EnhancerDB
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  3. vista43968[chr4:3493312-3493795]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43968[chr4:3493312-3493795]
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Tissue distribution of vista43968
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Transcription factor that possibly regulate vista43968[chr4:3493312-3493795]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3493314 3493329 HNF4A JASPAR yes 49193312
chr4 3493315 3493329 NR2F1 JASPAR yes 49193313
chr4 3493315 3493330 HNF4G JASPAR yes 49193314
chr4 3493318 3493339 REST JASPAR yes 49193315
chr4 3493328 3493339 NRL JASPAR yes 49193316
chr4 3493332 3493347 STAT1 JASPAR yes 49193317
chr4 3493339 3493359 ESR1 JASPAR yes 49193318
chr4 3493352 3493361 THAP1 JASPAR yes 49193319
chr4 3493372 3493383 FLI1 JASPAR yes 49193320
chr4 3493390 3493405 RFX5 JASPAR yes 49193321
chr4 3493394 3493406 INSM1 JASPAR yes 49193322
chr4 3493422 3493437 STAT2 JASPAR yes 49193323
chr4 3493461 3493470 ZEB1 JASPAR yes 49193324
chr4 3493474 3493489 TFAP2C JASPAR yes 49193325
chr4 3493478 3493498 PPARG JASPAR yes 49193326
chr4 3493496 3493506 NHLH1 JASPAR yes 49193327
chr4 3493518 3493533 RFX5 JASPAR yes 49193328
chr4 3493531 3493536 TFAP2A TRANSFAC yes 49193329
chr4 3493531 3493537 MZF1 JASPAR yes 49193330
chr4 3493533 3493554 ZNF263 JASPAR yes 49193331
chr4 3493536 3493557 ZNF263 JASPAR yes 49193332
chr4 3493546 3493556 SP1 JASPAR yes 49193333
chr4 3493547 3493559 INSM1 JASPAR yes 49193334
chr4 3493552 3493573 ZNF263 JASPAR yes 49193335
chr4 3493570 3493575 SP1 TRANSFAC yes 49193336
chr4 3493605 3493620 HNF4A JASPAR yes 49193337
chr4 3493644 3493648 H4TF2 TRANSFAC yes 49193338
chr4 3493654 3493669 HNF4A JASPAR yes 49193339
chr4 3493655 3493670 HNF4G JASPAR yes 49193340
chr4 3493673 3493692 CTCF JASPAR yes 49193341
chr4 3493675 3493686 EBF1 JASPAR yes 49193342
chr4 3493676 3493689 TFAP2A JASPAR yes 49193343
chr4 3493676 3493689 TFAP2B JASPAR yes 49193344
chr4 3493676 3493689 TFAP2C JASPAR yes 49193345
chr4 3493677 3493691 PLAG1 JASPAR yes 49193346
chr4 3493684 3493688 LFA1 TRANSFAC yes 49193347
chr4 3493702 3493706 ESR1 TRANSFAC yes 49193348
chr4 3493707 3493717 MZF1 JASPAR yes 49193349
chr4 3493707 3493728 ZNF263 JASPAR yes 49193350
chr4 3493708 3493729 ZNF263 JASPAR yes 49193351
chr4 3493710 3493716 SP1 TRANSFAC yes 49193352
chr4 3493718 3493727 SP1 TRANSFAC yes 49193353
chr4 3493721 3493727 NFE2 TRANSFAC yes 49193354
chr4 3493724 3493735 EBF1 JASPAR yes 49193355
chr4 3493729 3493739 SP1 JASPAR yes 49193356
chr4 3493730 3493737 CEBPA TRANSFAC yes 49193357
chr4 3493751 3493769 IRF2 JASPAR yes 49193358
chr4 3493763 3493771 EHF JASPAR yes 49193359
chr4 3493765 3493777 INSM1 JASPAR yes 49193360
chr4 3493769 3493783 JUN JASPAR yes 49193361
chr4 3493772 3493783 FOSL2 JASPAR yes 49193362
chr4 3493772 3493783 JUNB JASPAR yes 49193363
chr4 3493773 3493784 FOS JASPAR yes 49193364
chr4 3493773 3493784 FOSL1 JASPAR yes 49193365
chr4 3493773 3493784 JUND JASPAR yes 49193366
chr4 3493773 3493784 NFE2 JASPAR yes 49193367
chr4 3493774 3493781 JUN TRANSFAC yes 49193368
chr4 3493774 3493783 JDP2 JASPAR yes 49193369
chr4 3493774 3493785 FOSL2 JASPAR yes 49193370
chr4 3493774 3493785 JUNB JASPAR yes 49193371
chr4 3493774 3493788 JUN JASPAR yes 49193372
chr4 3493779 3493791 NHLH1 JASPAR yes 49193373
chr4 3493780 3493790 MSC JASPAR yes 49193374
chr4 3493780 3493790 NHLH1 JASPAR yes 49193375
chr4 3493780 3493790 TFAP4 JASPAR yes 49193376
SNP sites on vista43968[chr4:3493312-3493795]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3493322 rs376255000 C G
HNF4A HNF4G NR2F1 REST
7358292
chr4 3493345 rs2858019 A G
ESR1 STAT1
7358293
chr4 3493404 rs528746772 G A
INSM1 RFX5
7358294
chr4 3493432 rs147658204 C T
STAT2
7358295
chr4 3493506 rs58465243 C T
NHLH1
7358296
chr4 3493542 rs2699417 T A,G
ZNF263
7358297
chr4 3493576 rs142664966 C T no 7358298
chr4 3493588 rs115743933 C T no 7358299
chr4 3493593 rs369543733 G C no 7358300
chr4 3493623 rs75029597 G A no 7358301
chr4 3493649 rs150200711 C T no 7358302
chr4 3493668 rs138801660 A G
HNF4A HNF4G
7358303
chr4 3493713 rs550997236 C T
MZF1 SP1 ZNF263
7358304
chr4 3493743 rs60009044 C A no 7358305
chr4 3493793 rs149388066 C A no 7358306
Genes possibly regulated by vista43968[chr4:3493312-3493795]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3443614 3451211 + HGFAC ENSG00000109758.4 3443614 1.0 0.99 4484 50302
chr4 3465033 3503200 + DOK7 ENSG00000175920.11 3465033 0.93 0.99 4485 71721
chr4 3508103 3534286 - LRPAP1 ENSG00000163956.6 3534286 0.76 1.0 4486 59509
chr4 3511523 3511678 - AL590235.1 ENSG00000268781.1 3511678 0.0 1.0 4487 82117
chr4 3578596 3592438 + LINC00955 ENSG00000216560.4 3578596 1.0 1.0 4488 15199
Expression level of Genes
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miRNAs possibly regulated by vista43968[chr4:3493312-3493795]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results