EnhancerDB
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  3. vista43925[chr4:2415721-2415975]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43925[chr4:2415721-2415975]
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Tissue distribution of vista43925
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Transcription factor that possibly regulate vista43925[chr4:2415721-2415975]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2414503 2415825 POLR2A UCSC Txn Factor no Conserved 108531853
chr4 2414503 2415825 POLR2A UCSC Txn Factor no Conserved 108531854
chr4 2415737 2415755 NFYA JASPAR yes 49190684
chr4 2415737 2415755 NFYA JASPAR yes 87856329
chr4 2415752 2415757 GATA2 JASPAR yes 49190685
chr4 2415752 2415757 GATA2 JASPAR yes 87856330
chr4 2415764 2415773 SP1 TRANSFAC yes 49190686
chr4 2415764 2415773 SP1 TRANSFAC yes 87856331
chr4 2415765 2415775 SP1 JASPAR yes 49190687
chr4 2415765 2415775 SP1 TRANSFAC yes 49190688
chr4 2415765 2415775 SP1 JASPAR yes 87856332
chr4 2415765 2415775 SP1 TRANSFAC yes 87856333
chr4 2415766 2415776 SP1 JASPAR yes 49190689
chr4 2415766 2415776 SP1 JASPAR yes 87856334
chr4 2415767 2415783 GLIS1 JASPAR yes 49190690
chr4 2415767 2415783 GLIS1 JASPAR yes 87856335
chr4 2415768 2415778 ZNF740 JASPAR yes 49190691
chr4 2415768 2415778 ZNF740 JASPAR yes 87856336
chr4 2415768 2415782 GLIS2 JASPAR yes 49190692
chr4 2415768 2415782 GLIS3 JASPAR yes 49190693
chr4 2415768 2415782 ZIC1 JASPAR yes 49190694
chr4 2415768 2415782 GLIS2 JASPAR yes 87856337
chr4 2415768 2415782 GLIS3 JASPAR yes 87856338
chr4 2415768 2415782 ZIC1 JASPAR yes 87856339
chr4 2415781 2415786 SP1 TRANSFAC yes 49190695
chr4 2415781 2415786 SP1 TRANSFAC yes 87856340
chr4 2415784 2415791 SP1 TRANSFAC yes 49190696
chr4 2415784 2415791 SP1 TRANSFAC yes 87856341
chr4 2415784 2415794 SP1 JASPAR yes 49190697
chr4 2415784 2415794 SP1 JASPAR yes 87856342
chr4 2415785 2415792 SP1 TRANSFAC yes 49190698
chr4 2415785 2415792 SP1 TRANSFAC yes 87856343
chr4 2415786 2415791 SP1 TRANSFAC yes 49190699
chr4 2415786 2415791 SP1 TRANSFAC yes 87856344
chr4 2415786 2415792 SP1 TRANSFAC yes 49190700
chr4 2415786 2415792 SP1 TRANSFAC yes 87856345
chr4 2415786 2415793 SP1 TRANSFAC yes 49190701
chr4 2415786 2415793 SP1 TRANSFAC yes 87856346
chr4 2415801 2415820 RFX2 JASPAR yes 49190702
chr4 2415801 2415820 RFX2 JASPAR yes 87856347
chr4 2415818 2415823 SP1 TRANSFAC yes 49190703
chr4 2415818 2415823 SP1 TRANSFAC yes 87856348
chr4 2415818 2415824 SP1 TRANSFAC yes 49190704
chr4 2415818 2415824 SP1 TRANSFAC yes 87856349
chr4 2415830 2415840 FIGLA JASPAR yes 49190705
chr4 2415830 2415840 FIGLA JASPAR yes 87856350
chr4 2415830 2415841 USF2 JASPAR yes 49190706
chr4 2415830 2415841 USF2 JASPAR yes 87856351
chr4 2415835 2415850 HNF4A JASPAR yes 49190707
chr4 2415835 2415850 HNF4A JASPAR yes 87856352
chr4 2415841 2415856 HNF4G JASPAR yes 49190708
chr4 2415841 2415856 HNF4G JASPAR yes 87856353
chr4 2415842 2415857 HNF4A JASPAR yes 49190709
chr4 2415842 2415857 HNF4A JASPAR yes 87856354
chr4 2415854 2415869 NFYB JASPAR yes 49190710
chr4 2415854 2415869 NFYB JASPAR yes 87856355
chr4 2415855 2415874 CTCF JASPAR yes 49190711
chr4 2415855 2415874 CTCF JASPAR yes 87856356
chr4 2415856 2415872 NFYA JASPAR yes 49190712
chr4 2415856 2415872 NFYA JASPAR yes 87856357
chr4 2415857 2415875 NFYA JASPAR yes 49190713
chr4 2415857 2415875 NFYA JASPAR yes 87856358
chr4 2415861 2415865 H1TF2 TRANSFAC yes 49190714
chr4 2415861 2415865 NFE TRANSFAC yes 49190715
chr4 2415861 2415865 SRF TRANSFAC yes 49190716
chr4 2415861 2415865 H1TF2 TRANSFAC yes 87856359
chr4 2415861 2415865 NFE TRANSFAC yes 87856360
chr4 2415861 2415865 SRF TRANSFAC yes 87856361
chr4 2415866 2415870 LFA1 TRANSFAC yes 49190717
chr4 2415866 2415870 LFA1 TRANSFAC yes 87856362
chr4 2415871 2415890 REST JASPAR yes 49190718
chr4 2415871 2415890 REST JASPAR yes 87856363
chr4 2415918 2415928 SREBF2 JASPAR yes 49190719
chr4 2415918 2415928 SREBF2 JASPAR yes 87856364
chr4 2415918 2415929 USF1 JASPAR yes 49190720
chr4 2415918 2415929 USF2 JASPAR yes 49190721
chr4 2415918 2415929 USF1 JASPAR yes 87856365
chr4 2415918 2415929 USF2 JASPAR yes 87856366
chr4 2415929 2415939 SP1 JASPAR yes 49190722
chr4 2415929 2415939 SP1 JASPAR yes 87856367
chr4 2415939 2415942 MYB TRANSFAC yes 49190723
chr4 2415939 2415942 MYB TRANSFAC yes 87856368
chr4 2415950 2415970 PPARG JASPAR yes 49190724
chr4 2415950 2415970 PPARG JASPAR yes 87856369
chr4 2415952 2415965 ELF1 JASPAR yes 49190725
chr4 2415952 2415965 ELF1 JASPAR yes 87856370
chr4 2415952 2415967 ESR2 JASPAR yes 49190726
chr4 2415952 2415967 ESR2 JASPAR yes 87856371
chr4 2415953 2415957 LFA1 TRANSFAC yes 49190727
chr4 2415953 2415957 LFA1 TRANSFAC yes 87856372
chr4 2415955 2415966 ELK4 JASPAR yes 49190728
chr4 2415955 2415966 FLI1 JASPAR yes 49190729
chr4 2415955 2415966 ELK4 JASPAR yes 87856373
chr4 2415955 2415966 FLI1 JASPAR yes 87856374
chr4 2415956 2415964 EHF JASPAR yes 49190730
chr4 2415956 2415964 FEV JASPAR yes 49190731
chr4 2415956 2415964 EHF JASPAR yes 87856375
chr4 2415956 2415964 FEV JASPAR yes 87856376
chr4 2415957 2415964 SPI1 JASPAR yes 49190732
chr4 2415957 2415964 SPI1 JASPAR yes 87856377
chr4 2415957 2415967 NFKB1 JASPAR yes 49190733
chr4 2415957 2415967 NFKB1 JASPAR yes 87856378
SNP sites on vista43925[chr4:2415721-2415975]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2415806 rs73074347 C T
POLR2A RFX2
7352343
chr4 2415912 rs552509513 G A no 7352344
chr4 2415959 rs73205471 G A,C
EHF ELF1 ELK4 ESR2 FEV FLI1 NFKB1 PPARG SPI1
7352345
Genes possibly regulated by vista43925[chr4:2415721-2415975]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2271309 2420390 - ZFYVE28 ENSG00000159733.9 2420390 0.71 1.0 4471 95585
chr4 2451700 2464668 + RP11-503N18.3 ENSG00000249428.1 2451700 0.92 1.0 4472 64275
chr4 2463947 2627047 + RNF4 ENSG00000063978.11 2463947 0.69 0.99 4473 52028
Expression level of Genes
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miRNAs possibly regulated by vista43925[chr4:2415721-2415975]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results