EnhancerDB
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  3. vista43962[chr4:3469404-3469760]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43962[chr4:3469404-3469760]
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Tissue distribution of vista43962
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Transcription factor that possibly regulate vista43962[chr4:3469404-3469760]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3469414 3469418 NFE TRANSFAC yes 49192872
chr4 3469414 3469418 NFE TRANSFAC yes 87906281
chr4 3469426 3469431 SP1 TRANSFAC yes 49192873
chr4 3469426 3469431 SP1 TRANSFAC yes 87906282
chr4 3469454 3469459 SP1 TRANSFAC yes 49192874
chr4 3469454 3469459 SP1 TRANSFAC yes 87906283
chr4 3469475 3469491 SOX8 JASPAR yes 49192875
chr4 3469475 3469491 SOX8 JASPAR yes 87906284
chr4 3469475 3469496 REST JASPAR yes 49192876
chr4 3469475 3469496 REST JASPAR yes 87906285
chr4 3469488 3469500 INSM1 JASPAR yes 49192877
chr4 3469488 3469500 INSM1 JASPAR yes 87906286
chr4 3469501 3469516 HNF4A JASPAR yes 49192878
chr4 3469501 3469516 HNF4A JASPAR yes 87906287
chr4 3469503 3469507 H4TF2 TRANSFAC yes 49192879
chr4 3469503 3469507 H4TF2 TRANSFAC yes 87906288
chr4 3469507 3469522 LEF1 JASPAR yes 49192880
chr4 3469507 3469522 LEF1 JASPAR yes 87906289
chr4 3469554 3469564 TFE3 JASPAR yes 49192881
chr4 3469554 3469564 TFE3 JASPAR yes 87906290
chr4 3469554 3469569 ZBTB33 JASPAR yes 49192882
chr4 3469554 3469569 ZBTB33 JASPAR yes 87906291
chr4 3469585 3469606 IRF1 JASPAR yes 49192883
chr4 3469585 3469606 IRF1 JASPAR yes 87906292
chr4 3469587 3469602 PRDM1 JASPAR yes 49192884
chr4 3469587 3469602 PRDM1 JASPAR yes 87906293
chr4 3469595 3469613 SRF JASPAR yes 49192885
chr4 3469595 3469613 SRF JASPAR yes 87906294
chr4 3469596 3469600 NFE TRANSFAC yes 49192886
chr4 3469596 3469600 NFE TRANSFAC yes 87906295
chr4 3469597 3469613 SRF JASPAR yes 49192887
chr4 3469597 3469613 SRF JASPAR yes 87906296
chr4 3469597 3469615 SRF JASPAR yes 49192888
chr4 3469597 3469615 SRF JASPAR yes 87906297
chr4 3469598 3469610 SRF JASPAR yes 49192889
chr4 3469598 3469610 SRF JASPAR yes 87906298
chr4 3469600 3469609 SRF TRANSFAC yes 49192890
chr4 3469600 3469609 SRF TRANSFAC yes 87906299
chr4 3469600 3469612 SRF JASPAR yes 49192891
chr4 3469600 3469612 SRF JASPAR yes 87906300
chr4 3469605 3469626 ZNF263 JASPAR yes 49192892
chr4 3469605 3469626 ZNF263 JASPAR yes 87906301
chr4 3469611 3469621 MZF1 JASPAR yes 49192893
chr4 3469611 3469621 MZF1 JASPAR yes 87906302
chr4 3469614 3469627 ELF1 JASPAR yes 49192894
chr4 3469614 3469627 ELF1 JASPAR yes 87906303
chr4 3469617 3469623 PEA3 TRANSFAC yes 49192895
chr4 3469617 3469623 PEA3 TRANSFAC yes 87906304
chr4 3469617 3469628 FLI1 JASPAR yes 49192896
chr4 3469617 3469628 FLI1 JASPAR yes 87906305
chr4 3469625 3469637 TFAP2A JASPAR yes 49192897
chr4 3469625 3469637 TFAP2B JASPAR yes 49192898
chr4 3469625 3469637 TFAP2C JASPAR yes 49192899
chr4 3469625 3469637 TFAP2A JASPAR yes 87906306
chr4 3469625 3469637 TFAP2B JASPAR yes 87906307
chr4 3469625 3469637 TFAP2C JASPAR yes 87906308
chr4 3469625 3469640 TFAP2C JASPAR yes 49192900
chr4 3469625 3469640 TFAP2C JASPAR yes 87906309
chr4 3469626 3469635 TFAP2A JASPAR yes 49192901
chr4 3469626 3469635 TFAP2A JASPAR yes 87906310
chr4 3469626 3469637 EBF1 JASPAR yes 49192902
chr4 3469626 3469637 EBF1 JASPAR yes 87906311
chr4 3469627 3469636 TFAP2A JASPAR yes 49192903
chr4 3469627 3469636 TFAP2A JASPAR yes 87906312
chr4 3469631 3469636 SP1 TRANSFAC yes 49192904
chr4 3469631 3469636 SP1 TRANSFAC yes 87906313
chr4 3469652 3469656 H4TF2 TRANSFAC yes 49192905
chr4 3469652 3469656 H4TF2 TRANSFAC yes 87906314
chr4 3469674 3469689 JUND JASPAR yes 49192906
chr4 3469674 3469689 JUND JASPAR yes 87906315
chr4 3469675 3469688 JUN JASPAR yes 49192907
chr4 3469675 3469688 NR2F1 JASPAR yes 49192908
chr4 3469675 3469688 JUN JASPAR yes 87906316
chr4 3469675 3469688 NR2F1 JASPAR yes 87906317
chr4 3469676 3469690 ATF7 JASPAR yes 49192909
chr4 3469676 3469690 BATF3 JASPAR yes 49192910
chr4 3469676 3469690 ATF7 JASPAR yes 87906318
chr4 3469676 3469690 BATF3 JASPAR yes 87906319
chr4 3469677 3469689 JDP2 JASPAR yes 49192911
chr4 3469677 3469689 JDP2 JASPAR yes 87906320
chr4 3469677 3469692 JUND JASPAR yes 49192912
chr4 3469677 3469692 JUND JASPAR yes 87906321
chr4 3469678 3469691 JUN JASPAR yes 49192913
chr4 3469678 3469691 JUN JASPAR yes 87906322
chr4 3469679 3469687 CREB1 JASPAR yes 49192914
chr4 3469679 3469687 CREB1 JASPAR yes 87906323
chr4 3469701 3469721 RREB1 JASPAR yes 49192915
chr4 3469701 3469721 RREB1 JASPAR yes 87906324
chr4 3469710 3469713 MYB TRANSFAC yes 49192916
chr4 3469710 3469713 MYB TRANSFAC yes 87906325
chr4 3469718 3469730 TFAP2A JASPAR yes 49192917
chr4 3469718 3469730 TFAP2B JASPAR yes 49192918
chr4 3469718 3469730 TFAP2C JASPAR yes 49192919
chr4 3469718 3469730 TFAP2A JASPAR yes 87906326
chr4 3469718 3469730 TFAP2B JASPAR yes 87906327
chr4 3469718 3469730 TFAP2C JASPAR yes 87906328
chr4 3469733 3469738 H4TF1 TRANSFAC yes 49192920
chr4 3469733 3469738 H4TF1 TRANSFAC yes 87906329
chr4 3469733 3469744 CEBPB JASPAR yes 49192921
chr4 3469733 3469744 CEBPB JASPAR yes 87906330
chr4 3469739 3469754 SOX21 JASPAR yes 49192922
chr4 3469739 3469754 SOX21 JASPAR yes 87906331
chr4 3469739 3469755 SOX4 JASPAR yes 49192923
chr4 3469739 3469755 SOX4 JASPAR yes 87906332
chr4 3469747 3469761 IRF8 JASPAR yes 49192924
chr4 3469747 3469761 IRF8 JASPAR yes 87906333
SNP sites on vista43962[chr4:3469404-3469760]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3469409 rs185978198 G A,C no 7357771
chr4 3469443 rs10937927 A G no 7357772
chr4 3469458 rs10937928 C T
SP1
7357773
chr4 3469465 rs370772985 G C no 7357774
chr4 3469485 rs73195118 C A
REST SOX8
7357775
chr4 3469543 rs73079102 C T no 7357776
chr4 3469588 rs182528606 G A
IRF1 PRDM1
7357777
chr4 3469589 rs73195119 C T
IRF1 PRDM1
7357778
chr4 3469591 rs148594066 C T
IRF1 PRDM1
7357779
chr4 3469601 rs186948043 C T
IRF1 PRDM1 SRF
7357780
chr4 3469626 rs56266074 C T
EBF1 ELF1 FLI1 TFAP2A TFAP2B TFAP2C ZNF263
7357781
chr4 3469637 rs75709916 C T
EBF1 TFAP2A TFAP2B TFAP2C
7357782
Genes possibly regulated by vista43962[chr4:3469404-3469760]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 74210
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 95629
chr4 3508103 3534286 - LRPAP1 ENSG00000163956.6 3534286 0.76 1.0 4486 35474
chr4 3511523 3511678 - AL590235.1 ENSG00000268781.1 3511678 0.0 1.0 4487 58082
Expression level of Genes
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miRNAs possibly regulated by vista43962[chr4:3469404-3469760]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results