EnhancerDB
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  3. vista43964[chr4:3484611-3485071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43964[chr4:3484611-3485071]
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Tissue distribution of vista43964
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Transcription factor that possibly regulate vista43964[chr4:3484611-3485071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3484606 3484619 SMAD2 JASPAR yes 49192940
chr4 3484606 3484619 SMAD2 JASPAR yes 87907476
chr4 3484610 3484629 REST JASPAR yes 49192941
chr4 3484610 3484629 REST JASPAR yes 87907477
chr4 3484624 3484638 ZIC1 JASPAR yes 49192942
chr4 3484624 3484638 ZIC1 JASPAR yes 87907478
chr4 3484627 3484636 SNAI2 JASPAR yes 49192943
chr4 3484627 3484636 SNAI2 JASPAR yes 87907479
chr4 3484627 3484637 TCF3 JASPAR yes 49192944
chr4 3484627 3484637 TCF4 JASPAR yes 49192945
chr4 3484627 3484637 TCF3 JASPAR yes 87907480
chr4 3484627 3484637 TCF4 JASPAR yes 87907481
chr4 3484629 3484638 ZEB1 JASPAR yes 49192946
chr4 3484629 3484638 ZEB1 JASPAR yes 87907482
chr4 3484631 3484636 SP1 TRANSFAC yes 49192947
chr4 3484631 3484636 SP1 TRANSFAC yes 87907483
chr4 3484676 3484690 PLAG1 JASPAR yes 49192948
chr4 3484676 3484690 PLAG1 JASPAR yes 87907484
chr4 3484680 3484684 NFE TRANSFAC yes 49192949
chr4 3484680 3484684 NFE TRANSFAC yes 87907485
chr4 3484683 3484696 NR2F1 JASPAR yes 49192950
chr4 3484683 3484696 NR2F1 JASPAR yes 87907486
chr4 3484686 3484707 ZNF263 JASPAR yes 49192951
chr4 3484686 3484707 ZNF263 JASPAR yes 87907487
chr4 3484687 3484691 ESR1 TRANSFAC yes 49192952
chr4 3484687 3484691 ESR1 TRANSFAC yes 87907488
chr4 3484693 3484707 PLAG1 JASPAR yes 49192953
chr4 3484693 3484707 PLAG1 JASPAR yes 87907489
chr4 3484702 3484717 HNF4G JASPAR yes 49192954
chr4 3484702 3484717 HNF4G JASPAR yes 87907490
chr4 3484703 3484708 SP1 TRANSFAC yes 49192955
chr4 3484703 3484708 SP1 TRANSFAC yes 87907491
chr4 3484703 3484717 NR2F1 JASPAR yes 49192956
chr4 3484703 3484717 NR2F1 JASPAR yes 87907492
chr4 3484703 3484718 HNF4A JASPAR yes 49192957
chr4 3484703 3484718 HNF4A JASPAR yes 87907493
chr4 3484704 3484718 TLX1 JASPAR yes 49192958
chr4 3484704 3484718 TLX1 JASPAR yes 87907494
chr4 3484704 3484719 TFAP2C JASPAR yes 49192959
chr4 3484704 3484719 TFAP2C JASPAR yes 87907495
chr4 3484728 3484734 TCF4 TRANSFAC yes 49192960
chr4 3484728 3484734 TCF4 TRANSFAC yes 87907496
chr4 3484729 3484741 PKNOX1 JASPAR yes 49192961
chr4 3484729 3484741 TGIF1 JASPAR yes 49192962
chr4 3484729 3484741 TGIF2 JASPAR yes 49192963
chr4 3484729 3484741 PKNOX1 JASPAR yes 87907497
chr4 3484729 3484741 TGIF1 JASPAR yes 87907498
chr4 3484729 3484741 TGIF2 JASPAR yes 87907499
chr4 3484734 3484746 IRF1 JASPAR yes 49192964
chr4 3484734 3484746 IRF1 JASPAR yes 87907500
chr4 3484745 3484755 SREBF1 JASPAR yes 49192965
chr4 3484745 3484755 SREBF1 JASPAR yes 87907501
chr4 3484753 3484768 HSF1 JASPAR yes 49192966
chr4 3484753 3484768 HSF1 JASPAR yes 87907502
chr4 3484779 3484793 PLAG1 JASPAR yes 49192967
chr4 3484779 3484793 PLAG1 JASPAR yes 87907503
chr4 3484786 3484806 RREB1 JASPAR yes 49192968
chr4 3484786 3484806 RREB1 JASPAR yes 87907504
chr4 3484787 3484807 RREB1 JASPAR yes 49192969
chr4 3484787 3484807 RREB1 JASPAR yes 87907505
chr4 3484788 3484809 ZNF263 JASPAR yes 49192970
chr4 3484788 3484809 ZNF263 JASPAR yes 87907506
chr4 3484798 3484803 SP1 TRANSFAC yes 49192971
chr4 3484798 3484803 SP1 TRANSFAC yes 87907507
chr4 3484799 3484809 ZNF740 JASPAR yes 49192972
chr4 3484799 3484809 ZNF740 JASPAR yes 87907508
chr4 3484803 3484816 SMAD2 JASPAR yes 49192973
chr4 3484803 3484816 SMAD2 JASPAR yes 87907509
chr4 3484827 3484847 RREB1 JASPAR yes 49192974
chr4 3484827 3484847 RREB1 JASPAR yes 87907510
chr4 3484830 3484850 RREB1 JASPAR yes 49192975
chr4 3484830 3484850 RREB1 JASPAR yes 87907511
chr4 3484832 3484853 ZNF263 JASPAR yes 49192976
chr4 3484832 3484853 ZNF263 JASPAR yes 87907512
chr4 3484842 3484847 SP1 TRANSFAC yes 49192977
chr4 3484842 3484847 SP1 TRANSFAC yes 87907513
chr4 3484844 3484849 TFAP2A TRANSFAC yes 49192978
chr4 3484844 3484849 TFAP2A TRANSFAC yes 87907514
chr4 3484844 3484850 MZF1 JASPAR yes 49192979
chr4 3484844 3484850 MZF1 JASPAR yes 87907515
chr4 3484871 3484891 RREB1 JASPAR yes 49192980
chr4 3484871 3484891 RREB1 JASPAR yes 87907516
chr4 3484874 3484894 RREB1 JASPAR yes 49192981
chr4 3484874 3484894 RREB1 JASPAR yes 87907517
chr4 3484876 3484897 ZNF263 JASPAR yes 49192982
chr4 3484876 3484897 ZNF263 JASPAR yes 87907518
chr4 3484886 3484891 SP1 TRANSFAC yes 49192983
chr4 3484886 3484891 SP1 TRANSFAC yes 87907519
chr4 3484888 3484893 TFAP2A TRANSFAC yes 49192984
chr4 3484888 3484893 TFAP2A TRANSFAC yes 87907520
chr4 3484888 3484894 MZF1 JASPAR yes 49192985
chr4 3484888 3484894 MZF1 JASPAR yes 87907521
chr4 3484915 3484935 RREB1 JASPAR yes 49192986
chr4 3484915 3484935 RREB1 JASPAR yes 87907522
chr4 3484918 3484938 RREB1 JASPAR yes 49192987
chr4 3484918 3484938 RREB1 JASPAR yes 87907523
chr4 3484920 3484941 ZNF263 JASPAR yes 49192988
chr4 3484920 3484941 ZNF263 JASPAR yes 87907524
chr4 3484930 3484935 SP1 TRANSFAC yes 49192989
chr4 3484930 3484935 SP1 TRANSFAC yes 87907525
chr4 3484932 3484937 TFAP2A TRANSFAC yes 49192990
chr4 3484932 3484937 TFAP2A TRANSFAC yes 87907526
chr4 3484932 3484938 MZF1 JASPAR yes 49192991
chr4 3484932 3484938 MZF1 JASPAR yes 87907527
chr4 3484959 3484979 RREB1 JASPAR yes 49192992
chr4 3484959 3484979 RREB1 JASPAR yes 87907528
chr4 3484962 3484982 RREB1 JASPAR yes 49192993
chr4 3484962 3484982 RREB1 JASPAR yes 87907529
chr4 3484964 3484985 ZNF263 JASPAR yes 49192994
chr4 3484964 3484985 ZNF263 JASPAR yes 87907530
chr4 3484974 3484979 SP1 TRANSFAC yes 49192995
chr4 3484974 3484979 SP1 TRANSFAC yes 87907531
chr4 3484976 3484981 TFAP2A TRANSFAC yes 49192996
chr4 3484976 3484981 TFAP2A TRANSFAC yes 87907532
chr4 3484976 3484982 MZF1 JASPAR yes 49192997
chr4 3484976 3484982 MZF1 JASPAR yes 87907533
chr4 3485001 3485007 YY1 JASPAR yes 49192998
chr4 3485001 3485007 YY1 JASPAR yes 87907534
chr4 3485001 3485019 ESR2 JASPAR yes 49192999
chr4 3485001 3485019 ESR2 JASPAR yes 87907535
chr4 3485002 3485017 ESR2 JASPAR yes 49193000
chr4 3485002 3485017 ESR2 JASPAR yes 87907536
chr4 3485002 3485022 ESR1 JASPAR yes 49193001
chr4 3485002 3485022 ESR1 JASPAR yes 87907537
chr4 3485051 3485071 RREB1 JASPAR yes 49193002
chr4 3485051 3485071 RREB1 JASPAR yes 87907538
chr4 3485055 3485065 SP1 JASPAR yes 49193003
chr4 3485055 3485065 SP1 JASPAR yes 87907539
chr4 3485056 3485066 SP1 JASPAR yes 49193004
chr4 3485056 3485066 SP1 JASPAR yes 87907540
chr4 3485063 3485068 SP1 TRANSFAC yes 49193005
chr4 3485063 3485068 SP1 TRANSFAC yes 87907541
chr4 3485066 3485076 SP1 JASPAR yes 49193006
chr4 3485066 3485076 SP1 JASPAR yes 87907542
SNP sites on vista43964[chr4:3484611-3485071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3484619 rs190097989 C T
REST SMAD2
7358127
chr4 3484624 rs527741158 C T
REST ZIC1
7358128
chr4 3484625 rs538425989 G A,C
REST ZIC1
7358129
chr4 3484632 rs6847491 G C
SNAI2 SP1 TCF3 TCF4 ZEB1 ZIC1
7358130
chr4 3484657 rs182368767 G A no 7358131
chr4 3484678 rs111746167 G C
PLAG1
7358132
chr4 3484719 rs13118673 G A
TFAP2C
7358133
chr4 3484768 rs7676662 T C
HSF1
7358134
chr4 3484806 rs545091989 G A
RREB1 SMAD2 ZNF263 ZNF740
7358135
chr4 3484807 rs560314810 T C
RREB1 SMAD2 ZNF263 ZNF740
7358136
chr4 3484983 rs542071594 C T
ZNF263
7358137
chr4 3485052 rs2699436 C T
RREB1
7358138
chr4 3485054 rs6848329 G T
RREB1
7358139
chr4 3485066 rs564409309 T G
RREB1 SP1
7358140
Genes possibly regulated by vista43964[chr4:3484611-3485071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 59003
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 80422
chr4 3508103 3534286 - LRPAP1 ENSG00000163956.6 3534286 0.76 1.0 4486 50785
chr4 3511523 3511678 - AL590235.1 ENSG00000268781.1 3511678 0.0 1.0 4487 73393
chr4 3578596 3592438 + LINC00955 ENSG00000216560.4 3578596 1.0 1.0 4488 6475
Expression level of Genes
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miRNAs possibly regulated by vista43964[chr4:3484611-3485071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results