EnhancerDB
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  3. vista43943[chr4:3061780-3062086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43943[chr4:3061780-3062086]
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Tissue distribution of vista43943
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Transcription factor that possibly regulate vista43943[chr4:3061780-3062086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3061804 3061808 YY1 TRANSFAC yes 49191852
chr4 3061830 3061845 TP53 JASPAR yes 49191853
chr4 3061845 3061855 TBX21 JASPAR yes 49191854
chr4 3061845 3061856 TBX20 JASPAR yes 49191855
chr4 3061845 3061858 EOMES JASPAR yes 49191856
chr4 3061846 3061854 MGA JASPAR yes 49191857
chr4 3061846 3061854 TBX15 JASPAR yes 49191858
chr4 3061846 3061854 TBX1 JASPAR yes 49191859
chr4 3061846 3061854 TBX4 JASPAR yes 49191860
chr4 3061846 3061854 TBX5 JASPAR yes 49191861
chr4 3061847 3061860 JUN JASPAR yes 49191862
chr4 3061848 3061861 ATF4 JASPAR yes 49191863
chr4 3061849 3061860 CEBPA JASPAR yes 49191864
chr4 3061850 3061861 CEBPB JASPAR yes 49191865
chr4 3061860 3061869 HIC2 JASPAR yes 49191866
chr4 3061861 3061870 NFIX JASPAR yes 49191867
chr4 3061862 3061868 NFIC JASPAR yes 49191868
chr4 3061889 3061898 NFIX JASPAR yes 49191869
chr4 3061889 3061899 NFIA JASPAR yes 49191870
chr4 3061891 3061897 NFIC JASPAR yes 49191871
chr4 3061891 3061902 NFE2L2 JASPAR yes 49191872
chr4 3061908 3061926 IRF2 JASPAR yes 49191873
chr4 3061917 3061927 RORA JASPAR yes 49191874
chr4 3061921 3061938 RXRA JASPAR yes 49191875
chr4 3061922 3061926 ESR1 TRANSFAC yes 49191876
chr4 3061936 3061948 PROX1 JASPAR yes 49191877
chr4 3061947 3061951 YY1 TRANSFAC yes 49191878
chr4 3061955 3061959 YY1 TRANSFAC yes 49191879
chr4 3061956 3061964 FEV JASPAR yes 49191880
chr4 3061958 3061963 ETS2 TRANSFAC yes 49191881
chr4 3061993 3062006 EOMES JASPAR yes 49191882
chr4 3061995 3062006 TBX20 JASPAR yes 49191883
chr4 3061996 3062006 TBX21 JASPAR yes 49191884
chr4 3061997 3062005 MGA JASPAR yes 49191885
chr4 3061997 3062005 TBX15 JASPAR yes 49191886
chr4 3061997 3062005 TBX1 JASPAR yes 49191887
chr4 3061997 3062005 TBX4 JASPAR yes 49191888
chr4 3061997 3062005 TBX5 JASPAR yes 49191889
chr4 3062009 3062020 NFKB1 JASPAR yes 49191890
chr4 3062010 3062020 REL JASPAR yes 49191891
chr4 3062019 3062030 FOSL2 JASPAR yes 49191892
chr4 3062020 3062026 JUN TRANSFAC yes 49191893
chr4 3062037 3062048 FOXB1 JASPAR yes 49191894
chr4 3062038 3062042 YY1 TRANSFAC yes 49191895
chr4 3062045 3062065 TP53 JASPAR yes 49191896
chr4 3062046 3062050 YY1 TRANSFAC yes 49191897
chr4 3062076 3062080 YY1 TRANSFAC yes 49191898
chr4 3062078 3062084 TCF4 TRANSFAC yes 49191899
SNP sites on vista43943[chr4:3061780-3062086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3061871 rs140156066 G A no 7355849
chr4 3062012 rs61791251 G A
NFKB1 REL
7355850
chr4 3062059 rs150321436 T C
TP53
7355851
chr4 3062065 rs76671990 G C
TP53
7355852
Genes possibly regulated by vista43943[chr4:3061780-3062086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2939660 2965112 - NOP14 ENSG00000087269.11 2965112 0.65 1.0 4479 3332
chr4 2965335 3042474 + GRK4 ENSG00000125388.15 2965335 0.72 0.99 4480 3555
chr4 3076408 3245676 + HTT ENSG00000197386.6 3076408 0.74 1.0 4481 85678
Expression level of Genes
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miRNAs possibly regulated by vista43943[chr4:3061780-3062086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results