EnhancerDB
  1. Home
  2. Enhancers
  3. vista43998[chr4:6022258-6022662]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43998[chr4:6022258-6022662]
Back to top
Tissue distribution of vista43998
Back to top
Transcription factor that possibly regulate vista43998[chr4:6022258-6022662]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6022268 6022278 ID4 JASPAR yes 49194716
chr4 6022268 6022278 TCF3 JASPAR yes 49194717
chr4 6022268 6022278 TCF4 JASPAR yes 49194718
chr4 6022270 6022275 USF2 TRANSFAC yes 49194719
chr4 6022297 6022301 NFE TRANSFAC yes 49194720
chr4 6022306 6022318 INSM1 JASPAR yes 49194721
chr4 6022313 6022317 LFA1 TRANSFAC yes 49194722
chr4 6022327 6022331 NFE TRANSFAC yes 49194723
chr4 6022328 6022341 ZBTB18 JASPAR yes 49194724
chr4 6022344 6022357 EOMES JASPAR yes 49194725
chr4 6022346 6022356 TBR1 JASPAR yes 49194726
chr4 6022346 6022357 TBX2 JASPAR yes 49194727
chr4 6022346 6022366 TBX19 JASPAR yes 49194728
chr4 6022347 6022357 TBX21 JASPAR yes 49194729
chr4 6022379 6022390 NFE2L2 JASPAR yes 49194730
chr4 6022385 6022397 INSM1 JASPAR yes 49194731
chr4 6022390 6022411 IRF1 JASPAR yes 49194732
chr4 6022392 6022407 IRF9 JASPAR yes 49194733
chr4 6022393 6022407 IRF7 JASPAR yes 49194734
chr4 6022394 6022408 STAT1 JASPAR yes 49194735
chr4 6022394 6022409 PRDM1 JASPAR yes 49194736
chr4 6022394 6022409 STAT2 JASPAR yes 49194737
chr4 6022394 6022412 IRF2 JASPAR yes 49194738
chr4 6022395 6022407 IRF1 JASPAR yes 49194739
chr4 6022398 6022413 IRF9 JASPAR yes 49194740
chr4 6022399 6022413 IRF8 JASPAR yes 49194741
chr4 6022401 6022413 IRF1 JASPAR yes 49194742
chr4 6022406 6022418 PKNOX1 JASPAR yes 49194743
chr4 6022406 6022418 PKNOX2 JASPAR yes 49194744
chr4 6022406 6022418 TGIF1 JASPAR yes 49194745
chr4 6022406 6022418 TGIF2 JASPAR yes 49194746
chr4 6022416 6022426 SP1 JASPAR yes 49194747
chr4 6022419 6022433 ZIC1 JASPAR yes 49194748
chr4 6022419 6022434 ZIC3 JASPAR yes 49194749
chr4 6022422 6022428 MZF1 JASPAR yes 49194750
chr4 6022433 6022444 BATF JASPAR yes 49194751
chr4 6022450 6022470 RREB1 JASPAR yes 49194752
chr4 6022451 6022471 RREB1 JASPAR yes 49194753
chr4 6022453 6022473 RREB1 JASPAR yes 49194754
chr4 6022454 6022459 SP1 TRANSFAC yes 49194755
chr4 6022456 6022476 RREB1 JASPAR yes 49194756
chr4 6022458 6022472 GLIS2 JASPAR yes 49194757
chr4 6022458 6022472 GLIS3 JASPAR yes 49194758
chr4 6022460 6022480 RREB1 JASPAR yes 49194759
chr4 6022461 6022466 SP1 TRANSFAC yes 49194760
chr4 6022462 6022472 ZNF740 JASPAR yes 49194761
chr4 6022464 6022474 SP1 JASPAR yes 49194762
chr4 6022478 6022482 H4TF2 TRANSFAC yes 49194763
chr4 6022496 6022501 MYC TRANSFAC yes 49194764
chr4 6022554 6022562 MEIS2 JASPAR yes 49194765
chr4 6022554 6022562 MEIS3 JASPAR yes 49194766
chr4 6022554 6022562 MEIS2 JASPAR yes 88021017
chr4 6022554 6022562 MEIS3 JASPAR yes 88021018
chr4 6022555 6022567 PKNOX2 JASPAR yes 49194767
chr4 6022555 6022567 TGIF1 JASPAR yes 49194768
chr4 6022555 6022567 PKNOX2 JASPAR yes 88021019
chr4 6022555 6022567 TGIF1 JASPAR yes 88021020
chr4 6022556 6022566 TFAP4 JASPAR yes 49194769
chr4 6022556 6022566 TFAP4 JASPAR yes 88021021
chr4 6022566 6022581 RFX5 JASPAR yes 49194770
chr4 6022566 6022581 RFX5 JASPAR yes 88021022
chr4 6022587 6022602 TFAP2A JASPAR yes 49194771
chr4 6022587 6022602 TFAP2C JASPAR yes 49194772
chr4 6022587 6022602 TFAP2A JASPAR yes 88021023
chr4 6022587 6022602 TFAP2C JASPAR yes 88021024
chr4 6022590 6022602 TFAP2A JASPAR yes 49194773
chr4 6022590 6022602 TFAP2B JASPAR yes 49194774
chr4 6022590 6022602 TFAP2A JASPAR yes 88021025
chr4 6022590 6022602 TFAP2B JASPAR yes 88021026
chr4 6022590 6022604 PLAG1 JASPAR yes 49194775
chr4 6022590 6022604 PLAG1 JASPAR yes 88021027
chr4 6022592 6022601 TFAP2A JASPAR yes 49194776
chr4 6022592 6022601 TFAP2A JASPAR yes 88021028
chr4 6022607 6022617 SP1 JASPAR yes 49194777
chr4 6022607 6022617 SP1 JASPAR yes 88021029
chr4 6022627 6022635 EHF JASPAR yes 49194778
chr4 6022627 6022635 EHF JASPAR yes 88021030
chr4 6022629 6022634 ETS2 TRANSFAC yes 49194779
chr4 6022629 6022634 ETS2 TRANSFAC yes 88021031
chr4 6022641 6022653 TFAP2A JASPAR yes 49194780
chr4 6022641 6022653 TFAP2B JASPAR yes 49194781
chr4 6022641 6022653 TFAP2C JASPAR yes 49194782
chr4 6022641 6022653 TFAP2A JASPAR yes 88021032
chr4 6022641 6022653 TFAP2B JASPAR yes 88021033
chr4 6022641 6022653 TFAP2C JASPAR yes 88021034
chr4 6022641 6022656 TFAP2A JASPAR yes 49194783
chr4 6022641 6022656 TFAP2C JASPAR yes 49194784
chr4 6022641 6022656 TFAP2A JASPAR yes 88021035
chr4 6022641 6022656 TFAP2C JASPAR yes 88021036
chr4 6022647 6022655 SP1 TRANSFAC yes 49194785
chr4 6022647 6022655 SP1 TRANSFAC yes 88021037
chr4 6022649 6022655 MAZ TRANSFAC yes 49194786
chr4 6022649 6022655 MAZ TRANSFAC yes 88021038
chr4 6022653 6022657 LFA1 TRANSFAC yes 49194787
chr4 6022653 6022657 LFA1 TRANSFAC yes 88021039
chr4 6022661 6022669 EHF JASPAR yes 49194788
chr4 6022661 6022669 EHF JASPAR yes 88021040
SNP sites on vista43998[chr4:6022258-6022662]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6022387 rs561113530 G A
INSM1 NFE2L2
7374381
chr4 6022458 rs529367306 C T
GLIS2 GLIS3 RREB1 SP1
7374382
chr4 6022555 rs61368051 G A
MEIS2 MEIS3 PKNOX2 TGIF1
7374383
chr4 6022600 rs190169349 G T
PLAG1 TFAP2A TFAP2B TFAP2C
7374384
Genes possibly regulated by vista43998[chr4:6022258-6022662]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 5958845 5991545 - C4orf50 ENSG00000181215.8 5991545 0.98 0.86 4503 69287
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43998[chr4:6022258-6022662]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results