 + RNF4 ENSG00000063978.11 2463947 0.69 0.99 4473 26469
Expression level of Genes
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miRNAs possibly regulated by vista43920[chr4:2390218-2390416]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results