EnhancerDB
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  3. vista43956[chr4:3390647-3391111]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43956[chr4:3390647-3391111]
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Tissue distribution of vista43956
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Transcription factor that possibly regulate vista43956[chr4:3390647-3391111]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3390648 3390889 PAX5 UCSC Txn Factor no Conserved 108531895
chr4 3390646 3390666 RREB1 JASPAR yes 49192502
chr4 3390646 3390666 RREB1 JASPAR yes 87902455
chr4 3390661 3390666 TFAP2A TRANSFAC yes 49192503
chr4 3390661 3390666 TFAP2A TRANSFAC yes 87902456
chr4 3390661 3390667 MZF1 JASPAR yes 49192504
chr4 3390661 3390667 MZF1 JASPAR yes 87902457
chr4 3390674 3390686 NHLH1 JASPAR yes 49192505
chr4 3390674 3390686 NHLH1 JASPAR yes 87902458
chr4 3390675 3390685 NHLH1 JASPAR yes 49192506
chr4 3390675 3390685 NHLH1 JASPAR yes 87902459
chr4 3390685 3390689 NFE TRANSFAC yes 49192507
chr4 3390685 3390689 NFE TRANSFAC yes 87902460
chr4 3390691 3390711 ESR1 JASPAR yes 49192508
chr4 3390691 3390711 ESR1 JASPAR yes 87902461
chr4 3390692 3390703 NFE2L2 JASPAR yes 49192509
chr4 3390692 3390703 NFE2L2 JASPAR yes 87902462
chr4 3390697 3390701 ESR1 TRANSFAC yes 49192510
chr4 3390697 3390701 ESR1 TRANSFAC yes 87902463
chr4 3390704 3390708 NFE TRANSFAC yes 49192511
chr4 3390704 3390708 NFE TRANSFAC yes 87902464
chr4 3390744 3390748 YY1 TRANSFAC yes 49192512
chr4 3390744 3390748 YY1 TRANSFAC yes 87902465
chr4 3390750 3390769 PAX5 JASPAR yes 49192513
chr4 3390750 3390769 PAX5 JASPAR yes 87902466
chr4 3390753 3390770 PAX9 JASPAR yes 49192514
chr4 3390753 3390770 PAX9 JASPAR yes 87902467
chr4 3390802 3390819 PAX1 JASPAR yes 49192515
chr4 3390802 3390819 PAX9 JASPAR yes 49192516
chr4 3390802 3390819 PAX1 JASPAR yes 87902468
chr4 3390802 3390819 PAX9 JASPAR yes 87902469
chr4 3390822 3390831 CDX1 JASPAR yes 49192517
chr4 3390822 3390831 CDX1 JASPAR yes 87902470
chr4 3390822 3390833 CDX2 JASPAR yes 49192518
chr4 3390822 3390833 CDX2 JASPAR yes 87902471
chr4 3390844 3390864 RREB1 JASPAR yes 49192519
chr4 3390844 3390864 RREB1 JASPAR yes 87902472
chr4 3390846 3390861 STAT2 JASPAR yes 49192520
chr4 3390846 3390861 STAT2 JASPAR yes 87902473
chr4 3390848 3390860 IRF1 JASPAR yes 49192521
chr4 3390848 3390860 IRF1 JASPAR yes 87902474
chr4 3390848 3390862 IRF7 JASPAR yes 49192522
chr4 3390848 3390862 IRF7 JASPAR yes 87902475
chr4 3390848 3390863 IRF9 JASPAR yes 49192523
chr4 3390848 3390863 IRF9 JASPAR yes 87902476
chr4 3390873 3390878 ETS2 TRANSFAC yes 49192524
chr4 3390873 3390878 ETS2 TRANSFAC yes 87902477
chr4 3390873 3390881 FEV JASPAR yes 49192525
chr4 3390873 3390881 FEV JASPAR yes 87902478
chr4 3390874 3390881 SPI1 JASPAR yes 49192526
chr4 3390874 3390881 SPI1 JASPAR yes 87902479
chr4 3390887 3390902 MEF2A JASPAR yes 49192527
chr4 3390887 3390902 MEF2A JASPAR yes 87902480
chr4 3390888 3390903 MEF2C JASPAR yes 49192528
chr4 3390888 3390903 MEF2C JASPAR yes 87902481
chr4 3390891 3390895 YY1 TRANSFAC yes 49192529
chr4 3390891 3390895 YY1 TRANSFAC yes 87902482
chr4 3390893 3390903 NFIA JASPAR yes 49192530
chr4 3390893 3390903 NFIA JASPAR yes 87902483
chr4 3390895 3390901 NFIC JASPAR yes 49192531
chr4 3390895 3390901 NFIC JASPAR yes 87902484
chr4 3390903 3390909 SOX10 JASPAR yes 49192532
chr4 3390903 3390909 SOX10 JASPAR yes 87902485
chr4 3390918 3390933 FOXP1 JASPAR yes 49192533
chr4 3390918 3390933 FOXP1 JASPAR yes 87902486
chr4 3390920 3390941 IRF1 JASPAR yes 49192534
chr4 3390920 3390941 IRF1 JASPAR yes 87902487
chr4 3390922 3390937 PRDM1 JASPAR yes 49192535
chr4 3390922 3390937 PRDM1 JASPAR yes 87902488
chr4 3390924 3390936 IRF1 JASPAR yes 49192536
chr4 3390924 3390936 IRF1 JASPAR yes 87902489
chr4 3390924 3390938 IRF7 JASPAR yes 49192537
chr4 3390924 3390938 IRF7 JASPAR yes 87902490
chr4 3390982 3390994 TFAP2B JASPAR yes 49192538
chr4 3390982 3390994 TFAP2C JASPAR yes 49192539
chr4 3390982 3390994 TFAP2B JASPAR yes 87902491
chr4 3390982 3390994 TFAP2C JASPAR yes 87902492
chr4 3390982 3390997 TFAP2A JASPAR yes 49192540
chr4 3390982 3390997 TFAP2C JASPAR yes 49192541
chr4 3390982 3390997 TFAP2A JASPAR yes 87902493
chr4 3390982 3390997 TFAP2C JASPAR yes 87902494
chr4 3391001 3391011 FIGLA JASPAR yes 49192542
chr4 3391001 3391011 MSC JASPAR yes 49192543
chr4 3391001 3391011 TFAP4 JASPAR yes 49192544
chr4 3391001 3391011 FIGLA JASPAR yes 87902495
chr4 3391001 3391011 MSC JASPAR yes 87902496
chr4 3391001 3391011 TFAP4 JASPAR yes 87902497
chr4 3391001 3391013 TAL1 JASPAR yes 49192545
chr4 3391001 3391013 TAL1 JASPAR yes 87902498
chr4 3391007 3391026 CTCF JASPAR yes 49192546
chr4 3391007 3391026 CTCF JASPAR yes 87902499
chr4 3391008 3391022 EBF1 JASPAR yes 49192547
chr4 3391008 3391022 EBF1 JASPAR yes 87902500
chr4 3391009 3391023 GLIS3 JASPAR yes 49192548
chr4 3391009 3391023 GLIS3 JASPAR yes 87902501
chr4 3391010 3391021 EBF1 JASPAR yes 49192549
chr4 3391010 3391021 EBF1 JASPAR yes 87902502
chr4 3391018 3391022 LFA1 TRANSFAC yes 49192550
chr4 3391018 3391022 LFA1 TRANSFAC yes 87902503
chr4 3391024 3391044 RREB1 JASPAR yes 49192551
chr4 3391024 3391044 RREB1 JASPAR yes 87902504
chr4 3391028 3391048 RREB1 JASPAR yes 49192552
chr4 3391028 3391048 RREB1 JASPAR yes 87902505
chr4 3391033 3391043 SP1 JASPAR yes 49192553
chr4 3391033 3391043 SP1 JASPAR yes 87902506
chr4 3391036 3391041 SP1 TRANSFAC yes 49192554
chr4 3391036 3391041 SP1 TRANSFAC yes 87902507
chr4 3391038 3391053 NR2C2 JASPAR yes 49192555
chr4 3391038 3391053 NR2C2 JASPAR yes 87902508
chr4 3391039 3391049 SP1 JASPAR yes 49192556
chr4 3391039 3391049 SP1 JASPAR yes 87902509
chr4 3391040 3391050 SP1 JASPAR yes 49192557
chr4 3391040 3391050 SP1 JASPAR yes 87902510
chr4 3391041 3391045 LFA1 TRANSFAC yes 49192558
chr4 3391041 3391045 LFA1 TRANSFAC yes 87902511
chr4 3391045 3391060 HNF4G JASPAR yes 49192559
chr4 3391045 3391060 HNF4G JASPAR yes 87902512
chr4 3391069 3391074 ETS2 TRANSFAC yes 49192560
chr4 3391069 3391074 ETS2 TRANSFAC yes 87902513
chr4 3391075 3391088 HSF1 JASPAR yes 49192561
chr4 3391075 3391088 HSF2 JASPAR yes 49192562
chr4 3391075 3391088 HSF1 JASPAR yes 87902514
chr4 3391075 3391088 HSF2 JASPAR yes 87902515
chr4 3391076 3391086 TEAD4 JASPAR yes 49192563
chr4 3391076 3391086 TEAD4 JASPAR yes 87902516
chr4 3391086 3391090 YY1 TRANSFAC yes 49192564
chr4 3391086 3391090 YY1 TRANSFAC yes 87902517
SNP sites on vista43956[chr4:3390647-3391111]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3390900 rs12649466 C A
MEF2A MEF2C NFIA NFIC
7357335
chr4 3390999 rs368222446 G C no 7357336
chr4 3391014 rs527526895 C T
CTCF EBF1 GLIS3
7357337
Genes possibly regulated by vista43956[chr4:3390647-3391111]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 4108
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 47497
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 26078
Expression level of Genes
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miRNAs possibly regulated by vista43956[chr4:3390647-3391111]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results