EnhancerDB
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  3. vista43951[chr4:3323359-3323797]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43951[chr4:3323359-3323797]
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Tissue distribution of vista43951
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Transcription factor that possibly regulate vista43951[chr4:3323359-3323797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3323374 3323386 TFAP2A JASPAR yes 49192205
chr4 3323374 3323386 TFAP2B JASPAR yes 49192206
chr4 3323374 3323386 TFAP2C JASPAR yes 49192207
chr4 3323374 3323386 TFAP2A JASPAR yes 87896959
chr4 3323374 3323386 TFAP2B JASPAR yes 87896960
chr4 3323374 3323386 TFAP2C JASPAR yes 87896961
chr4 3323376 3323385 TFAP2A JASPAR yes 49192208
chr4 3323376 3323385 TFAP2A JASPAR yes 87896962
chr4 3323380 3323390 SP1 JASPAR yes 49192209
chr4 3323380 3323390 SP1 JASPAR yes 87896963
chr4 3323381 3323385 LFA1 TRANSFAC yes 49192210
chr4 3323381 3323385 LFA1 TRANSFAC yes 87896964
chr4 3323388 3323403 RUNX2 JASPAR yes 49192211
chr4 3323388 3323403 RUNX2 JASPAR yes 87896965
chr4 3323392 3323407 RFX5 JASPAR yes 49192212
chr4 3323392 3323407 RFX5 JASPAR yes 87896966
chr4 3323421 3323435 XBP1 JASPAR yes 49192213
chr4 3323421 3323435 XBP1 JASPAR yes 87896967
chr4 3323422 3323436 CREB3 JASPAR yes 49192214
chr4 3323422 3323436 CREB3L1 JASPAR yes 49192215
chr4 3323422 3323436 CREB3 JASPAR yes 87896968
chr4 3323422 3323436 CREB3L1 JASPAR yes 87896969
chr4 3323427 3323432 ATF1 TRANSFAC yes 49192216
chr4 3323427 3323432 ATF1 TRANSFAC yes 87896970
chr4 3323434 3323444 SP1 JASPAR yes 49192217
chr4 3323434 3323444 SP1 JASPAR yes 87896971
chr4 3323434 3323453 CTCF JASPAR yes 49192218
chr4 3323434 3323453 CTCF JASPAR yes 87896972
chr4 3323456 3323466 TFEB JASPAR yes 49192219
chr4 3323456 3323466 TFEB JASPAR yes 87896973
chr4 3323492 3323503 NRF1 JASPAR yes 49192220
chr4 3323492 3323503 NRF1 JASPAR yes 87896974
chr4 3323493 3323497 LFA1 TRANSFAC yes 49192221
chr4 3323493 3323497 LFA1 TRANSFAC yes 87896975
chr4 3323498 3323503 SP1 TRANSFAC yes 49192222
chr4 3323498 3323503 SP1 TRANSFAC yes 87896976
chr4 3323513 3323524 ESRRA JASPAR yes 49192223
chr4 3323513 3323524 ESRRA JASPAR yes 87896977
chr4 3323549 3323565 SOX8 JASPAR yes 49192224
chr4 3323549 3323565 SOX8 JASPAR yes 87896978
chr4 3323593 3323608 MYBL2 JASPAR yes 49192225
chr4 3323593 3323608 MYBL2 JASPAR yes 87896979
chr4 3323597 3323607 BARHL2 JASPAR yes 49192226
chr4 3323597 3323607 BARHL2 JASPAR yes 87896980
chr4 3323605 3323620 LEF1 JASPAR yes 49192227
chr4 3323605 3323620 LEF1 JASPAR yes 87896981
chr4 3323606 3323620 TCF7L2 JASPAR yes 49192228
chr4 3323606 3323620 TCF7L2 JASPAR yes 87896982
chr4 3323615 3323623 HOXA5 JASPAR yes 49192229
chr4 3323615 3323623 HOXA5 JASPAR yes 87896983
chr4 3323642 3323654 POU2F1 JASPAR yes 49192230
chr4 3323642 3323654 POU2F1 JASPAR yes 87896984
chr4 3323642 3323655 POU3F3 JASPAR yes 49192231
chr4 3323642 3323655 POU3F3 JASPAR yes 87896985
chr4 3323642 3323656 POU1F1 JASPAR yes 49192232
chr4 3323642 3323656 POU1F1 JASPAR yes 87896986
chr4 3323643 3323655 POU3F1 JASPAR yes 49192233
chr4 3323643 3323655 POU3F2 JASPAR yes 49192234
chr4 3323643 3323655 POU3F1 JASPAR yes 87896987
chr4 3323643 3323655 POU3F2 JASPAR yes 87896988
chr4 3323643 3323656 POU2F2 JASPAR yes 49192235
chr4 3323643 3323656 POU2F2 JASPAR yes 87896989
chr4 3323644 3323653 POU3F4 JASPAR yes 49192236
chr4 3323644 3323653 POU5F1B JASPAR yes 49192237
chr4 3323644 3323653 POU3F4 JASPAR yes 87896990
chr4 3323644 3323653 POU5F1B JASPAR yes 87896991
chr4 3323649 3323667 MAFF JASPAR yes 49192238
chr4 3323649 3323667 MAFF JASPAR yes 87896992
chr4 3323651 3323662 NRL JASPAR yes 49192239
chr4 3323651 3323662 NRL JASPAR yes 87896993
chr4 3323651 3323666 MAFK JASPAR yes 49192240
chr4 3323651 3323666 MAFK JASPAR yes 87896994
chr4 3323674 3323678 TEAD2 TRANSFAC yes 49192241
chr4 3323674 3323678 TEAD2 TRANSFAC yes 87896995
chr4 3323707 3323725 RARA JASPAR yes 49192242
chr4 3323707 3323725 RARA JASPAR yes 87896996
chr4 3323711 3323715 H1TF2 TRANSFAC yes 49192243
chr4 3323711 3323715 NFE TRANSFAC yes 49192244
chr4 3323711 3323715 SRF TRANSFAC yes 49192245
chr4 3323711 3323715 H1TF2 TRANSFAC yes 87896997
chr4 3323711 3323715 NFE TRANSFAC yes 87896998
chr4 3323711 3323715 SRF TRANSFAC yes 87896999
chr4 3323711 3323717 NFYC TRANSFAC yes 49192246
chr4 3323711 3323717 NFYC TRANSFAC yes 87897000
chr4 3323728 3323731 MYB TRANSFAC yes 49192247
chr4 3323728 3323731 MYB TRANSFAC yes 87897001
chr4 3323746 3323755 SOX9 JASPAR yes 49192248
chr4 3323746 3323755 SOX9 JASPAR yes 87897002
chr4 3323760 3323766 NFIC JASPAR yes 49192249
chr4 3323760 3323766 NFIC JASPAR yes 87897003
chr4 3323782 3323794 YY1 JASPAR yes 49192250
chr4 3323782 3323794 YY1 JASPAR yes 87897004
chr4 3323794 3323798 NFE TRANSFAC yes 49192251
chr4 3323794 3323798 NFE TRANSFAC yes 87897005
SNP sites on vista43951[chr4:3323359-3323797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3323430 rs192046297 G A
ATF1 CREB3 CREB3L1 XBP1
7356773
chr4 3323514 rs531600418 G A
ESRRA
7356774
chr4 3323741 rs77868188 G C no 7356775
chr4 3323767 rs2857861 C T no 7356776
Genes possibly regulated by vista43951[chr4:3323359-3323797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3246096 3273465 + MSANTD1 ENSG00000188981.6 3246096 0.76 1.0 4482 22737
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 71396
Expression level of Genes
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miRNAs possibly regulated by vista43951[chr4:3323359-3323797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results