EnhancerDB
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  3. vista43976[chr4:3931557-3931999]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43976[chr4:3931557-3931999]
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Tissue distribution of vista43976
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Transcription factor that possibly regulate vista43976[chr4:3931557-3931999]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 3931590 3931596 ETS1 JASPAR yes 49193757
chr4 3931590 3931596 SPI1 JASPAR yes 49193758
chr4 3931590 3931596 ETS1 JASPAR yes 87930772
chr4 3931590 3931596 SPI1 JASPAR yes 87930773
chr4 3931629 3931632 MYB TRANSFAC yes 49193759
chr4 3931629 3931632 MYB TRANSFAC yes 87930774
chr4 3931638 3931650 TEAD1 JASPAR yes 49193760
chr4 3931638 3931650 TEAD1 JASPAR yes 87930775
chr4 3931639 3931649 NFATC3 JASPAR yes 49193761
chr4 3931639 3931649 NFATC3 JASPAR yes 87930776
chr4 3931639 3931656 RXRA JASPAR yes 49193762
chr4 3931639 3931656 RXRA JASPAR yes 87930777
chr4 3931662 3931676 ONECUT1 JASPAR yes 49193763
chr4 3931662 3931676 ONECUT2 JASPAR yes 49193764
chr4 3931662 3931676 ONECUT3 JASPAR yes 49193765
chr4 3931662 3931676 ONECUT1 JASPAR yes 87930778
chr4 3931662 3931676 ONECUT2 JASPAR yes 87930779
chr4 3931662 3931676 ONECUT3 JASPAR yes 87930780
chr4 3931665 3931675 CUX1 JASPAR yes 49193766
chr4 3931665 3931675 CUX2 JASPAR yes 49193767
chr4 3931665 3931675 CUX1 JASPAR yes 87930781
chr4 3931665 3931675 CUX2 JASPAR yes 87930782
chr4 3931675 3931686 NFKB1 JASPAR yes 49193768
chr4 3931675 3931686 NFKB1 JASPAR yes 87930783
chr4 3931681 3931687 MZF1 JASPAR yes 49193769
chr4 3931681 3931687 MZF1 JASPAR yes 87930784
chr4 3931692 3931696 YY1 TRANSFAC yes 49193770
chr4 3931692 3931696 YY1 TRANSFAC yes 87930785
chr4 3931701 3931721 TP53 JASPAR yes 49193771
chr4 3931701 3931721 TP53 JASPAR yes 87930786
chr4 3931713 3931727 STAT1 JASPAR yes 49193772
chr4 3931713 3931727 STAT1 JASPAR yes 87930787
chr4 3931731 3931734 MYB TRANSFAC yes 49193773
chr4 3931731 3931734 MYB TRANSFAC yes 87930788
chr4 3931777 3931783 MZF1 JASPAR yes 49193774
chr4 3931777 3931783 MZF1 JASPAR yes 87930789
chr4 3931788 3931797 NFIX JASPAR yes 49193775
chr4 3931788 3931797 NFIX JASPAR yes 87930790
chr4 3931788 3931798 NFIA JASPAR yes 49193776
chr4 3931788 3931798 NFIA JASPAR yes 87930791
chr4 3931789 3931798 HIC2 JASPAR yes 49193777
chr4 3931789 3931798 HIC2 JASPAR yes 87930792
chr4 3931790 3931796 NFIC JASPAR yes 49193778
chr4 3931790 3931796 NFIC JASPAR yes 87930793
chr4 3931831 3931836 GATA2 JASPAR yes 49193779
chr4 3931831 3931836 GATA2 JASPAR yes 87930794
chr4 3931833 3931839 MZF1 JASPAR yes 49193780
chr4 3931833 3931839 MZF1 JASPAR yes 87930795
chr4 3931834 3931843 ZEB1 JASPAR yes 49193781
chr4 3931834 3931843 ZEB1 JASPAR yes 87930796
chr4 3931835 3931845 TCF4 JASPAR yes 49193782
chr4 3931835 3931845 TCF4 JASPAR yes 87930797
chr4 3931836 3931845 SNAI2 JASPAR yes 49193783
chr4 3931836 3931845 SNAI2 JASPAR yes 87930798
chr4 3931837 3931842 USF2 TRANSFAC yes 49193784
chr4 3931837 3931842 USF2 TRANSFAC yes 87930799
chr4 3931846 3931864 SRF JASPAR yes 49193785
chr4 3931846 3931864 SRF JASPAR yes 87930800
chr4 3931848 3931864 SRF JASPAR yes 49193786
chr4 3931848 3931864 SRF JASPAR yes 87930801
chr4 3931848 3931866 SRF JASPAR yes 49193787
chr4 3931848 3931866 SRF JASPAR yes 87930802
chr4 3931849 3931861 SRF JASPAR yes 49193788
chr4 3931849 3931861 SRF JASPAR yes 87930803
chr4 3931851 3931863 SRF JASPAR yes 49193789
chr4 3931851 3931863 SRF JASPAR yes 87930804
chr4 3931872 3931875 MYB TRANSFAC yes 49193790
chr4 3931872 3931875 MYB TRANSFAC yes 87930805
chr4 3931872 3931883 PHOX2A JASPAR yes 49193791
chr4 3931872 3931883 PROP1 JASPAR yes 49193792
chr4 3931872 3931883 PHOX2A JASPAR yes 87930806
chr4 3931872 3931883 PROP1 JASPAR yes 87930807
chr4 3931915 3931932 RXRA JASPAR yes 49193793
chr4 3931915 3931932 RXRA JASPAR yes 87930808
chr4 3931922 3931935 NR2F1 JASPAR yes 49193794
chr4 3931922 3931935 NR2F1 JASPAR yes 87930809
chr4 3931924 3931935 ESRRA JASPAR yes 49193795
chr4 3931924 3931935 ESRRA JASPAR yes 87930810
chr4 3931925 3931933 NR4A2 JASPAR yes 49193796
chr4 3931925 3931933 NR4A2 JASPAR yes 87930811
chr4 3931926 3931936 RORA JASPAR yes 49193797
chr4 3931926 3931936 RORA JASPAR yes 87930812
chr4 3931926 3931940 RXRB JASPAR yes 49193798
chr4 3931926 3931940 RXRG JASPAR yes 49193799
chr4 3931926 3931940 RXRB JASPAR yes 87930813
chr4 3931926 3931940 RXRG JASPAR yes 87930814
chr4 3931926 3931941 NR2C2 JASPAR yes 49193800
chr4 3931926 3931941 NR2C2 JASPAR yes 87930815
chr4 3931938 3931952 TCF7L2 JASPAR yes 49193801
chr4 3931938 3931952 TCF7L2 JASPAR yes 87930816
chr4 3931942 3931948 TCF1 TRANSFAC yes 49193802
chr4 3931942 3931948 TCF1 TRANSFAC yes 87930817
chr4 3931942 3931949 TCF4 TRANSFAC yes 49193803
chr4 3931942 3931949 TCF4 TRANSFAC yes 87930818
chr4 3931948 3931969 ZNF263 JASPAR yes 49193804
chr4 3931948 3931969 ZNF263 JASPAR yes 87930819
chr4 3931960 3931981 ZNF263 JASPAR yes 49193805
chr4 3931960 3931981 ZNF263 JASPAR yes 87930820
chr4 3931970 3931975 GATA1 TRANSFAC yes 49193806
chr4 3931970 3931975 GATA1 TRANSFAC yes 87930821
chr4 3931975 3931981 MZF1 JASPAR yes 49193807
chr4 3931975 3931981 MZF1 JASPAR yes 87930822
chr4 3931982 3931991 PITX3 JASPAR yes 49193808
chr4 3931982 3931991 PITX3 JASPAR yes 87930823
chr4 3931982 3931992 GSC2 JASPAR yes 49193809
chr4 3931982 3931992 GSC JASPAR yes 49193810
chr4 3931982 3931992 GSC2 JASPAR yes 87930824
chr4 3931982 3931992 GSC JASPAR yes 87930825
chr4 3931983 3931991 OTX1 JASPAR yes 49193811
chr4 3931983 3931991 OTX2 JASPAR yes 49193812
chr4 3931983 3931991 OTX1 JASPAR yes 87930826
chr4 3931983 3931991 OTX2 JASPAR yes 87930827
SNP sites on vista43976[chr4:3931557-3931999]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 3931586 rs572665376 T A no 7362151
chr4 3931616 rs139531155 C T no 7362152
chr4 3931654 rs543567883 T C
RXRA
7362153
chr4 3931683 rs149714811 C A
MZF1 NFKB1
7362154
chr4 3931729 rs570337684 C T no 7362155
chr4 3931751 rs28778402 C A,T no 7362156
chr4 3931752 rs28782510 G A no 7362157
chr4 3931758 rs58968923 G A no 7362158
chr4 3931768 rs146519120 C T no 7362159
chr4 3931785 rs140510785 G C no 7362160
chr4 3931789 rs201081611 T C,G
HIC2 NFIA NFIX
7362161
chr4 3931798 rs578224225 T A
HIC2 NFIA
7362162
chr4 3931799 rs28827887 T C no 7362163
chr4 3931800 rs563679846 A G no 7362164
chr4 3931801 rs59719628 G A,C no 7362165
chr4 3931805 rs34888186 A G no 7362166
chr4 3931806 rs28794825 A T no 7362167
chr4 3931835 rs371904747 C G
GATA2 MZF1 TCF4 ZEB1
7362168
chr4 3931863 rs62288966 C T
SRF
7362169
chr4 3931864 rs187028494 G A
SRF
7362170
chr4 3931866 rs62288967 A G
SRF
7362171
chr4 3931882 rs138862397 T G
PHOX2A PROP1
7362172
chr4 3931931 rs192844497 C G
ESRRA NR2C2 NR2F1 NR4A2 RORA RXRA RXRB RXRG
7362173
chr4 3931951 rs113650567 C T
TCF7L2 ZNF263
7362174
chr4 3931997 rs73205023 A G no 7362175
Genes possibly regulated by vista43976[chr4:3931557-3931999]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43976[chr4:3931557-3931999]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results