EnhancerDB
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  3. vista43946[chr4:3194617-3194824]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43946[chr4:3194617-3194824]
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Tissue distribution of vista43946
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Transcription factor that possibly regulate vista43946[chr4:3194617-3194824]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3194615 3194630 HNF4A JASPAR yes 49191964
chr4 3194615 3194630 HNF4A JASPAR yes 87891799
chr4 3194616 3194625 NFIX JASPAR yes 49191965
chr4 3194616 3194625 NFIX JASPAR yes 87891800
chr4 3194616 3194626 NFIA JASPAR yes 49191966
chr4 3194616 3194626 NFIA JASPAR yes 87891801
chr4 3194618 3194624 NFIC JASPAR yes 49191967
chr4 3194618 3194624 NFIC JASPAR yes 87891802
chr4 3194627 3194632 MYC TRANSFAC yes 49191968
chr4 3194627 3194632 MYC TRANSFAC yes 87891803
chr4 3194671 3194677 ATF1 TRANSFAC yes 49191969
chr4 3194671 3194677 ATF1 TRANSFAC yes 87891804
chr4 3194694 3194698 YY1 TRANSFAC yes 49191970
chr4 3194694 3194698 YY1 TRANSFAC yes 87891805
chr4 3194695 3194703 FEV JASPAR yes 49191971
chr4 3194695 3194703 FEV JASPAR yes 87891806
chr4 3194738 3194743 SP1 TRANSFAC yes 49191972
chr4 3194738 3194743 SP1 TRANSFAC yes 87891807
chr4 3194741 3194745 LFA1 TRANSFAC yes 49191973
chr4 3194741 3194745 LFA1 TRANSFAC yes 87891808
chr4 3194741 3194761 TP63 JASPAR yes 49191974
chr4 3194741 3194761 TP63 JASPAR yes 87891809
chr4 3194757 3194762 H4TF1 TRANSFAC yes 49191975
chr4 3194757 3194762 H4TF1 TRANSFAC yes 87891810
chr4 3194797 3194807 ELK1 JASPAR yes 49191976
chr4 3194797 3194807 ELK1 JASPAR yes 87891811
chr4 3194801 3194822 REST JASPAR yes 49191977
chr4 3194801 3194822 REST JASPAR yes 87891812
chr4 3194802 3194821 REST JASPAR yes 49191978
chr4 3194802 3194821 REST JASPAR yes 87891813
chr4 3194815 3194827 NHLH1 JASPAR yes 49191979
chr4 3194815 3194827 NHLH1 JASPAR yes 87891814
chr4 3194816 3194826 NHLH1 JASPAR yes 49191980
chr4 3194816 3194826 NHLH1 JASPAR yes 87891815
SNP sites on vista43946[chr4:3194617-3194824]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3194637 rs141645556 A T no 7356295
chr4 3194670 rs571004492 A G no 7356296
Genes possibly regulated by vista43946[chr4:3194617-3194824]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3246096 3273465 + MSANTD1 ENSG00000188981.6 3246096 0.76 1.0 4482 48728
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 69
Expression level of Genes
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miRNAs possibly regulated by vista43946[chr4:3194617-3194824]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results