EnhancerDB
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  3. vista43955[chr4:3389642-3390154]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43955[chr4:3389642-3390154]
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Tissue distribution of vista43955
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Transcription factor that possibly regulate vista43955[chr4:3389642-3390154]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3389649 3389661 YY1 JASPAR yes 49192409
chr4 3389649 3389661 YY1 JASPAR yes 87902281
chr4 3389654 3389658 YY1 TRANSFAC yes 49192410
chr4 3389654 3389658 YY1 TRANSFAC yes 87902282
chr4 3389657 3389670 ZBTB18 JASPAR yes 49192411
chr4 3389657 3389670 ZBTB18 JASPAR yes 87902283
chr4 3389661 3389666 MYC TRANSFAC yes 49192412
chr4 3389661 3389666 MYC TRANSFAC yes 87902284
chr4 3389682 3389693 EBF1 JASPAR yes 49192413
chr4 3389682 3389693 EBF1 JASPAR yes 87902285
chr4 3389689 3389700 E2F6 JASPAR yes 49192414
chr4 3389689 3389700 E2F6 JASPAR yes 87902286
chr4 3389690 3389695 SP1 TRANSFAC yes 49192415
chr4 3389690 3389695 SP1 TRANSFAC yes 87902287
chr4 3389693 3389698 ETS2 TRANSFAC yes 49192416
chr4 3389693 3389698 ETS2 TRANSFAC yes 87902288
chr4 3389721 3389736 AR JASPAR yes 49192417
chr4 3389721 3389736 AR JASPAR yes 87902289
chr4 3389737 3389747 ETV6 JASPAR yes 49192418
chr4 3389737 3389747 ETV6 JASPAR yes 87902290
chr4 3389738 3389746 EHF JASPAR yes 49192419
chr4 3389738 3389746 EHF JASPAR yes 87902291
chr4 3389739 3389746 SPI1 JASPAR yes 49192420
chr4 3389739 3389746 SPI1 JASPAR yes 87902292
chr4 3389751 3389765 TLX1 JASPAR yes 49192421
chr4 3389751 3389765 TLX1 JASPAR yes 87902293
chr4 3389752 3389766 TLX1 JASPAR yes 49192422
chr4 3389752 3389766 TLX1 JASPAR yes 87902294
chr4 3389770 3389785 AR JASPAR yes 49192423
chr4 3389770 3389785 AR JASPAR yes 87902295
chr4 3389786 3389796 ETV6 JASPAR yes 49192424
chr4 3389786 3389796 ETV6 JASPAR yes 87902296
chr4 3389787 3389795 EHF JASPAR yes 49192425
chr4 3389787 3389795 EHF JASPAR yes 87902297
chr4 3389788 3389795 SPI1 JASPAR yes 49192426
chr4 3389788 3389795 SPI1 JASPAR yes 87902298
chr4 3389796 3389801 GATA2 JASPAR yes 49192427
chr4 3389796 3389801 GATA2 JASPAR yes 87902299
chr4 3389813 3389828 ZIC3 JASPAR yes 49192428
chr4 3389813 3389828 ZIC3 JASPAR yes 87902300
chr4 3389818 3389833 RFX5 JASPAR yes 49192429
chr4 3389818 3389833 RFX5 JASPAR yes 87902301
chr4 3389827 3389838 NFKB1 JASPAR yes 49192430
chr4 3389827 3389838 NFKB1 JASPAR yes 87902302
chr4 3389831 3389852 ZNF263 JASPAR yes 49192431
chr4 3389831 3389852 ZNF263 JASPAR yes 87902303
chr4 3389834 3389855 ZNF263 JASPAR yes 49192432
chr4 3389834 3389855 ZNF263 JASPAR yes 87902304
chr4 3389837 3389858 ZNF263 JASPAR yes 49192433
chr4 3389837 3389858 ZNF263 JASPAR yes 87902305
chr4 3389838 3389859 ZNF263 JASPAR yes 49192434
chr4 3389838 3389859 ZNF263 JASPAR yes 87902306
chr4 3389867 3389882 TFAP2A JASPAR yes 49192435
chr4 3389867 3389882 TFAP2A JASPAR yes 87902307
chr4 3389869 3389884 TFAP2A JASPAR yes 49192436
chr4 3389869 3389884 TFAP2C JASPAR yes 49192437
chr4 3389869 3389884 TFAP2A JASPAR yes 87902308
chr4 3389869 3389884 TFAP2C JASPAR yes 87902309
chr4 3389871 3389880 TFAP2A JASPAR yes 49192438
chr4 3389871 3389880 TFAP2A JASPAR yes 87902310
chr4 3389874 3389888 PLAG1 JASPAR yes 49192439
chr4 3389874 3389888 PLAG1 JASPAR yes 87902311
chr4 3389875 3389880 SP1 TRANSFAC yes 49192440
chr4 3389875 3389880 SP1 TRANSFAC yes 87902312
chr4 3389882 3389900 NR3C1 JASPAR yes 49192441
chr4 3389882 3389900 NR3C1 JASPAR yes 87902313
chr4 3389904 3389915 NFKB1 JASPAR yes 49192442
chr4 3389904 3389915 NFKB1 JASPAR yes 87902314
chr4 3389905 3389915 NFKB1 JASPAR yes 49192443
chr4 3389905 3389915 NFKB1 JASPAR yes 87902315
chr4 3389921 3389942 ZNF263 JASPAR yes 49192444
chr4 3389921 3389942 ZNF263 JASPAR yes 87902316
chr4 3389924 3389945 ZNF263 JASPAR yes 49192445
chr4 3389924 3389945 ZNF263 JASPAR yes 87902317
chr4 3389926 3389947 ZNF263 JASPAR yes 49192446
chr4 3389926 3389947 ZNF263 JASPAR yes 87902318
chr4 3389927 3389948 ZNF263 JASPAR yes 49192447
chr4 3389927 3389948 ZNF263 JASPAR yes 87902319
chr4 3389933 3389939 MAZ TRANSFAC yes 49192448
chr4 3389933 3389939 MAZ TRANSFAC yes 87902320
chr4 3389933 3389944 E2F6 JASPAR yes 49192449
chr4 3389933 3389944 E2F6 JASPAR yes 87902321
chr4 3389935 3389956 ZNF263 JASPAR yes 49192450
chr4 3389935 3389956 ZNF263 JASPAR yes 87902322
chr4 3389938 3389948 SP1 JASPAR yes 49192451
chr4 3389938 3389948 SP1 JASPAR yes 87902323
chr4 3389938 3389959 ZNF263 JASPAR yes 49192452
chr4 3389938 3389959 ZNF263 JASPAR yes 87902324
chr4 3389941 3389962 ZNF263 JASPAR yes 49192453
chr4 3389941 3389962 ZNF263 JASPAR yes 87902325
chr4 3389943 3389964 ZNF263 JASPAR yes 49192454
chr4 3389943 3389964 ZNF263 JASPAR yes 87902326
chr4 3389944 3389965 ZNF263 JASPAR yes 49192455
chr4 3389944 3389965 ZNF263 JASPAR yes 87902327
chr4 3389950 3389956 MAZ TRANSFAC yes 49192456
chr4 3389950 3389956 MAZ TRANSFAC yes 87902328
chr4 3389950 3389961 E2F6 JASPAR yes 49192457
chr4 3389950 3389961 E2F6 JASPAR yes 87902329
chr4 3389952 3389973 ZNF263 JASPAR yes 49192458
chr4 3389952 3389973 ZNF263 JASPAR yes 87902330
chr4 3389955 3389965 SP1 JASPAR yes 49192459
chr4 3389955 3389965 SP1 JASPAR yes 87902331
chr4 3389955 3389976 ZNF263 JASPAR yes 49192460
chr4 3389955 3389976 ZNF263 JASPAR yes 87902332
chr4 3389958 3389979 ZNF263 JASPAR yes 49192461
chr4 3389958 3389979 ZNF263 JASPAR yes 87902333
chr4 3389960 3389981 ZNF263 JASPAR yes 49192462
chr4 3389960 3389981 ZNF263 JASPAR yes 87902334
chr4 3389961 3389982 ZNF263 JASPAR yes 49192463
chr4 3389961 3389982 ZNF263 JASPAR yes 87902335
chr4 3389967 3389973 MAZ TRANSFAC yes 49192464
chr4 3389967 3389973 MAZ TRANSFAC yes 87902336
chr4 3389967 3389978 E2F6 JASPAR yes 49192465
chr4 3389967 3389978 E2F6 JASPAR yes 87902337
chr4 3389969 3389990 ZNF263 JASPAR yes 49192466
chr4 3389969 3389990 ZNF263 JASPAR yes 87902338
chr4 3389972 3389982 SP1 JASPAR yes 49192467
chr4 3389972 3389982 SP1 JASPAR yes 87902339
chr4 3389972 3389993 ZNF263 JASPAR yes 49192468
chr4 3389972 3389993 ZNF263 JASPAR yes 87902340
chr4 3389975 3389996 ZNF263 JASPAR yes 49192469
chr4 3389975 3389996 ZNF263 JASPAR yes 87902341
chr4 3389978 3389999 ZNF263 JASPAR yes 49192470
chr4 3389978 3389999 ZNF263 JASPAR yes 87902342
chr4 3389984 3389990 MAZ TRANSFAC yes 49192471
chr4 3389984 3389990 MAZ TRANSFAC yes 87902343
chr4 3389984 3389995 E2F6 JASPAR yes 49192472
chr4 3389984 3389995 E2F6 JASPAR yes 87902344
chr4 3389991 3390004 SMAD2 JASPAR yes 49192473
chr4 3389991 3390004 SMAD2 JASPAR yes 87902345
chr4 3390027 3390042 ZIC4 JASPAR yes 49192474
chr4 3390027 3390042 ZIC4 JASPAR yes 87902346
chr4 3390028 3390042 ZIC1 JASPAR yes 49192475
chr4 3390028 3390042 ZIC1 JASPAR yes 87902347
chr4 3390034 3390039 SP1 TRANSFAC yes 49192476
chr4 3390034 3390039 SP1 TRANSFAC yes 87902348
chr4 3390035 3390040 SP1 TRANSFAC yes 49192477
chr4 3390035 3390040 SP1 TRANSFAC yes 87902349
chr4 3390042 3390057 FOXA1 JASPAR yes 49192478
chr4 3390042 3390057 FOXA1 JASPAR yes 87902350
chr4 3390043 3390055 FOXI1 JASPAR yes 49192479
chr4 3390043 3390055 FOXI1 JASPAR yes 87902351
chr4 3390044 3390056 FOXC2 JASPAR yes 49192480
chr4 3390044 3390056 FOXC2 JASPAR yes 87902352
chr4 3390045 3390053 FOXG1 JASPAR yes 49192481
chr4 3390045 3390053 FOXG1 JASPAR yes 87902353
chr4 3390045 3390056 FOXB1 JASPAR yes 49192482
chr4 3390045 3390056 FOXC1 JASPAR yes 49192483
chr4 3390045 3390056 FOXB1 JASPAR yes 87902354
chr4 3390045 3390056 FOXC1 JASPAR yes 87902355
chr4 3390046 3390057 FOXA1 JASPAR yes 49192484
chr4 3390046 3390057 FOXH1 JASPAR yes 49192485
chr4 3390046 3390057 FOXA1 JASPAR yes 87902356
chr4 3390046 3390057 FOXH1 JASPAR yes 87902357
chr4 3390047 3390059 FOXI1 JASPAR yes 49192486
chr4 3390047 3390059 FOXI1 JASPAR yes 87902358
chr4 3390050 3390054 YY1 TRANSFAC yes 49192487
chr4 3390050 3390054 YY1 TRANSFAC yes 87902359
chr4 3390051 3390072 IRF1 JASPAR yes 49192488
chr4 3390051 3390072 IRF1 JASPAR yes 87902360
chr4 3390053 3390068 STAT2 JASPAR yes 49192489
chr4 3390053 3390068 STAT2 JASPAR yes 87902361
chr4 3390054 3390068 SPI1 JASPAR yes 49192490
chr4 3390054 3390068 SPI1 JASPAR yes 87902362
chr4 3390057 3390062 ETS2 TRANSFAC yes 49192491
chr4 3390057 3390062 ETS2 TRANSFAC yes 87902363
chr4 3390064 3390079 FOXP1 JASPAR yes 49192492
chr4 3390064 3390079 FOXP1 JASPAR yes 87902364
chr4 3390070 3390076 TCF4 TRANSFAC yes 49192493
chr4 3390070 3390076 TCF4 TRANSFAC yes 87902365
chr4 3390075 3390085 NFAT4 TRANSFAC yes 49192494
chr4 3390075 3390085 NFAT4 TRANSFAC yes 87902366
chr4 3390076 3390080 YY1 TRANSFAC yes 49192495
chr4 3390076 3390080 YY1 TRANSFAC yes 87902367
chr4 3390078 3390088 NFATC3 JASPAR yes 49192496
chr4 3390078 3390088 NFATC3 JASPAR yes 87902368
chr4 3390079 3390086 NFATC2 JASPAR yes 49192497
chr4 3390079 3390086 NFATC2 JASPAR yes 87902369
chr4 3390085 3390099 IRF7 JASPAR yes 49192498
chr4 3390085 3390099 IRF7 JASPAR yes 87902370
chr4 3390096 3390102 TCF4 TRANSFAC yes 49192499
chr4 3390096 3390102 TCF4 TRANSFAC yes 87902371
chr4 3390103 3390107 TEAD2 TRANSFAC yes 49192500
chr4 3390103 3390107 TEAD2 TRANSFAC yes 87902372
chr4 3390105 3390120 FOXP1 JASPAR yes 49192501
chr4 3390105 3390120 FOXP1 JASPAR yes 87902373
SNP sites on vista43955[chr4:3389642-3390154]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3389707 rs58249502 C T no 7357317
chr4 3389755 rs6847900 G C
TLX1
7357318
chr4 3389758 rs371829760 C T
TLX1
7357319
chr4 3389809 rs142171902 G A no 7357320
chr4 3389811 rs6828057 A G,T no 7357321
chr4 3389821 rs146086244 T G
RFX5 ZIC3
7357322
chr4 3389840 rs188672443 C G
ZNF263
7357323
chr4 3389854 rs576551946 T C
ZNF263
7357324
chr4 3389922 rs533233269 AGAGGAGGAGACGGGAGG A
ZNF263
7357325
chr4 3389967 rs138913052 C T
E2F6 MAZ ZNF263
7357326
chr4 3390120 rs78101638 G C
FOXP1
7357327
chr4 3390146 rs2269496 T C no 7357328
Genes possibly regulated by vista43955[chr4:3389642-3390154]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 5113
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 46540
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 25121
Expression level of Genes
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miRNAs possibly regulated by vista43955[chr4:3389642-3390154]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results