EnhancerDB
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  3. vista43957[chr4:3391112-3391254]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43957[chr4:3391112-3391254]
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Tissue distribution of vista43957
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Transcription factor that possibly regulate vista43957[chr4:3391112-3391254]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3391125 3391130 ETS2 TRANSFAC yes 49192565
chr4 3391125 3391130 ETS2 TRANSFAC yes 87902518
chr4 3391133 3391153 TBX19 JASPAR yes 49192566
chr4 3391133 3391153 TBX19 JASPAR yes 87902519
chr4 3391142 3391153 TBX20 JASPAR yes 49192567
chr4 3391142 3391153 TBX20 JASPAR yes 87902520
chr4 3391143 3391151 MGA JASPAR yes 49192568
chr4 3391143 3391151 TBX15 JASPAR yes 49192569
chr4 3391143 3391151 TBX1 JASPAR yes 49192570
chr4 3391143 3391151 TBX4 JASPAR yes 49192571
chr4 3391143 3391151 TBX5 JASPAR yes 49192572
chr4 3391143 3391151 MGA JASPAR yes 87902521
chr4 3391143 3391151 TBX15 JASPAR yes 87902522
chr4 3391143 3391151 TBX1 JASPAR yes 87902523
chr4 3391143 3391151 TBX4 JASPAR yes 87902524
chr4 3391143 3391151 TBX5 JASPAR yes 87902525
chr4 3391148 3391169 ZNF263 JASPAR yes 49192573
chr4 3391148 3391169 ZNF263 JASPAR yes 87902526
chr4 3391159 3391170 E2F6 JASPAR yes 49192574
chr4 3391159 3391170 E2F6 JASPAR yes 87902527
chr4 3391170 3391180 SP1 JASPAR yes 49192575
chr4 3391170 3391180 SP1 JASPAR yes 87902528
chr4 3391180 3391201 ZNF263 JASPAR yes 49192576
chr4 3391180 3391201 ZNF263 JASPAR yes 87902529
chr4 3391182 3391188 HiNF-A TRANSFAC yes 49192577
chr4 3391182 3391188 HiNF-A TRANSFAC yes 87902530
chr4 3391193 3391198 ETS2 TRANSFAC yes 49192578
chr4 3391193 3391198 ETS2 TRANSFAC yes 87902531
chr4 3391215 3391222 NFATC2 JASPAR yes 49192579
chr4 3391215 3391222 NFATC2 JASPAR yes 87902532
chr4 3391216 3391230 STAT1 JASPAR yes 49192580
chr4 3391216 3391230 STAT1 JASPAR yes 87902533
chr4 3391216 3391231 STAT2 JASPAR yes 49192581
chr4 3391216 3391231 STAT2 JASPAR yes 87902534
chr4 3391217 3391231 STAT1 JASPAR yes 49192582
chr4 3391217 3391231 STAT1 JASPAR yes 87902535
chr4 3391220 3391238 RARA JASPAR yes 49192583
chr4 3391220 3391238 RARA JASPAR yes 87902536
chr4 3391221 3391226 ETS2 TRANSFAC yes 49192584
chr4 3391221 3391226 ETS2 TRANSFAC yes 87902537
chr4 3391224 3391238 RXRB JASPAR yes 49192585
chr4 3391224 3391238 RXRB JASPAR yes 87902538
chr4 3391246 3391265 REST JASPAR yes 49192586
chr4 3391246 3391265 REST JASPAR yes 87902539
SNP sites on vista43957[chr4:3391112-3391254]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3391202 rs16844260 T C no 7357338
Genes possibly regulated by vista43957[chr4:3391112-3391254]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3294755 3441640 + RGS12 ENSG00000159788.14 3294755 0.75 1.0 4483 3643
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 47640
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 26221
Expression level of Genes
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miRNAs possibly regulated by vista43957[chr4:3391112-3391254]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results