EnhancerDB
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  3. vista43942[chr4:3047149-3047582]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43942[chr4:3047149-3047582]
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Tissue distribution of vista43942
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Transcription factor that possibly regulate vista43942[chr4:3047149-3047582]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3047177 3047533 MAX UCSC Txn Factor no Conserved 108531888
chr4 3047211 3047546 RUNX3 UCSC Txn Factor no Conserved 108531889
chr4 3047151 3047162 FOXH1 JASPAR yes 49191774
chr4 3047151 3047162 FOXH1 JASPAR yes 87886874
chr4 3047169 3047182 ELF1 JASPAR yes 49191775
chr4 3047169 3047182 ELF1 JASPAR yes 87886875
chr4 3047175 3047189 STAT1 JASPAR yes 49191776
chr4 3047175 3047189 STAT1 JASPAR yes 87886876
chr4 3047193 3047203 MZF1 JASPAR yes 49191777
chr4 3047193 3047203 MZF1 JASPAR yes 87886877
chr4 3047195 3047209 PLAG1 JASPAR yes 49191778
chr4 3047195 3047209 PLAG1 JASPAR yes 87886878
chr4 3047217 3047230 POU2F2 JASPAR yes 49191779
chr4 3047217 3047230 POU2F2 JASPAR yes 87886879
chr4 3047218 3047230 POU3F1 JASPAR yes 49191780
chr4 3047218 3047230 POU3F1 JASPAR yes 87886880
chr4 3047219 3047231 POU2F1 JASPAR yes 49191781
chr4 3047219 3047231 POU2F1 JASPAR yes 87886881
chr4 3047220 3047229 POU3F4 JASPAR yes 49191782
chr4 3047220 3047229 POU3F4 JASPAR yes 87886882
chr4 3047221 3047229 FOXL1 JASPAR yes 49191783
chr4 3047221 3047229 FOXL1 JASPAR yes 87886883
chr4 3047250 3047263 POU2F2 JASPAR yes 49191784
chr4 3047250 3047263 POU2F2 JASPAR yes 87886884
chr4 3047306 3047319 NR2F1 JASPAR yes 49191785
chr4 3047306 3047319 NR2F1 JASPAR yes 87886885
chr4 3047308 3047314 ESR1 TRANSFAC yes 49191786
chr4 3047308 3047314 ESR1 TRANSFAC yes 87886886
chr4 3047310 3047314 ESR1 TRANSFAC yes 49191787
chr4 3047310 3047314 ESR1 TRANSFAC yes 87886887
chr4 3047310 3047320 MAX JASPAR yes 49191788
chr4 3047310 3047320 MAX JASPAR yes 87886888
chr4 3047310 3047321 USF1 JASPAR yes 49191789
chr4 3047310 3047321 USF2 JASPAR yes 49191790
chr4 3047310 3047321 USF1 JASPAR yes 87886889
chr4 3047310 3047321 USF2 JASPAR yes 87886890
chr4 3047311 3047321 BHLHE40 JASPAR yes 49191791
chr4 3047311 3047321 BHLHE41 JASPAR yes 49191792
chr4 3047311 3047321 HEY1 JASPAR yes 49191793
chr4 3047311 3047321 HEY2 JASPAR yes 49191794
chr4 3047311 3047321 MAX JASPAR yes 49191795
chr4 3047311 3047321 MLXIPL JASPAR yes 49191796
chr4 3047311 3047321 MLX JASPAR yes 49191797
chr4 3047311 3047321 MNT JASPAR yes 49191798
chr4 3047311 3047321 SREBF2 JASPAR yes 49191799
chr4 3047311 3047321 TFE3 JASPAR yes 49191800
chr4 3047311 3047321 TFEB JASPAR yes 49191801
chr4 3047311 3047321 TFEC JASPAR yes 49191802
chr4 3047311 3047321 BHLHE40 JASPAR yes 87886891
chr4 3047311 3047321 BHLHE41 JASPAR yes 87886892
chr4 3047311 3047321 HEY1 JASPAR yes 87886893
chr4 3047311 3047321 HEY2 JASPAR yes 87886894
chr4 3047311 3047321 MAX JASPAR yes 87886895
chr4 3047311 3047321 MLXIPL JASPAR yes 87886896
chr4 3047311 3047321 MLX JASPAR yes 87886897
chr4 3047311 3047321 MNT JASPAR yes 87886898
chr4 3047311 3047321 SREBF2 JASPAR yes 87886899
chr4 3047311 3047321 TFE3 JASPAR yes 87886900
chr4 3047311 3047321 TFEB JASPAR yes 87886901
chr4 3047311 3047321 TFEC JASPAR yes 87886902
chr4 3047311 3047322 USF1 JASPAR yes 49191803
chr4 3047311 3047322 USF1 JASPAR yes 87886903
chr4 3047312 3047322 MAX JASPAR yes 49191804
chr4 3047312 3047322 MAX JASPAR yes 87886904
chr4 3047313 3047318 MYC TRANSFAC yes 49191805
chr4 3047313 3047318 USF1 TRANSFAC yes 49191806
chr4 3047313 3047318 USF2 TRANSFAC yes 49191807
chr4 3047313 3047318 MYC TRANSFAC yes 87886905
chr4 3047313 3047318 USF1 TRANSFAC yes 87886906
chr4 3047313 3047318 USF2 TRANSFAC yes 87886907
chr4 3047323 3047338 SOX21 JASPAR yes 49191808
chr4 3047323 3047338 SOX21 JASPAR yes 87886908
chr4 3047332 3047349 ESR1 JASPAR yes 49191809
chr4 3047332 3047349 ESR1 JASPAR yes 87886909
chr4 3047347 3047362 RUNX2 JASPAR yes 49191810
chr4 3047347 3047362 RUNX2 JASPAR yes 87886910
chr4 3047348 3047355 PEA3 TRANSFAC yes 49191811
chr4 3047348 3047355 PEA3 TRANSFAC yes 87886911
chr4 3047354 3047364 RELA JASPAR yes 49191812
chr4 3047354 3047364 RELA JASPAR yes 87886912
chr4 3047367 3047381 BATF3 JASPAR yes 49191813
chr4 3047367 3047381 BATF3 JASPAR yes 87886913
chr4 3047370 3047375 ATF1 TRANSFAC yes 49191814
chr4 3047370 3047375 ATF1 TRANSFAC yes 87886914
chr4 3047370 3047378 CREB1 JASPAR yes 49191815
chr4 3047370 3047378 CREB1 JASPAR yes 87886915
chr4 3047371 3047389 RARA JASPAR yes 49191816
chr4 3047371 3047389 RARA JASPAR yes 87886916
chr4 3047372 3047377 ATF1 TRANSFAC yes 49191817
chr4 3047372 3047377 ATF1 TRANSFAC yes 87886917
chr4 3047376 3047390 SPI1 JASPAR yes 49191818
chr4 3047376 3047390 SPI1 JASPAR yes 87886918
chr4 3047380 3047397 RARA JASPAR yes 49191819
chr4 3047380 3047397 RXRA JASPAR yes 49191820
chr4 3047380 3047397 RARA JASPAR yes 87886919
chr4 3047380 3047397 RXRA JASPAR yes 87886920
chr4 3047417 3047428 EBF1 JASPAR yes 49191821
chr4 3047417 3047428 EBF1 JASPAR yes 87886921
chr4 3047428 3047443 RFX5 JASPAR yes 49191822
chr4 3047428 3047443 RFX5 JASPAR yes 87886922
chr4 3047443 3047458 RUNX2 JASPAR yes 49191823
chr4 3047443 3047458 RUNX2 JASPAR yes 87886923
chr4 3047446 3047458 GLI2 JASPAR yes 49191824
chr4 3047446 3047458 GLI2 JASPAR yes 87886924
chr4 3047447 3047457 RUNX3 JASPAR yes 49191825
chr4 3047447 3047457 RUNX3 JASPAR yes 87886925
chr4 3047454 3047460 MYC TRANSFAC yes 49191826
chr4 3047454 3047460 MYC TRANSFAC yes 87886926
chr4 3047459 3047471 EHF JASPAR yes 49191827
chr4 3047459 3047471 ELF4 JASPAR yes 49191828
chr4 3047459 3047471 EHF JASPAR yes 87886927
chr4 3047459 3047471 ELF4 JASPAR yes 87886928
chr4 3047459 3047472 ELF3 JASPAR yes 49191829
chr4 3047459 3047472 ELF3 JASPAR yes 87886929
chr4 3047460 3047471 ELF5 JASPAR yes 49191830
chr4 3047460 3047471 ELF5 JASPAR yes 87886930
chr4 3047461 3047468 ETS1 TRANSFAC yes 49191831
chr4 3047461 3047468 ETS1 TRANSFAC yes 87886931
chr4 3047462 3047470 EHF JASPAR yes 49191832
chr4 3047462 3047470 EHF JASPAR yes 87886932
chr4 3047468 3047473 ETS2 TRANSFAC yes 49191833
chr4 3047468 3047473 ETS2 TRANSFAC yes 87886933
chr4 3047490 3047508 NFYA JASPAR yes 49191834
chr4 3047490 3047508 NFYA JASPAR yes 87886934
chr4 3047493 3047509 NFYA JASPAR yes 49191835
chr4 3047493 3047509 NFYA JASPAR yes 87886935
chr4 3047496 3047511 NFYB JASPAR yes 49191836
chr4 3047496 3047511 NFYB JASPAR yes 87886936
chr4 3047498 3047503 NFY TRANSFAC yes 49191837
chr4 3047498 3047503 NFY TRANSFAC yes 87886937
chr4 3047547 3047568 IRF1 JASPAR yes 49191838
chr4 3047547 3047568 IRF1 JASPAR yes 87886938
chr4 3047549 3047564 STAT2 JASPAR yes 49191839
chr4 3047549 3047564 STAT2 JASPAR yes 87886939
chr4 3047551 3047565 IRF8 JASPAR yes 49191840
chr4 3047551 3047565 IRF8 JASPAR yes 87886940
chr4 3047551 3047566 IRF9 JASPAR yes 49191841
chr4 3047551 3047566 IRF9 JASPAR yes 87886941
chr4 3047553 3047568 FOXA1 JASPAR yes 49191842
chr4 3047553 3047568 FOXA1 JASPAR yes 87886942
chr4 3047554 3047569 FOXP1 JASPAR yes 49191843
chr4 3047554 3047569 FOXP1 JASPAR yes 87886943
chr4 3047555 3047566 FOXP2 JASPAR yes 49191844
chr4 3047555 3047566 FOXP2 JASPAR yes 87886944
chr4 3047555 3047567 FOXC2 JASPAR yes 49191845
chr4 3047555 3047567 FOXC2 JASPAR yes 87886945
chr4 3047557 3047568 FOXA1 JASPAR yes 49191846
chr4 3047557 3047568 FOXH1 JASPAR yes 49191847
chr4 3047557 3047568 FOXA1 JASPAR yes 87886946
chr4 3047557 3047568 FOXH1 JASPAR yes 87886947
chr4 3047568 3047576 EHF JASPAR yes 49191848
chr4 3047568 3047576 EHF JASPAR yes 87886948
chr4 3047574 3047584 TEAD4 JASPAR yes 49191849
chr4 3047574 3047584 TEAD4 JASPAR yes 87886949
chr4 3047574 3047586 TEAD1 JASPAR yes 49191850
chr4 3047574 3047586 TEAD1 JASPAR yes 87886950
chr4 3047575 3047583 TEAD3 JASPAR yes 49191851
chr4 3047575 3047583 TEAD3 JASPAR yes 87886951
SNP sites on vista43942[chr4:3047149-3047582]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3047537 rs2798289 T C
RUNX3
7355780
Genes possibly regulated by vista43942[chr4:3047149-3047582]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2939660 2965112 - NOP14 ENSG00000087269.11 2965112 0.65 1.0 4479 17963
chr4 2965335 3042474 + GRK4 ENSG00000125388.15 2965335 0.72 0.99 4480 18186
chr4 3076408 3245676 + HTT ENSG00000197386.6 3076408 0.74 1.0 4481 71174
Expression level of Genes
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miRNAs possibly regulated by vista43942[chr4:3047149-3047582]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results