EnhancerDB
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  3. vista43936[chr4:2801486-2801785]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43936[chr4:2801486-2801785]
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Tissue distribution of vista43936
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Transcription factor that possibly regulate vista43936[chr4:2801486-2801785]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2801519 2801531 TFAP2A JASPAR yes 49191461
chr4 2801519 2801531 TFAP2A JASPAR yes 87876494
chr4 2801519 2801532 TFAP2A JASPAR yes 49191462
chr4 2801519 2801532 TFAP2B JASPAR yes 49191463
chr4 2801519 2801532 TFAP2C JASPAR yes 49191464
chr4 2801519 2801532 TFAP2A JASPAR yes 87876495
chr4 2801519 2801532 TFAP2B JASPAR yes 87876496
chr4 2801519 2801532 TFAP2C JASPAR yes 87876497
chr4 2801519 2801534 ZIC3 JASPAR yes 49191465
chr4 2801519 2801534 ZIC4 JASPAR yes 49191466
chr4 2801519 2801534 ZIC3 JASPAR yes 87876498
chr4 2801519 2801534 ZIC4 JASPAR yes 87876499
chr4 2801520 2801533 TFAP2A JASPAR yes 49191467
chr4 2801520 2801533 TFAP2B JASPAR yes 49191468
chr4 2801520 2801533 TFAP2C JASPAR yes 49191469
chr4 2801520 2801533 TFAP2A JASPAR yes 87876500
chr4 2801520 2801533 TFAP2B JASPAR yes 87876501
chr4 2801520 2801533 TFAP2C JASPAR yes 87876502
chr4 2801520 2801534 GLIS2 JASPAR yes 49191470
chr4 2801520 2801534 ZIC1 JASPAR yes 49191471
chr4 2801520 2801534 GLIS2 JASPAR yes 87876503
chr4 2801520 2801534 ZIC1 JASPAR yes 87876504
chr4 2801527 2801538 NFKB1 JASPAR yes 49191472
chr4 2801527 2801538 NFKB1 JASPAR yes 87876505
chr4 2801529 2801534 SP1 TRANSFAC yes 49191473
chr4 2801529 2801534 SP1 TRANSFAC yes 87876506
chr4 2801539 2801549 MZF1 JASPAR yes 49191474
chr4 2801539 2801549 MZF1 JASPAR yes 87876507
chr4 2801539 2801560 ZNF263 JASPAR yes 49191475
chr4 2801539 2801560 ZNF263 JASPAR yes 87876508
chr4 2801542 2801563 ZNF263 JASPAR yes 49191476
chr4 2801542 2801563 ZNF263 JASPAR yes 87876509
chr4 2801551 2801561 SP1 JASPAR yes 49191477
chr4 2801551 2801561 SP1 JASPAR yes 87876510
chr4 2801552 2801559 CEBPA TRANSFAC yes 49191478
chr4 2801552 2801559 CEBPA TRANSFAC yes 87876511
chr4 2801557 2801562 SP1 TRANSFAC yes 49191479
chr4 2801557 2801562 SP1 TRANSFAC yes 87876512
chr4 2801581 2801594 SMAD2 JASPAR yes 49191480
chr4 2801581 2801594 SMAD2 JASPAR yes 87876513
chr4 2801603 2801618 PRDM1 JASPAR yes 49191481
chr4 2801603 2801618 PRDM1 JASPAR yes 87876514
chr4 2801608 2801618 SP1 JASPAR yes 49191482
chr4 2801608 2801618 SP1 JASPAR yes 87876515
chr4 2801625 2801630 SP1 TRANSFAC yes 49191483
chr4 2801625 2801630 SP1 TRANSFAC yes 87876516
chr4 2801627 2801642 TFAP2A JASPAR yes 49191484
chr4 2801627 2801642 TFAP2C JASPAR yes 49191485
chr4 2801627 2801642 TFAP2A JASPAR yes 87876517
chr4 2801627 2801642 TFAP2C JASPAR yes 87876518
chr4 2801628 2801633 SP1 TRANSFAC yes 49191486
chr4 2801628 2801633 SP1 TRANSFAC yes 87876519
chr4 2801629 2801644 TFAP2A JASPAR yes 49191487
chr4 2801629 2801644 TFAP2A JASPAR yes 87876520
chr4 2801631 2801640 TFAP2A JASPAR yes 49191488
chr4 2801631 2801640 TFAP2A JASPAR yes 87876521
chr4 2801635 2801649 PLAG1 JASPAR yes 49191489
chr4 2801635 2801649 PLAG1 JASPAR yes 87876522
chr4 2801643 2801648 SP1 TRANSFAC yes 49191490
chr4 2801643 2801648 SP1 TRANSFAC yes 87876523
chr4 2801664 2801676 BHLHE23 JASPAR yes 49191491
chr4 2801664 2801676 BHLHE23 JASPAR yes 87876524
chr4 2801665 2801675 NEUROG2 JASPAR yes 49191492
chr4 2801665 2801675 NEUROG2 JASPAR yes 87876525
chr4 2801671 2801679 FOXO3 JASPAR yes 49191493
chr4 2801671 2801679 FOXO3 JASPAR yes 87876526
chr4 2801710 2801720 BHLHE22 JASPAR yes 49191494
chr4 2801710 2801720 BHLHE22 JASPAR yes 87876527
chr4 2801715 2801720 SP1 TRANSFAC yes 49191495
chr4 2801715 2801720 SP1 TRANSFAC yes 87876528
chr4 2801756 2801766 SP1 JASPAR yes 49191496
chr4 2801756 2801766 SP1 JASPAR yes 87876529
chr4 2801757 2801762 SP1 TRANSFAC yes 49191497
chr4 2801757 2801762 SP1 TRANSFAC yes 87876530
chr4 2801758 2801763 SP1 TRANSFAC yes 49191498
chr4 2801758 2801763 SP1 TRANSFAC yes 87876531
chr4 2801758 2801764 SP1 TRANSFAC yes 49191499
chr4 2801758 2801764 SP1 TRANSFAC yes 87876532
chr4 2801767 2801772 TFAP2A TRANSFAC yes 49191500
chr4 2801767 2801772 TFAP2A TRANSFAC yes 87876533
chr4 2801767 2801773 MZF1 JASPAR yes 49191501
chr4 2801767 2801773 MZF1 JASPAR yes 87876534
chr4 2801768 2801778 SP1 JASPAR yes 49191502
chr4 2801768 2801778 SP1 JASPAR yes 87876535
chr4 2801776 2801781 SP1 TRANSFAC yes 49191503
chr4 2801776 2801781 SP1 TRANSFAC yes 87876536
SNP sites on vista43936[chr4:2801486-2801785]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2801509 rs1913447 C T no 7354529
chr4 2801519 rs376877597 A AT
TFAP2A TFAP2B TFAP2C ZIC3 ZIC4
7354530
chr4 2801519 rs551324974 A AT
TFAP2A TFAP2B TFAP2C ZIC3 ZIC4
7354531
chr4 2801594 rs190120578 C A
SMAD2
7354532
chr4 2801646 rs543518164 T G
PLAG1 SP1
7354533
chr4 2801647 rs563155774 G T
PLAG1 SP1
7354534
chr4 2801708 rs193087740 C T no 7354535
chr4 2801717 rs542562936 C T
BHLHE22 SP1
7354536
Genes possibly regulated by vista43936[chr4:2801486-2801785]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2743375 2758103 - TNIP2 ENSG00000168884.10 2758103 0.6 1.0 4475 56617
chr4 2794750 2842825 + SH3BP2 ENSG00000087266.11 2794750 0.78 1.0 4476 93264
chr4 2845584 2931803 + ADD1 ENSG00000087274.12 2845584 0.65 1.0 4477 56201
Expression level of Genes
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miRNAs possibly regulated by vista43936[chr4:2801486-2801785]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results