EnhancerDB
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  3. vista43973[chr4:3829713-3829948]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43973[chr4:3829713-3829948]
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Tissue distribution of vista43973
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Transcription factor that possibly regulate vista43973[chr4:3829713-3829948]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3829701 3829715 TLX1 JASPAR yes 49193534
chr4 3829701 3829715 TLX1 JASPAR yes 87925028
chr4 3829711 3829722 EBF1 JASPAR yes 49193535
chr4 3829711 3829722 EBF1 JASPAR yes 87925030
chr4 3829718 3829724 MAZ TRANSFAC yes 49193536
chr4 3829718 3829724 MAZ TRANSFAC yes 87925031
chr4 3829744 3829749 ETS2 TRANSFAC yes 49193537
chr4 3829744 3829749 ETS2 TRANSFAC yes 87925032
chr4 3829751 3829765 TLX1 JASPAR yes 49193538
chr4 3829751 3829765 TLX1 JASPAR yes 87925033
chr4 3829803 3829816 NR2F1 JASPAR yes 49193539
chr4 3829803 3829816 NR2F1 JASPAR yes 87925034
chr4 3829817 3829832 HSF1 JASPAR yes 49193540
chr4 3829817 3829832 HSF1 JASPAR yes 87925035
chr4 3829818 3829831 HSF2 JASPAR yes 49193541
chr4 3829818 3829831 HSF2 JASPAR yes 87925036
chr4 3829823 3829836 HSF2 JASPAR yes 49193542
chr4 3829823 3829836 HSF2 JASPAR yes 87925037
chr4 3829836 3829850 MTF1 JASPAR yes 49193543
chr4 3829836 3829850 MTF1 JASPAR yes 87925038
chr4 3829840 3829855 HNF4G JASPAR yes 49193544
chr4 3829840 3829855 NR2C2 JASPAR yes 49193545
chr4 3829840 3829855 HNF4G JASPAR yes 87925039
chr4 3829840 3829855 NR2C2 JASPAR yes 87925040
chr4 3829841 3829855 RXRB JASPAR yes 49193546
chr4 3829841 3829855 RXRG JASPAR yes 49193547
chr4 3829841 3829855 RXRB JASPAR yes 87925041
chr4 3829841 3829855 RXRG JASPAR yes 87925042
chr4 3829841 3829856 HNF4A JASPAR yes 49193548
chr4 3829841 3829856 HNF4A JASPAR yes 87925043
chr4 3829905 3829909 LFA1 TRANSFAC yes 49193549
chr4 3829905 3829909 LFA1 TRANSFAC yes 87925044
chr4 3829929 3829944 HNF4A JASPAR yes 49193550
chr4 3829929 3829944 HNF4A JASPAR yes 87925045
chr4 3829930 3829945 HNF4G JASPAR yes 49193551
chr4 3829930 3829945 HNF4G JASPAR yes 87925046
chr4 3829934 3829953 CTCF JASPAR yes 49193552
chr4 3829934 3829953 CTCF JASPAR yes 87925047
chr4 3829936 3829942 NFE2 TRANSFAC yes 49193553
chr4 3829936 3829942 NFE2 TRANSFAC yes 87925048
chr4 3829937 3829949 INSM1 JASPAR yes 49193554
chr4 3829937 3829949 INSM1 JASPAR yes 87925049
chr4 3829948 3829967 CTCF JASPAR yes 49193555
chr4 3829948 3829967 CTCF JASPAR yes 87925050
SNP sites on vista43973[chr4:3829713-3829948]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3829799 rs556416186 C T no 7360919
chr4 3829807 rs73082738 T C
NR2F1
7360920
chr4 3829812 rs535554080 C A
NR2F1
7360921
chr4 3829842 rs73082740 G C
HNF4A HNF4G MTF1 NR2C2 RXRB RXRG
7360922
chr4 3829864 rs73082742 G A no 7360923
chr4 3829872 rs144328900 C T no 7360924
chr4 3829948 rs73082745 A G
CTCF INSM1
7360925
Genes possibly regulated by vista43973[chr4:3829713-3829948]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 3768075 3770251 + ADRA2C ENSG00000184160.6 3768075 0.93 1.0 4489 38362
Expression level of Genes
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miRNAs possibly regulated by vista43973[chr4:3829713-3829948]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results