EnhancerDB
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  3. vista43966[chr4:3488499-3488826]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43966[chr4:3488499-3488826]
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Tissue distribution of vista43966
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Transcription factor that possibly regulate vista43966[chr4:3488499-3488826]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3488489 3488502 ZBTB18 JASPAR yes 49193021
chr4 3488489 3488502 ZBTB18 JASPAR yes 87908044
chr4 3488491 3488500 SNAI2 JASPAR yes 49193022
chr4 3488491 3488500 SNAI2 JASPAR yes 87908045
chr4 3488491 3488501 ID4 JASPAR yes 49193023
chr4 3488491 3488501 NHLH1 JASPAR yes 49193024
chr4 3488491 3488501 TCF3 JASPAR yes 49193025
chr4 3488491 3488501 TCF4 JASPAR yes 49193026
chr4 3488491 3488501 ID4 JASPAR yes 87908046
chr4 3488491 3488501 NHLH1 JASPAR yes 87908047
chr4 3488491 3488501 TCF3 JASPAR yes 87908048
chr4 3488491 3488501 TCF4 JASPAR yes 87908049
chr4 3488493 3488502 ZEB1 JASPAR yes 49193027
chr4 3488493 3488502 ZEB1 JASPAR yes 87908050
chr4 3488494 3488502 TBX5 JASPAR yes 49193028
chr4 3488494 3488502 TBX5 JASPAR yes 87908051
chr4 3488498 3488504 ZNF354C JASPAR yes 49193029
chr4 3488498 3488504 ZNF354C JASPAR yes 87908052
chr4 3488500 3488515 RUNX2 JASPAR yes 49193030
chr4 3488500 3488515 RUNX2 JASPAR yes 87908053
chr4 3488509 3488513 ESR1 TRANSFAC yes 49193031
chr4 3488509 3488513 ESR1 TRANSFAC yes 87908054
chr4 3488516 3488522 ZNF354C JASPAR yes 49193032
chr4 3488516 3488522 ZNF354C JASPAR yes 87908055
chr4 3488520 3488540 RREB1 JASPAR yes 49193033
chr4 3488520 3488540 RREB1 JASPAR yes 87908056
chr4 3488556 3488571 HNF4G JASPAR yes 49193034
chr4 3488556 3488571 HNF4G JASPAR yes 87908057
chr4 3488557 3488572 HNF4A JASPAR yes 49193035
chr4 3488557 3488572 HNF4A JASPAR yes 87908058
chr4 3488570 3488576 SP1 TRANSFAC yes 49193036
chr4 3488570 3488576 SP1 TRANSFAC yes 87908059
chr4 3488571 3488576 SP1 TRANSFAC yes 49193037
chr4 3488571 3488576 SP1 TRANSFAC yes 87908060
chr4 3488572 3488577 SP1 TRANSFAC yes 49193038
chr4 3488572 3488577 SP1 TRANSFAC yes 87908061
chr4 3488572 3488578 SP1 TRANSFAC yes 49193039
chr4 3488572 3488578 SP1 TRANSFAC yes 87908062
chr4 3488575 3488585 SP1 JASPAR yes 49193040
chr4 3488575 3488585 SP1 JASPAR yes 87908063
chr4 3488587 3488591 LFA1 TRANSFAC yes 49193041
chr4 3488587 3488591 LFA1 TRANSFAC yes 87908064
chr4 3488592 3488613 ZNF263 JASPAR yes 49193042
chr4 3488592 3488613 ZNF263 JASPAR yes 87908065
chr4 3488593 3488597 LFA1 TRANSFAC yes 49193043
chr4 3488593 3488597 LFA1 TRANSFAC yes 87908066
chr4 3488607 3488627 ESR1 JASPAR yes 49193044
chr4 3488607 3488627 ESR1 JASPAR yes 87908067
chr4 3488616 3488637 ZNF263 JASPAR yes 49193045
chr4 3488616 3488637 ZNF263 JASPAR yes 87908068
chr4 3488632 3488647 TFAP2C JASPAR yes 49193046
chr4 3488632 3488647 TFAP2C JASPAR yes 87908069
chr4 3488634 3488646 TFAP2A JASPAR yes 49193047
chr4 3488634 3488646 TFAP2B JASPAR yes 49193048
chr4 3488634 3488646 TFAP2C JASPAR yes 49193049
chr4 3488634 3488646 TFAP2A JASPAR yes 87908070
chr4 3488634 3488646 TFAP2B JASPAR yes 87908071
chr4 3488634 3488646 TFAP2C JASPAR yes 87908072
chr4 3488634 3488649 TFAP2A JASPAR yes 49193050
chr4 3488634 3488649 TFAP2C JASPAR yes 49193051
chr4 3488634 3488649 TFAP2A JASPAR yes 87908073
chr4 3488634 3488649 TFAP2C JASPAR yes 87908074
chr4 3488635 3488646 TFAP2A JASPAR yes 49193052
chr4 3488635 3488646 TFAP2B JASPAR yes 49193053
chr4 3488635 3488646 TFAP2C JASPAR yes 49193054
chr4 3488635 3488646 TFAP2A JASPAR yes 87908075
chr4 3488635 3488646 TFAP2B JASPAR yes 87908076
chr4 3488635 3488646 TFAP2C JASPAR yes 87908077
chr4 3488643 3488658 RFX5 JASPAR yes 49193055
chr4 3488643 3488658 RFX5 JASPAR yes 87908078
chr4 3488654 3488675 ZNF263 JASPAR yes 49193056
chr4 3488654 3488675 ZNF263 JASPAR yes 87908079
chr4 3488662 3488667 ETS2 TRANSFAC yes 49193057
chr4 3488662 3488667 ETS2 TRANSFAC yes 87908080
chr4 3488670 3488675 ETS2 TRANSFAC yes 49193058
chr4 3488670 3488675 ETS2 TRANSFAC yes 87908081
chr4 3488672 3488693 ZNF263 JASPAR yes 49193059
chr4 3488672 3488693 ZNF263 JASPAR yes 87908082
chr4 3488683 3488687 LFA1 TRANSFAC yes 49193060
chr4 3488683 3488687 LFA1 TRANSFAC yes 87908083
chr4 3488698 3488704 MAZ TRANSFAC yes 49193061
chr4 3488698 3488704 MAZ TRANSFAC yes 87908084
chr4 3488716 3488735 CTCF JASPAR yes 49193062
chr4 3488716 3488735 CTCF JASPAR yes 87908085
chr4 3488726 3488744 NR3C1 JASPAR yes 49193063
chr4 3488726 3488744 NR3C1 JASPAR yes 87908086
chr4 3488746 3488767 REST JASPAR yes 49193064
chr4 3488746 3488767 REST JASPAR yes 87908087
chr4 3488747 3488766 REST JASPAR yes 49193065
chr4 3488747 3488766 REST JASPAR yes 87908088
chr4 3488749 3488759 MAX JASPAR yes 49193066
chr4 3488749 3488759 MNT JASPAR yes 49193067
chr4 3488749 3488759 TFE3 JASPAR yes 49193068
chr4 3488749 3488759 MAX JASPAR yes 87908089
chr4 3488749 3488759 MNT JASPAR yes 87908090
chr4 3488749 3488759 TFE3 JASPAR yes 87908091
chr4 3488751 3488756 MYC TRANSFAC yes 49193069
chr4 3488751 3488756 USF1 TRANSFAC yes 49193070
chr4 3488751 3488756 USF2 TRANSFAC yes 49193071
chr4 3488751 3488756 MYC TRANSFAC yes 87908092
chr4 3488751 3488756 USF1 TRANSFAC yes 87908093
chr4 3488751 3488756 USF2 TRANSFAC yes 87908094
chr4 3488751 3488758 USF1 JASPAR yes 49193072
chr4 3488751 3488758 USF1 JASPAR yes 87908095
chr4 3488758 3488773 TFAP2C JASPAR yes 49193073
chr4 3488758 3488773 TFAP2C JASPAR yes 87908096
chr4 3488761 3488772 TFAP2A JASPAR yes 49193074
chr4 3488761 3488772 TFAP2B JASPAR yes 49193075
chr4 3488761 3488772 TFAP2C JASPAR yes 49193076
chr4 3488761 3488772 TFAP2A JASPAR yes 87908097
chr4 3488761 3488772 TFAP2B JASPAR yes 87908098
chr4 3488761 3488772 TFAP2C JASPAR yes 87908099
chr4 3488762 3488771 TFAP2A JASPAR yes 49193077
chr4 3488762 3488771 TFAP2A JASPAR yes 87908100
chr4 3488767 3488772 SP1 TRANSFAC yes 49193078
chr4 3488767 3488772 SP1 TRANSFAC yes 87908101
chr4 3488768 3488773 SP1 TRANSFAC yes 49193079
chr4 3488768 3488773 SP1 TRANSFAC yes 87908102
chr4 3488768 3488774 SP1 TRANSFAC yes 49193080
chr4 3488768 3488774 SP1 TRANSFAC yes 87908103
chr4 3488771 3488776 SP1 TRANSFAC yes 49193081
chr4 3488771 3488776 SP1 TRANSFAC yes 87908104
SNP sites on vista43966[chr4:3488499-3488826]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3488499 rs185265397 G A,C
ID4 NHLH1 SNAI2 TBX5 TCF3 TCF4 ZBTB18 ZEB1 ZNF354C
7358220
chr4 3488516 rs2239737 C T
ZNF354C
7358221
chr4 3488587 rs150221851 CGGGCA C
LFA1
7358222
chr4 3488721 rs148891268 C A
CTCF
7358223
chr4 3488736 rs143610451 G A
NR3C1
7358224
chr4 3488754 rs568022218 C T
MAX MNT MYC REST TFE3 USF1 USF2
7358225
chr4 3488755 rs7681258 G A
MAX MNT MYC REST TFE3 USF1 USF2
7358226
chr4 3488771 rs148068893 C T
SP1 TFAP2A TFAP2B TFAP2C
7358227
chr4 3488777 rs564913937 CA C no 7358228
Genes possibly regulated by vista43966[chr4:3488499-3488826]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 55115
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 76534
chr4 3508103 3534286 - LRPAP1 ENSG00000163956.6 3534286 0.76 1.0 4486 54540
chr4 3511523 3511678 - AL590235.1 ENSG00000268781.1 3511678 0.0 1.0 4487 77148
chr4 3578596 3592438 + LINC00955 ENSG00000216560.4 3578596 1.0 1.0 4488 10230
Expression level of Genes
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miRNAs possibly regulated by vista43966[chr4:3488499-3488826]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results