EnhancerDB
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  3. vista43989[chr4:5039798-5040187]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43989[chr4:5039798-5040187]
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Tissue distribution of vista43989
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Transcription factor that possibly regulate vista43989[chr4:5039798-5040187]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 5039715 5040063 JUN UCSC Txn Factor no Conserved 108531906
chr4 5039741 5040291 EP300 UCSC Txn Factor no Conserved 108531907
chr4 5039748 5040215 FOSL2 UCSC Txn Factor no Conserved 108531908
chr4 5039749 5040259 TCF12 UCSC Txn Factor no Conserved 108531909
chr4 5039914 5040258 STAT3 UCSC Txn Factor no Conserved 108531910
chr4 5039953 5040279 CEBPB UCSC Txn Factor no Conserved 108531911
chr4 5039785 5039800 AR JASPAR yes 49194326
chr4 5039785 5039800 AR JASPAR yes 87985259
chr4 5039791 5039808 BCL6B JASPAR yes 49194327
chr4 5039791 5039808 BCL6B JASPAR yes 87985260
chr4 5039792 5039807 STAT1 JASPAR yes 49194328
chr4 5039792 5039807 STAT1 JASPAR yes 87985261
chr4 5039794 5039805 STAT1 JASPAR yes 49194329
chr4 5039794 5039805 STAT3 JASPAR yes 49194330
chr4 5039794 5039805 STAT1 JASPAR yes 87985262
chr4 5039794 5039805 STAT3 JASPAR yes 87985263
chr4 5039800 5039818 NR3C1 JASPAR yes 49194331
chr4 5039800 5039818 NR3C1 JASPAR yes 87985264
chr4 5039807 5039820 ATF4 JASPAR yes 49194332
chr4 5039807 5039820 ATF4 JASPAR yes 87985265
chr4 5039810 5039821 DUX4 JASPAR yes 49194333
chr4 5039810 5039821 DUX4 JASPAR yes 87985266
chr4 5039812 5039822 TEAD4 JASPAR yes 49194334
chr4 5039812 5039822 TEAD4 JASPAR yes 87985267
chr4 5039816 5039830 IRF8 JASPAR yes 49194335
chr4 5039816 5039830 IRF8 JASPAR yes 87985268
chr4 5039825 5039835 NFATC3 JASPAR yes 49194336
chr4 5039825 5039835 NFATC3 JASPAR yes 87985269
chr4 5039827 5039834 NFATC2 JASPAR yes 49194337
chr4 5039827 5039834 NFATC2 JASPAR yes 87985270
chr4 5039828 5039848 TP53 JASPAR yes 49194338
chr4 5039828 5039848 TP53 JASPAR yes 87985271
chr4 5039829 5039847 MAFF JASPAR yes 49194339
chr4 5039829 5039847 MAFF JASPAR yes 87985272
chr4 5039831 5039846 MAFK JASPAR yes 49194340
chr4 5039831 5039846 MAFK JASPAR yes 87985273
chr4 5039831 5039849 TP53 JASPAR yes 49194341
chr4 5039831 5039849 TP53 JASPAR yes 87985274
chr4 5039832 5039847 TP53 JASPAR yes 49194342
chr4 5039832 5039847 TP53 JASPAR yes 87985275
chr4 5039832 5039852 TP53 JASPAR yes 49194343
chr4 5039832 5039852 TP53 JASPAR yes 87985276
chr4 5039840 5039855 JUND JASPAR yes 49194344
chr4 5039840 5039855 JUND JASPAR yes 87985277
chr4 5039841 5039854 JUN JASPAR yes 49194345
chr4 5039841 5039854 JUN JASPAR yes 87985278
chr4 5039842 5039856 ATF7 JASPAR yes 49194346
chr4 5039842 5039856 ATF7 JASPAR yes 87985279
chr4 5039843 5039855 JDP2 JASPAR yes 49194347
chr4 5039843 5039855 JDP2 JASPAR yes 87985280
chr4 5039843 5039858 JUND JASPAR yes 49194348
chr4 5039843 5039858 JUND JASPAR yes 87985281
chr4 5039844 5039857 JUN JASPAR yes 49194349
chr4 5039844 5039857 JUN JASPAR yes 87985282
chr4 5039845 5039853 CREB1 JASPAR yes 49194350
chr4 5039845 5039853 CREB1 JASPAR yes 87985283
chr4 5039845 5039862 RARA JASPAR yes 49194351
chr4 5039845 5039862 RARA JASPAR yes 87985284
chr4 5039871 5039882 FOS JASPAR yes 49194352
chr4 5039871 5039882 JUND JASPAR yes 49194353
chr4 5039871 5039882 NFE2 JASPAR yes 49194354
chr4 5039871 5039882 FOS JASPAR yes 87985285
chr4 5039871 5039882 JUND JASPAR yes 87985286
chr4 5039871 5039882 NFE2 JASPAR yes 87985287
chr4 5039872 5039880 JUND TRANSFAC yes 49194355
chr4 5039872 5039880 JUND TRANSFAC yes 87985288
chr4 5039872 5039881 JDP2 JASPAR yes 49194356
chr4 5039872 5039881 JDP2 JASPAR yes 87985289
chr4 5039872 5039883 FOSL2 JASPAR yes 49194357
chr4 5039872 5039883 JUNB JASPAR yes 49194358
chr4 5039872 5039883 FOSL2 JASPAR yes 87985290
chr4 5039872 5039883 JUNB JASPAR yes 87985291
chr4 5039872 5039886 JUN JASPAR yes 49194359
chr4 5039872 5039886 JUN JASPAR yes 87985292
chr4 5039873 5039879 JUN TRANSFAC yes 49194360
chr4 5039873 5039879 JUN TRANSFAC yes 87985293
chr4 5039880 5039886 MZF1 JASPAR yes 49194361
chr4 5039880 5039886 MZF1 JASPAR yes 87985294
chr4 5039882 5039891 CDX1 JASPAR yes 49194362
chr4 5039882 5039891 CDX1 JASPAR yes 87985295
chr4 5039882 5039892 HOXA13 JASPAR yes 49194363
chr4 5039882 5039892 HOXB13 JASPAR yes 49194364
chr4 5039882 5039892 HOXD13 JASPAR yes 49194365
chr4 5039882 5039892 HOXA13 JASPAR yes 87985296
chr4 5039882 5039892 HOXB13 JASPAR yes 87985297
chr4 5039882 5039892 HOXD13 JASPAR yes 87985298
chr4 5039900 5039906 NFIC JASPAR yes 49194366
chr4 5039900 5039906 NFIC JASPAR yes 87985299
chr4 5039901 5039911 ALX3 JASPAR yes 49194367
chr4 5039901 5039911 ESX1 JASPAR yes 49194368
chr4 5039901 5039911 GBX2 JASPAR yes 49194369
chr4 5039901 5039911 GSX1 JASPAR yes 49194370
chr4 5039901 5039911 GSX2 JASPAR yes 49194371
chr4 5039901 5039911 HESX1 JASPAR yes 49194372
chr4 5039901 5039911 LBX2 JASPAR yes 49194373
chr4 5039901 5039911 LHX2 JASPAR yes 49194374
chr4 5039901 5039911 MIXL1 JASPAR yes 49194375
chr4 5039901 5039911 MNX1 JASPAR yes 49194376
chr4 5039901 5039911 RAX JASPAR yes 49194377
chr4 5039901 5039911 ALX3 JASPAR yes 87985300
chr4 5039901 5039911 ESX1 JASPAR yes 87985301
chr4 5039901 5039911 GBX2 JASPAR yes 87985302
chr4 5039901 5039911 GSX1 JASPAR yes 87985303
chr4 5039901 5039911 GSX2 JASPAR yes 87985304
chr4 5039901 5039911 HESX1 JASPAR yes 87985305
chr4 5039901 5039911 LBX2 JASPAR yes 87985306
chr4 5039901 5039911 LHX2 JASPAR yes 87985307
chr4 5039901 5039911 MIXL1 JASPAR yes 87985308
chr4 5039901 5039911 MNX1 JASPAR yes 87985309
chr4 5039901 5039911 RAX JASPAR yes 87985310
chr4 5039901 5039912 HOXA10 JASPAR yes 49194378
chr4 5039901 5039912 HOXA10 JASPAR yes 87985311
chr4 5039902 5039906 H1TF2 TRANSFAC yes 49194379
chr4 5039902 5039906 NFE TRANSFAC yes 49194380
chr4 5039902 5039906 SRF TRANSFAC yes 49194381
chr4 5039902 5039906 H1TF2 TRANSFAC yes 87985312
chr4 5039902 5039906 NFE TRANSFAC yes 87985313
chr4 5039902 5039906 SRF TRANSFAC yes 87985314
chr4 5039902 5039910 BARX1 JASPAR yes 49194382
chr4 5039902 5039910 BSX JASPAR yes 49194383
chr4 5039902 5039910 DLX6 JASPAR yes 49194384
chr4 5039902 5039910 ISX JASPAR yes 49194385
chr4 5039902 5039910 LBX1 JASPAR yes 49194386
chr4 5039902 5039910 LHX9 JASPAR yes 49194387
chr4 5039902 5039910 MSX1 JASPAR yes 49194388
chr4 5039902 5039910 MSX2 JASPAR yes 49194389
chr4 5039902 5039910 NKX6-2 JASPAR yes 49194390
chr4 5039902 5039910 PRRX1 JASPAR yes 49194391
chr4 5039902 5039910 RAX2 JASPAR yes 49194392
chr4 5039902 5039910 SHOX JASPAR yes 49194393
chr4 5039902 5039910 UNCX JASPAR yes 49194394
chr4 5039902 5039910 BARX1 JASPAR yes 87985315
chr4 5039902 5039910 BSX JASPAR yes 87985316
chr4 5039902 5039910 DLX6 JASPAR yes 87985317
chr4 5039902 5039910 ISX JASPAR yes 87985318
chr4 5039902 5039910 LBX1 JASPAR yes 87985319
chr4 5039902 5039910 LHX9 JASPAR yes 87985320
chr4 5039902 5039910 MSX1 JASPAR yes 87985321
chr4 5039902 5039910 MSX2 JASPAR yes 87985322
chr4 5039902 5039910 NKX6-2 JASPAR yes 87985323
chr4 5039902 5039910 PRRX1 JASPAR yes 87985324
chr4 5039902 5039910 RAX2 JASPAR yes 87985325
chr4 5039902 5039910 SHOX JASPAR yes 87985326
chr4 5039902 5039910 UNCX JASPAR yes 87985327
chr4 5039902 5039912 HOXA13 JASPAR yes 49194395
chr4 5039902 5039912 HOXB13 JASPAR yes 49194396
chr4 5039902 5039912 HOXD13 JASPAR yes 49194397
chr4 5039902 5039912 HOXA13 JASPAR yes 87985328
chr4 5039902 5039912 HOXB13 JASPAR yes 87985329
chr4 5039902 5039912 HOXD13 JASPAR yes 87985330
chr4 5039915 5039925 TFAP4 JASPAR yes 49194398
chr4 5039915 5039925 TFAP4 JASPAR yes 87985331
chr4 5039932 5039944 IRF1 JASPAR yes 49194399
chr4 5039932 5039944 IRF1 JASPAR yes 87985332
chr4 5039932 5039946 IRF7 JASPAR yes 49194400
chr4 5039932 5039946 IRF7 JASPAR yes 87985333
chr4 5039937 5039941 YY1 TRANSFAC yes 49194401
chr4 5039937 5039941 YY1 TRANSFAC yes 87985334
chr4 5039938 5039953 MAFK JASPAR yes 49194402
chr4 5039938 5039953 MAFK JASPAR yes 87985335
chr4 5039947 5039957 MYF6 JASPAR yes 49194403
chr4 5039947 5039957 NEUROG2 JASPAR yes 49194404
chr4 5039947 5039957 MYF6 JASPAR yes 87985336
chr4 5039947 5039957 NEUROG2 JASPAR yes 87985337
chr4 5039949 5039953 YY1 TRANSFAC yes 49194405
chr4 5039949 5039953 YY1 TRANSFAC yes 87985338
chr4 5039975 5039994 PAX5 JASPAR yes 49194406
chr4 5039975 5039994 PAX5 JASPAR yes 87985339
chr4 5039981 5039986 ETS2 TRANSFAC yes 49194407
chr4 5039981 5039986 ETS2 TRANSFAC yes 87985340
chr4 5039981 5039989 EHF JASPAR yes 49194408
chr4 5039981 5039989 EHF JASPAR yes 87985341
chr4 5040003 5040014 ESRRA JASPAR yes 49194409
chr4 5040003 5040014 ESRRB JASPAR yes 49194410
chr4 5040003 5040014 ESRRA JASPAR yes 87985342
chr4 5040003 5040014 ESRRB JASPAR yes 87985343
chr4 5040005 5040022 RARA JASPAR yes 49194411
chr4 5040005 5040022 RARA JASPAR yes 87985344
chr4 5040009 5040016 E2F1 TRANSFAC yes 49194412
chr4 5040009 5040016 E2F1 TRANSFAC yes 87985345
chr4 5040028 5040032 YY1 TRANSFAC yes 49194413
chr4 5040028 5040032 YY1 TRANSFAC yes 87985346
chr4 5040029 5040041 FOXI1 JASPAR yes 49194414
chr4 5040029 5040041 FOXI1 JASPAR yes 87985347
chr4 5040029 5040044 FOXP1 JASPAR yes 49194415
chr4 5040029 5040044 FOXP1 JASPAR yes 87985348
chr4 5040030 5040042 FOXC2 JASPAR yes 49194416
chr4 5040030 5040042 FOXC2 JASPAR yes 87985349
chr4 5040032 5040040 FOXO3 JASPAR yes 49194417
chr4 5040032 5040040 FOXO3 JASPAR yes 87985350
chr4 5040041 5040051 GSC JASPAR yes 49194418
chr4 5040041 5040051 GSC JASPAR yes 87985351
chr4 5040042 5040050 RHOXF1 JASPAR yes 49194419
chr4 5040042 5040050 RHOXF1 JASPAR yes 87985352
chr4 5040042 5040051 PITX3 JASPAR yes 49194420
chr4 5040042 5040051 PITX3 JASPAR yes 87985353
chr4 5040062 5040067 ETS2 TRANSFAC yes 49194421
chr4 5040062 5040067 ETS2 TRANSFAC yes 87985354
chr4 5040063 5040073 NFKB1 JASPAR yes 49194422
chr4 5040063 5040073 NFKB1 JASPAR yes 87985355
chr4 5040064 5040074 RELA JASPAR yes 49194423
chr4 5040064 5040074 REL JASPAR yes 49194424
chr4 5040064 5040074 RELA JASPAR yes 87985356
chr4 5040064 5040074 REL JASPAR yes 87985357
chr4 5040068 5040074 MZF1 JASPAR yes 49194425
chr4 5040068 5040074 MZF1 JASPAR yes 87985358
chr4 5040086 5040103 PAX1 JASPAR yes 49194426
chr4 5040086 5040103 PAX9 JASPAR yes 49194427
chr4 5040086 5040103 PAX1 JASPAR yes 87985359
chr4 5040086 5040103 PAX9 JASPAR yes 87985360
chr4 5040093 5040104 CEBPB JASPAR yes 49194428
chr4 5040093 5040104 CEBPB JASPAR yes 87985361
chr4 5040099 5040107 NKX6-1 JASPAR yes 49194429
chr4 5040099 5040107 NKX6-1 JASPAR yes 87985362
chr4 5040107 5040118 DMRT3 JASPAR yes 49194430
chr4 5040107 5040118 DMRT3 JASPAR yes 87985363
chr4 5040109 5040114 GATA2 JASPAR yes 49194431
chr4 5040109 5040114 GATA2 JASPAR yes 87985364
chr4 5040115 5040126 STAT1 JASPAR yes 49194432
chr4 5040115 5040126 STAT3 JASPAR yes 49194433
chr4 5040115 5040126 STAT1 JASPAR yes 87985365
chr4 5040115 5040126 STAT3 JASPAR yes 87985366
chr4 5040130 5040141 CEBPA JASPAR yes 49194434
chr4 5040130 5040141 CEBPA JASPAR yes 87985367
chr4 5040131 5040141 CEBPB JASPAR yes 49194435
chr4 5040131 5040141 CEBPE JASPAR yes 49194436
chr4 5040131 5040141 CEBPG JASPAR yes 49194437
chr4 5040131 5040141 CEBPB JASPAR yes 87985368
chr4 5040131 5040141 CEBPE JASPAR yes 87985369
chr4 5040131 5040141 CEBPG JASPAR yes 87985370
chr4 5040131 5040142 CEBPB JASPAR yes 49194438
chr4 5040131 5040142 CEBPB JASPAR yes 87985371
chr4 5040134 5040138 LFA1 TRANSFAC yes 49194439
chr4 5040134 5040138 LFA1 TRANSFAC yes 87985372
chr4 5040148 5040159 FOXA1 JASPAR yes 49194440
chr4 5040148 5040159 FOXA1 JASPAR yes 87985373
chr4 5040148 5040163 FOXA1 JASPAR yes 49194441
chr4 5040148 5040163 FOXA1 JASPAR yes 87985374
chr4 5040149 5040160 FOXC1 JASPAR yes 49194442
chr4 5040149 5040160 FOXC1 JASPAR yes 87985375
chr4 5040149 5040161 FOXC2 JASPAR yes 49194443
chr4 5040149 5040161 FOXC2 JASPAR yes 87985376
chr4 5040180 5040187 NKX3-1 JASPAR yes 49194444
chr4 5040180 5040187 NKX3-1 JASPAR yes 87985377
chr4 5040185 5040206 REST JASPAR yes 49194445
chr4 5040185 5040206 REST JASPAR yes 87985378
SNP sites on vista43989[chr4:5039798-5040187]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 5039815 rs143716781 G A
ATF4 DUX4 EP300 FOSL2 JUN NR3C1 TCF12 TEAD4
7369534
chr4 5039970 rs185163648 C G,T
CEBPB EP300 FOSL2 JUN STAT3 TCF12
7369535
chr4 5040172 rs6819185 T G
CEBPB EP300 FOSL2 STAT3 TCF12
7369536
Genes possibly regulated by vista43989[chr4:5039798-5040187]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 5016313 5021199 - CYTL1 ENSG00000170891.6 5021199 0.87 1.0 4497 81401
chr4 5053169 5502725 + STK32B ENSG00000152953.8 5053169 0.87 1.0 4498 87018
Expression level of Genes
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miRNAs possibly regulated by vista43989[chr4:5039798-5040187]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results