EnhancerDB
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  3. vista43978[chr4:4272259-4272533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43978[chr4:4272259-4272533]
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Tissue distribution of vista43978
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Transcription factor that possibly regulate vista43978[chr4:4272259-4272533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 4272259 4272274 FOXP1 JASPAR yes 49193841
chr4 4272260 4272266 TBP TRANSFAC yes 49193842
chr4 4272260 4272275 FOXP1 JASPAR yes 49193843
chr4 4272260 4272281 IRF1 JASPAR yes 49193844
chr4 4272261 4272276 FOXP1 JASPAR yes 49193845
chr4 4272264 4272279 STAT2 JASPAR yes 49193846
chr4 4272269 4272289 RREB1 JASPAR yes 49193847
chr4 4272272 4272287 RUNX2 JASPAR yes 49193848
chr4 4272273 4272283 RUNX3 JASPAR yes 49193849
chr4 4272273 4272293 RREB1 JASPAR yes 49193850
chr4 4272274 4272294 RREB1 JASPAR yes 49193851
chr4 4272277 4272297 RREB1 JASPAR yes 49193852
chr4 4272280 4272300 RREB1 JASPAR yes 49193853
chr4 4272284 4272304 RREB1 JASPAR yes 49193854
chr4 4272285 4272305 RREB1 JASPAR yes 49193855
chr4 4272287 4272302 RUNX2 JASPAR yes 49193856
chr4 4272288 4272308 RREB1 JASPAR yes 49193857
chr4 4272289 4272309 RREB1 JASPAR yes 49193858
chr4 4272290 4272310 RREB1 JASPAR yes 49193859
chr4 4272297 4272309 INSM1 JASPAR yes 49193860
chr4 4272307 4272322 MEF2C JASPAR yes 49193861
chr4 4272308 4272323 MEF2A JASPAR yes 49193862
chr4 4272309 4272321 MEF2D JASPAR yes 49193863
chr4 4272339 4272345 TBP TRANSFAC yes 49193864
chr4 4272356 4272360 YY1 TRANSFAC yes 49193865
chr4 4272375 4272389 GATA2 JASPAR yes 49193866
chr4 4272377 4272383 GATA3 JASPAR yes 49193867
chr4 4272413 4272417 YY1 TRANSFAC yes 49193868
chr4 4272413 4272424 FOSL1 JASPAR yes 49193869
chr4 4272413 4272424 JUND JASPAR yes 49193870
chr4 4272414 4272423 JDP2 JASPAR yes 49193871
chr4 4272414 4272425 FOSL2 JASPAR yes 49193872
chr4 4272414 4272425 JUNB JASPAR yes 49193873
chr4 4272417 4272427 EMX1 JASPAR yes 49193874
chr4 4272417 4272427 HOXB3 JASPAR yes 49193875
chr4 4272420 4272424 YY1 TRANSFAC yes 49193876
chr4 4272431 4272439 HOXA5 JASPAR yes 49193877
chr4 4272433 4272445 IRF1 JASPAR yes 49193878
chr4 4272439 4272454 RUNX2 JASPAR yes 49193879
chr4 4272440 4272449 RUNX2 JASPAR yes 49193880
chr4 4272440 4272450 RUNX3 JASPAR yes 49193881
chr4 4272440 4272451 RUNX1 JASPAR yes 49193882
chr4 4272456 4272467 RUNX1 JASPAR yes 49193883
chr4 4272467 4272471 NFE TRANSFAC yes 49193884
chr4 4272471 4272483 YY1 JASPAR yes 49193885
chr4 4272503 4272515 SRF JASPAR yes 49193886
SNP sites on vista43978[chr4:4272259-4272533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 4272410 rs560111112 A T no 7363943
chr4 4272464 rs552373505 A C
RUNX1
7363944
chr4 4272502 rs10937831 C T no 7363945
Genes possibly regulated by vista43978[chr4:4272259-4272533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 4190530 4228616 - OTOP1 ENSG00000163982.5 4228616 0.96 0.0 4490 56357
chr4 4237269 4249950 - TMEM128 ENSG00000132406.7 4249950 0.7 1.0 4491 77691
chr4 4269428 4291896 - LYAR ENSG00000145220.9 4291896 0.72 0.99 4492 80637
chr4 4291924 4323513 + ZBTB49 ENSG00000168826.11 4291924 0.6 1.0 4493 80609
chr4 4349867 4420785 + NSG1 ENSG00000168824.10 4349867 0.91 0.88 4494 22666
Expression level of Genes
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miRNAs possibly regulated by vista43978[chr4:4272259-4272533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results