EnhancerDB
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  3. vista43960[chr4:3463022-3463837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43960[chr4:3463022-3463837]
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Tissue distribution of vista43960
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Transcription factor that possibly regulate vista43960[chr4:3463022-3463837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3463082 3463732 ESR1 UCSC Txn Factor no Conserved 108531896
chr4 3463286 3463686 E2F1 UCSC Txn Factor no Conserved 108531897
chr4 3463027 3463048 ZNF263 JASPAR yes 49192672
chr4 3463052 3463070 ESR1 JASPAR yes 49192673
chr4 3463077 3463081 H1TF2 TRANSFAC yes 49192674
chr4 3463077 3463081 NFE TRANSFAC yes 49192675
chr4 3463077 3463081 SRF TRANSFAC yes 49192676
chr4 3463087 3463095 EHF JASPAR yes 49192677
chr4 3463109 3463113 YY1 TRANSFAC yes 49192678
chr4 3463109 3463120 CEBPB JASPAR yes 49192679
chr4 3463117 3463121 YY1 TRANSFAC yes 49192680
chr4 3463137 3463144 GATA1 TRANSFAC yes 49192681
chr4 3463140 3463144 TEAD2 TRANSFAC yes 49192682
chr4 3463142 3463145 MYB TRANSFAC yes 49192683
chr4 3463149 3463154 TFAP2A TRANSFAC yes 49192684
chr4 3463149 3463155 MZF1 JASPAR yes 49192685
chr4 3463152 3463167 HSF1 JASPAR yes 49192686
chr4 3463153 3463166 HSF4 JASPAR yes 49192687
chr4 3463162 3463169 GATA1 TRANSFAC yes 49192688
chr4 3463165 3463169 TEAD2 TRANSFAC yes 49192689
chr4 3463167 3463170 MYB TRANSFAC yes 49192690
chr4 3463188 3463192 LFA1 TRANSFAC yes 49192691
chr4 3463190 3463209 REST JASPAR yes 49192692
chr4 3463202 3463213 ESRRA JASPAR yes 49192693
chr4 3463203 3463221 ESR1 JASPAR yes 49192694
chr4 3463203 3463221 ESR2 JASPAR yes 49192695
chr4 3463204 3463221 ESR1 JASPAR yes 49192696
chr4 3463205 3463220 ESR2 JASPAR yes 49192697
chr4 3463205 3463225 ESR1 JASPAR yes 49192698
chr4 3463206 3463210 ESR1 TRANSFAC yes 49192699
chr4 3463232 3463245 SMAD2 JASPAR yes 49192700
chr4 3463250 3463260 SP1 JASPAR yes 49192701
chr4 3463250 3463269 CTCF JASPAR yes 49192702
chr4 3463259 3463274 HSF1 JASPAR yes 49192703
chr4 3463261 3463272 FLI1 JASPAR yes 49192704
chr4 3463287 3463302 TFAP2A JASPAR yes 49192705
chr4 3463287 3463302 TFAP2C JASPAR yes 49192706
chr4 3463309 3463314 ETS2 TRANSFAC yes 49192707
chr4 3463324 3463336 TFAP2A JASPAR yes 49192708
chr4 3463325 3463336 TFAP2A JASPAR yes 49192709
chr4 3463325 3463336 TFAP2B JASPAR yes 49192710
chr4 3463352 3463364 GLI2 JASPAR yes 49192711
chr4 3463361 3463370 SNAI2 JASPAR yes 49192712
chr4 3463361 3463371 ID4 JASPAR yes 49192713
chr4 3463361 3463371 TCF3 JASPAR yes 49192714
chr4 3463361 3463371 TCF4 JASPAR yes 49192715
chr4 3463367 3463377 NHLH1 JASPAR yes 49192716
chr4 3463370 3463383 SMAD2 JASPAR yes 49192717
chr4 3463402 3463423 REST JASPAR yes 49192718
chr4 3463409 3463421 TEAD1 JASPAR yes 49192719
chr4 3463412 3463420 TEAD3 JASPAR yes 49192720
chr4 3463445 3463450 GATA2 JASPAR yes 49192721
chr4 3463449 3463461 HES5 JASPAR yes 49192722
chr4 3463464 3463473 TFAP2A JASPAR yes 49192723
chr4 3463469 3463473 LFA1 TRANSFAC yes 49192724
chr4 3463473 3463483 ETS1 JASPAR yes 49192725
chr4 3463473 3463483 ETV1 JASPAR yes 49192726
chr4 3463473 3463483 ETV3 JASPAR yes 49192727
chr4 3463473 3463483 ETV4 JASPAR yes 49192728
chr4 3463473 3463483 ETV5 JASPAR yes 49192729
chr4 3463479 3463494 RUNX2 JASPAR yes 49192730
chr4 3463494 3463507 TFAP2A JASPAR yes 49192731
chr4 3463506 3463512 SP1 TRANSFAC yes 49192732
chr4 3463506 3463516 SP1 JASPAR yes 49192733
chr4 3463523 3463527 NFE TRANSFAC yes 49192734
chr4 3463535 3463549 EBF1 JASPAR yes 49192735
chr4 3463537 3463548 EBF1 JASPAR yes 49192736
chr4 3463543 3463557 PLAG1 JASPAR yes 49192737
chr4 3463544 3463549 SP1 TRANSFAC yes 49192738
chr4 3463559 3463564 TFAP2A TRANSFAC yes 49192739
chr4 3463559 3463565 MZF1 JASPAR yes 49192740
chr4 3463570 3463590 PPARG JASPAR yes 49192741
chr4 3463571 3463589 ESR2 JASPAR yes 49192742
chr4 3463572 3463590 ESR1 JASPAR yes 49192743
chr4 3463572 3463590 ESR2 JASPAR yes 49192744
chr4 3463573 3463588 ESR2 JASPAR yes 49192745
chr4 3463573 3463593 ESR1 JASPAR yes 49192746
chr4 3463581 3463592 NFE2L2 JASPAR yes 49192747
chr4 3463583 3463599 SOX4 JASPAR yes 49192748
chr4 3463588 3463598 MYF6 JASPAR yes 49192749
chr4 3463601 3463607 ETS1 JASPAR yes 49192750
chr4 3463601 3463607 SPI1 JASPAR yes 49192751
chr4 3463605 3463610 SP1 TRANSFAC yes 49192752
chr4 3463629 3463649 RREB1 JASPAR yes 49192753
chr4 3463633 3463653 RREB1 JASPAR yes 49192754
chr4 3463634 3463644 SP1 JASPAR yes 49192755
chr4 3463636 3463650 PLAG1 JASPAR yes 49192756
chr4 3463637 3463642 SP1 TRANSFAC yes 49192757
chr4 3463638 3463648 SP1 JASPAR yes 49192758
chr4 3463641 3463646 SP1 TRANSFAC yes 49192759
chr4 3463659 3463670 FLI1 JASPAR yes 49192760
chr4 3463660 3463673 ELF1 JASPAR yes 49192761
chr4 3463680 3463686 SP1 TRANSFAC yes 49192762
chr4 3463752 3463756 NFE TRANSFAC yes 49192763
chr4 3463770 3463774 LFA1 TRANSFAC yes 49192764
chr4 3463775 3463785 ZNF740 JASPAR yes 49192765
chr4 3463776 3463781 TFAP2A TRANSFAC yes 49192766
chr4 3463776 3463782 MZF1 JASPAR yes 49192767
chr4 3463776 3463786 SP1 JASPAR yes 49192768
chr4 3463778 3463784 MAZ TRANSFAC yes 49192769
chr4 3463787 3463796 TFAP2A JASPAR yes 49192770
chr4 3463814 3463828 NR2F1 JASPAR yes 49192771
chr4 3463819 3463832 NR2F1 JASPAR yes 49192772
chr4 3463820 3463828 CREB1 JASPAR yes 49192773
chr4 3463823 3463827 ESR1 TRANSFAC yes 49192774
SNP sites on vista43960[chr4:3463022-3463837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3463221 rs141491753 C A,G,T
ESR1 ESR2
7357700
chr4 3463260 rs566380127 C G
CTCF ESR1 HSF1 SP1
7357701
chr4 3463400 rs73079075 C T
E2F1 ESR1
7357702
chr4 3463430 rs554416807 C G
E2F1 ESR1
7357703
chr4 3463452 rs1203104 G A,C
E2F1 ESR1 HES5
7357704
chr4 3463476 rs577585494 C T
E2F1 ESR1 ETS1 ETV1 ETV3 ETV4 ETV5
7357705
chr4 3463477 rs28478452 G A
E2F1 ESR1 ETS1 ETV1 ETV3 ETV4 ETV5
7357706
chr4 3463521 rs112154913 C G,T
E2F1 ESR1
7357707
chr4 3463546 rs561999793 G T
E2F1 EBF1 ESR1 PLAG1 SP1
7357708
chr4 3463603 rs28413474 G A
E2F1 ESR1 ETS1 SPI1
7357709
chr4 3463632 rs532257387 T G
E2F1 ESR1 RREB1
7357710
chr4 3463637 rs138728321 G A
E2F1 ESR1 PLAG1 RREB1 SP1
7357711
chr4 3463646 rs188257066 G C
E2F1 ESR1 PLAG1 RREB1 SP1
7357712
chr4 3463711 rs180776282 T A
ESR1
7357713
chr4 3463715 rs533910965 C T
ESR1
7357714
chr4 3463727 rs7667834 G A
ESR1
7357715
chr4 3463832 rs149365364 G A
NR2F1
7357716
chr4 3463834 rs143721670 T C no 7357717
Genes possibly regulated by vista43960[chr4:3463022-3463837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 80592
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 98804
chr4 3508103 3534286 - LRPAP1 ENSG00000163956.6 3534286 0.76 1.0 4486 29551
chr4 3511523 3511678 - AL590235.1 ENSG00000268781.1 3511678 0.0 1.0 4487 52159
Expression level of Genes
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miRNAs possibly regulated by vista43960[chr4:3463022-3463837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results