EnhancerDB
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  3. vista43947[chr4:3203733-3204143]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43947[chr4:3203733-3204143]
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Tissue distribution of vista43947
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Transcription factor that possibly regulate vista43947[chr4:3203733-3204143]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3203718 3203733 TFAP2C JASPAR yes 49191981
chr4 3203718 3203733 TFAP2C JASPAR yes 87893148
chr4 3203755 3203759 H4TF2 TRANSFAC yes 49191982
chr4 3203755 3203759 H4TF2 TRANSFAC yes 87893149
chr4 3203758 3203770 SRF JASPAR yes 49191983
chr4 3203758 3203770 SRF JASPAR yes 87893150
chr4 3203767 3203771 H4TF2 TRANSFAC yes 49191984
chr4 3203767 3203771 H4TF2 TRANSFAC yes 87893151
chr4 3203789 3203795 MYC TRANSFAC yes 49191985
chr4 3203789 3203795 MYC TRANSFAC yes 87893152
chr4 3203795 3203810 HNF4A JASPAR yes 49191986
chr4 3203795 3203810 HNF4A JASPAR yes 87893153
chr4 3203796 3203811 HNF4G JASPAR yes 49191987
chr4 3203796 3203811 HNF4G JASPAR yes 87893154
chr4 3203802 3203806 NFE TRANSFAC yes 49191988
chr4 3203802 3203806 NFE TRANSFAC yes 87893155
chr4 3203803 3203818 RUNX2 JASPAR yes 49191989
chr4 3203803 3203818 RUNX2 JASPAR yes 87893156
chr4 3203813 3203824 HOXD12 JASPAR yes 49191990
chr4 3203813 3203824 HOXD12 JASPAR yes 87893157
chr4 3203814 3203825 CDX2 JASPAR yes 49191991
chr4 3203814 3203825 CDX2 JASPAR yes 87893158
chr4 3203817 3203828 FOS JASPAR yes 49191992
chr4 3203817 3203828 FOSL1 JASPAR yes 49191993
chr4 3203817 3203828 JUND JASPAR yes 49191994
chr4 3203817 3203828 FOS JASPAR yes 87893159
chr4 3203817 3203828 FOSL1 JASPAR yes 87893160
chr4 3203817 3203828 JUND JASPAR yes 87893161
chr4 3203818 3203832 JUN JASPAR yes 49191995
chr4 3203818 3203832 JUN JASPAR yes 87893162
chr4 3203834 3203838 NFE TRANSFAC yes 49191996
chr4 3203834 3203838 NFE TRANSFAC yes 87893163
chr4 3203839 3203856 RARA JASPAR yes 49191997
chr4 3203839 3203856 RXRA JASPAR yes 49191998
chr4 3203839 3203856 RARA JASPAR yes 87893164
chr4 3203839 3203856 RXRA JASPAR yes 87893165
chr4 3203875 3203882 E2F1 TRANSFAC yes 49191999
chr4 3203875 3203882 E2F1 TRANSFAC yes 87893166
chr4 3203875 3203883 E2F1 JASPAR yes 49192000
chr4 3203875 3203883 E2F1 JASPAR yes 87893167
chr4 3203880 3203900 RREB1 JASPAR yes 49192001
chr4 3203880 3203900 RREB1 JASPAR yes 87893168
chr4 3203882 3203902 RREB1 JASPAR yes 49192002
chr4 3203882 3203902 RREB1 JASPAR yes 87893169
chr4 3203915 3203919 ESR1 TRANSFAC yes 49192003
chr4 3203915 3203919 ESR1 TRANSFAC yes 87893170
chr4 3203924 3203942 ESR2 JASPAR yes 49192004
chr4 3203924 3203942 ESR2 JASPAR yes 87893171
chr4 3203927 3203942 AR JASPAR yes 49192005
chr4 3203927 3203942 AR JASPAR yes 87893172
chr4 3203936 3203947 BATF JASPAR yes 49192006
chr4 3203936 3203947 BATF JASPAR yes 87893173
chr4 3203938 3203949 FOS JASPAR yes 49192007
chr4 3203938 3203949 FOSL1 JASPAR yes 49192008
chr4 3203938 3203949 JUND JASPAR yes 49192009
chr4 3203938 3203949 FOS JASPAR yes 87893174
chr4 3203938 3203949 FOSL1 JASPAR yes 87893175
chr4 3203938 3203949 JUND JASPAR yes 87893176
chr4 3203939 3203950 FOSL2 JASPAR yes 49192010
chr4 3203939 3203950 JUNB JASPAR yes 49192011
chr4 3203939 3203950 FOSL2 JASPAR yes 87893177
chr4 3203939 3203950 JUNB JASPAR yes 87893178
chr4 3203939 3203953 JUN JASPAR yes 49192012
chr4 3203939 3203953 JUN JASPAR yes 87893179
chr4 3203982 3203987 SP1 TRANSFAC yes 49192013
chr4 3203982 3203987 SP1 TRANSFAC yes 87893180
chr4 3203991 3204001 SREBF1 JASPAR yes 49192014
chr4 3203991 3204001 SREBF1 JASPAR yes 87893181
chr4 3204002 3204012 ZNF740 JASPAR yes 49192015
chr4 3204002 3204012 ZNF740 JASPAR yes 87893182
chr4 3204003 3204013 ZNF740 JASPAR yes 49192016
chr4 3204003 3204013 ZNF740 JASPAR yes 87893183
chr4 3204045 3204052 MEIS1 JASPAR yes 49192017
chr4 3204045 3204052 MEIS1 JASPAR yes 87893184
chr4 3204063 3204071 FOXL1 JASPAR yes 49192018
chr4 3204063 3204071 FOXL1 JASPAR yes 87893185
chr4 3204078 3204082 YY1 TRANSFAC yes 49192019
chr4 3204078 3204082 YY1 TRANSFAC yes 87893186
chr4 3204093 3204107 SPI1 JASPAR yes 49192020
chr4 3204093 3204107 SPIC JASPAR yes 49192021
chr4 3204093 3204107 SPI1 JASPAR yes 87893187
chr4 3204093 3204107 SPIC JASPAR yes 87893188
chr4 3204114 3204124 POU6F2 JASPAR yes 49192022
chr4 3204114 3204124 POU6F2 JASPAR yes 87893189
chr4 3204115 3204125 EVX1 JASPAR yes 49192023
chr4 3204115 3204125 EVX2 JASPAR yes 49192024
chr4 3204115 3204125 HOXA2 JASPAR yes 49192025
chr4 3204115 3204125 MEOX1 JASPAR yes 49192026
chr4 3204115 3204125 EVX1 JASPAR yes 87893190
chr4 3204115 3204125 EVX2 JASPAR yes 87893191
chr4 3204115 3204125 HOXA2 JASPAR yes 87893192
chr4 3204115 3204125 MEOX1 JASPAR yes 87893193
chr4 3204118 3204122 YY1 TRANSFAC yes 49192027
chr4 3204118 3204122 YY1 TRANSFAC yes 87893194
chr4 3204136 3204151 HNF4G JASPAR yes 49192028
chr4 3204136 3204151 HNF4G JASPAR yes 87893195
chr4 3204137 3204152 HNF4A JASPAR yes 49192029
chr4 3204137 3204152 HNF4A JASPAR yes 87893196
chr4 3204140 3204146 TCF4 TRANSFAC yes 49192030
chr4 3204140 3204146 TCF4 TRANSFAC yes 87893197
SNP sites on vista43947[chr4:3203733-3204143]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3203843 rs533893355 C T
RARA RXRA
7356396
chr4 3203872 rs138800905 A G no 7356397
Genes possibly regulated by vista43947[chr4:3203733-3204143]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3246096 3273465 + MSANTD1 ENSG00000188981.6 3246096 0.76 1.0 4482 58047
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 9388
Expression level of Genes
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miRNAs possibly regulated by vista43947[chr4:3203733-3204143]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results