EnhancerDB
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  3. vista43937[chr4:2802009-2802382]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43937[chr4:2802009-2802382]
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Tissue distribution of vista43937
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Transcription factor that possibly regulate vista43937[chr4:2802009-2802382]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2802012 2802016 H4TF2 TRANSFAC yes 49191504
chr4 2802012 2802016 H4TF2 TRANSFAC yes 87876575
chr4 2802024 2802038 EBF1 JASPAR yes 49191505
chr4 2802024 2802038 EBF1 JASPAR yes 87876576
chr4 2802026 2802037 EBF1 JASPAR yes 49191506
chr4 2802026 2802037 EBF1 JASPAR yes 87876577
chr4 2802030 2802035 TFAP2A TRANSFAC yes 49191507
chr4 2802030 2802035 TFAP2A TRANSFAC yes 87876578
chr4 2802030 2802036 MZF1 JASPAR yes 49191508
chr4 2802030 2802036 MZF1 JASPAR yes 87876579
chr4 2802031 2802046 PRDM1 JASPAR yes 49191509
chr4 2802031 2802046 PRDM1 JASPAR yes 87876580
chr4 2802032 2802038 MAZ TRANSFAC yes 49191510
chr4 2802032 2802038 MAZ TRANSFAC yes 87876581
chr4 2802032 2802043 E2F6 JASPAR yes 49191511
chr4 2802032 2802043 E2F6 JASPAR yes 87876582
chr4 2802040 2802053 NFKB1 JASPAR yes 49191512
chr4 2802040 2802053 NFKB2 JASPAR yes 49191513
chr4 2802040 2802053 NFKB1 JASPAR yes 87876583
chr4 2802040 2802053 NFKB2 JASPAR yes 87876584
chr4 2802041 2802052 NFKB1 JASPAR yes 49191514
chr4 2802041 2802052 NFKB1 JASPAR yes 87876585
chr4 2802041 2802058 RARA JASPAR yes 49191515
chr4 2802041 2802058 RARA JASPAR yes 87876586
chr4 2802042 2802046 LFA1 TRANSFAC yes 49191516
chr4 2802042 2802046 LFA1 TRANSFAC yes 87876587
chr4 2802042 2802052 NFKB1 JASPAR yes 49191517
chr4 2802042 2802052 NFKB1 JASPAR yes 87876588
chr4 2802047 2802053 MZF1 JASPAR yes 49191518
chr4 2802047 2802053 MZF1 JASPAR yes 87876589
chr4 2802071 2802082 EBF1 JASPAR yes 49191519
chr4 2802071 2802082 EBF1 JASPAR yes 87876590
chr4 2802072 2802078 MZF1 JASPAR yes 49191520
chr4 2802072 2802078 MZF1 JASPAR yes 87876591
chr4 2802105 2802109 NFE TRANSFAC yes 49191521
chr4 2802105 2802109 NFE TRANSFAC yes 87876592
chr4 2802119 2802125 NFE2 TRANSFAC yes 49191522
chr4 2802119 2802125 NFE2 TRANSFAC yes 87876593
chr4 2802132 2802152 TP53 JASPAR yes 49191523
chr4 2802132 2802152 TP53 JASPAR yes 87876594
chr4 2802140 2802151 NRF1 JASPAR yes 49191524
chr4 2802140 2802151 NRF1 JASPAR yes 87876595
chr4 2802144 2802150 NFE2 TRANSFAC yes 49191525
chr4 2802144 2802150 NFE2 TRANSFAC yes 87876596
chr4 2802163 2802182 CTCF JASPAR yes 49191526
chr4 2802163 2802182 CTCF JASPAR yes 87876597
chr4 2802173 2802187 PLAG1 JASPAR yes 49191527
chr4 2802173 2802187 PLAG1 JASPAR yes 87876598
chr4 2802175 2802188 TFAP2A JASPAR yes 49191528
chr4 2802175 2802188 TFAP2B JASPAR yes 49191529
chr4 2802175 2802188 TFAP2C JASPAR yes 49191530
chr4 2802175 2802188 TFAP2A JASPAR yes 87876599
chr4 2802175 2802188 TFAP2B JASPAR yes 87876600
chr4 2802175 2802188 TFAP2C JASPAR yes 87876601
chr4 2802175 2802190 TFAP2C JASPAR yes 49191531
chr4 2802175 2802190 TFAP2C JASPAR yes 87876602
chr4 2802176 2802185 TFAP2A JASPAR yes 49191532
chr4 2802176 2802185 TFAP2A JASPAR yes 87876603
chr4 2802183 2802187 LFA1 TRANSFAC yes 49191533
chr4 2802183 2802187 LFA1 TRANSFAC yes 87876604
chr4 2802194 2802199 SP1 TRANSFAC yes 49191534
chr4 2802194 2802199 SP1 TRANSFAC yes 87876605
chr4 2802208 2802226 ESR1 JASPAR yes 49191535
chr4 2802208 2802226 ESR1 JASPAR yes 87876606
chr4 2802273 2802278 SP1 TRANSFAC yes 49191536
chr4 2802273 2802278 SP1 TRANSFAC yes 87876607
chr4 2802273 2802279 SP1 TRANSFAC yes 49191537
chr4 2802273 2802279 SP1 TRANSFAC yes 87876608
chr4 2802273 2802280 SP1 TRANSFAC yes 49191538
chr4 2802273 2802280 SP1 TRANSFAC yes 87876609
chr4 2802275 2802285 ZNF740 JASPAR yes 49191539
chr4 2802275 2802285 ZNF740 JASPAR yes 87876610
chr4 2802275 2802290 ZIC3 JASPAR yes 49191540
chr4 2802275 2802290 ZIC3 JASPAR yes 87876611
chr4 2802276 2802286 SP1 JASPAR yes 49191541
chr4 2802276 2802286 ZNF740 JASPAR yes 49191542
chr4 2802276 2802286 SP1 JASPAR yes 87876612
chr4 2802276 2802286 ZNF740 JASPAR yes 87876613
chr4 2802277 2802287 SP1 JASPAR yes 49191543
chr4 2802277 2802287 ZNF740 JASPAR yes 49191544
chr4 2802277 2802287 SP1 JASPAR yes 87876614
chr4 2802277 2802287 ZNF740 JASPAR yes 87876615
chr4 2802278 2802291 TFAP2A JASPAR yes 49191545
chr4 2802278 2802291 TFAP2B JASPAR yes 49191546
chr4 2802278 2802291 TFAP2C JASPAR yes 49191547
chr4 2802278 2802291 TFAP2A JASPAR yes 87876616
chr4 2802278 2802291 TFAP2B JASPAR yes 87876617
chr4 2802278 2802291 TFAP2C JASPAR yes 87876618
chr4 2802279 2802291 TFAP2A JASPAR yes 49191548
chr4 2802279 2802291 TFAP2B JASPAR yes 49191549
chr4 2802279 2802291 TFAP2C JASPAR yes 49191550
chr4 2802279 2802291 TFAP2A JASPAR yes 87876619
chr4 2802279 2802291 TFAP2B JASPAR yes 87876620
chr4 2802279 2802291 TFAP2C JASPAR yes 87876621
chr4 2802281 2802290 TFAP2A JASPAR yes 49191551
chr4 2802281 2802290 TFAP2A JASPAR yes 87876622
chr4 2802307 2802316 NKX2-8 JASPAR yes 49191552
chr4 2802307 2802316 NKX2-8 JASPAR yes 87876623
chr4 2802310 2802319 ZEB1 JASPAR yes 49191553
chr4 2802310 2802319 ZEB1 JASPAR yes 87876624
chr4 2802313 2802318 USF2 TRANSFAC yes 49191554
chr4 2802313 2802318 USF2 TRANSFAC yes 87876625
chr4 2802319 2802333 PLAG1 JASPAR yes 49191555
chr4 2802319 2802333 PLAG1 JASPAR yes 87876626
chr4 2802322 2802333 EBF1 JASPAR yes 49191556
chr4 2802322 2802333 EBF1 JASPAR yes 87876627
chr4 2802326 2802331 TFAP2A TRANSFAC yes 49191557
chr4 2802326 2802331 TFAP2A TRANSFAC yes 87876628
chr4 2802326 2802332 MZF1 JASPAR yes 49191558
chr4 2802326 2802332 MZF1 JASPAR yes 87876629
chr4 2802334 2802338 NFE TRANSFAC yes 49191559
chr4 2802334 2802338 NFE TRANSFAC yes 87876630
chr4 2802357 2802362 SP1 TRANSFAC yes 49191560
chr4 2802357 2802362 SP1 TRANSFAC yes 87876631
chr4 2802368 2802378 SP1 JASPAR yes 49191561
chr4 2802368 2802378 SP1 JASPAR yes 87876632
chr4 2802368 2802389 ZNF263 JASPAR yes 49191562
chr4 2802368 2802389 ZNF263 JASPAR yes 87876633
chr4 2802369 2802390 ZNF263 JASPAR yes 49191563
chr4 2802369 2802390 ZNF263 JASPAR yes 87876634
chr4 2802375 2802379 LFA1 TRANSFAC yes 49191564
chr4 2802375 2802379 LFA1 TRANSFAC yes 87876635
chr4 2802379 2802399 TP63 JASPAR yes 49191565
chr4 2802379 2802399 TP63 JASPAR yes 87876636
SNP sites on vista43937[chr4:2802009-2802382]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2802113 rs393635 A G no 7354540
chr4 2802184 rs116590203 G A
LFA1 PLAG1 TFAP2A TFAP2B TFAP2C
7354541
chr4 2802197 rs567210318 C T
SP1
7354542
chr4 2802204 rs114264509 G T no 7354543
chr4 2802276 rs34241051 GC G
SP1 ZIC3 ZNF740
7354544
chr4 2802276 rs573652838 G A
SP1 ZIC3 ZNF740
7354545
chr4 2802276 rs796682163 GC G
SP1 ZIC3 ZNF740
7354546
chr4 2802283 rs542650087 C A
SP1 TFAP2A TFAP2B TFAP2C ZIC3 ZNF740
7354547
chr4 2802333 rs113289909 G A
EBF1 PLAG1
7354548
Genes possibly regulated by vista43937[chr4:2802009-2802382]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2743375 2758103 - TNIP2 ENSG00000168884.10 2758103 0.6 1.0 4475 56094
chr4 2794750 2842825 + SH3BP2 ENSG00000087266.11 2794750 0.78 1.0 4476 92741
chr4 2845584 2931803 + ADD1 ENSG00000087274.12 2845584 0.65 1.0 4477 56798
Expression level of Genes
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miRNAs possibly regulated by vista43937[chr4:2802009-2802382]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results