EnhancerDB
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  3. vista44004[chr4:6182573-6182969]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44004[chr4:6182573-6182969]
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Tissue distribution of vista44004
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Transcription factor that possibly regulate vista44004[chr4:6182573-6182969]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6182331 6183708 POLR2A UCSC Txn Factor no Conserved 108531916
chr4 6182422 6183013 PML UCSC Txn Factor no Conserved 108531917
chr4 6182422 6183057 NFIC UCSC Txn Factor no Conserved 108531918
chr4 6182457 6182998 ATF2 UCSC Txn Factor no Conserved 108531919
chr4 6182481 6183009 FOXM1 UCSC Txn Factor no Conserved 108531920
chr4 6182482 6182899 RELA UCSC Txn Factor no Conserved 108531921
chr4 6182483 6183064 RUNX3 UCSC Txn Factor no Conserved 108531922
chr4 6182503 6183008 MTA3 UCSC Txn Factor no Conserved 108531923
chr4 6182510 6182967 STAT5A UCSC Txn Factor no Conserved 108531924
chr4 6182518 6182982 NFATC1 UCSC Txn Factor no Conserved 108531925
chr4 6182572 6182942 EP300 UCSC Txn Factor no Conserved 108531926
chr4 6182579 6182893 BCL11A UCSC Txn Factor no Conserved 108531927
chr4 6182588 6182992 BATF UCSC Txn Factor no Conserved 108531928
chr4 6182599 6182959 IRF4 UCSC Txn Factor no Conserved 108531929
chr4 6182604 6182922 SP1 UCSC Txn Factor no Conserved 108531930
chr4 6182614 6182937 PAX5 UCSC Txn Factor no Conserved 108531931
chr4 6182616 6182895 POU2F2 UCSC Txn Factor no Conserved 108531932
chr4 6182629 6182959 EBF1 UCSC Txn Factor no Conserved 108531933
chr4 6182583 6182587 TEAD2 TRANSFAC yes 49195052
chr4 6182583 6182587 TEAD2 TRANSFAC yes 88027922
chr4 6182583 6182588 TBP TRANSFAC yes 49195053
chr4 6182583 6182588 TBP TRANSFAC yes 88027923
chr4 6182583 6182589 TFIID TRANSFAC yes 49195054
chr4 6182583 6182589 TFIID TRANSFAC yes 88027924
chr4 6182586 6182607 IRF1 JASPAR yes 49195055
chr4 6182586 6182607 IRF1 JASPAR yes 88027925
chr4 6182588 6182603 PRDM1 JASPAR yes 49195056
chr4 6182588 6182603 PRDM1 JASPAR yes 88027926
chr4 6182588 6182609 IRF1 JASPAR yes 49195057
chr4 6182588 6182609 IRF1 JASPAR yes 88027927
chr4 6182592 6182606 IRF7 JASPAR yes 49195058
chr4 6182592 6182606 IRF7 JASPAR yes 88027928
chr4 6182616 6182630 TLX1 JASPAR yes 49195059
chr4 6182616 6182630 TLX1 JASPAR yes 88027929
chr4 6182617 6182631 TLX1 JASPAR yes 49195060
chr4 6182617 6182631 TLX1 JASPAR yes 88027930
chr4 6182633 6182644 CEBPB JASPAR yes 49195061
chr4 6182633 6182644 CEBPB JASPAR yes 88027931
chr4 6182633 6182646 ATF4 JASPAR yes 49195062
chr4 6182633 6182646 ATF4 JASPAR yes 88027932
chr4 6182633 6182648 JUND JASPAR yes 49195063
chr4 6182633 6182648 JUND JASPAR yes 88027933
chr4 6182634 6182645 CEBPA JASPAR yes 49195064
chr4 6182634 6182645 CEBPA JASPAR yes 88027934
chr4 6182634 6182647 JUN JASPAR yes 49195065
chr4 6182634 6182647 JUN JASPAR yes 88027935
chr4 6182641 6182645 YY1 TRANSFAC yes 49195066
chr4 6182641 6182645 YY1 TRANSFAC yes 88027936
chr4 6182646 6182657 NFKB1 JASPAR yes 49195067
chr4 6182646 6182657 NFKB1 JASPAR yes 88027937
chr4 6182647 6182657 RELA JASPAR yes 49195068
chr4 6182647 6182657 REL JASPAR yes 49195069
chr4 6182647 6182657 RELA JASPAR yes 88027938
chr4 6182647 6182657 REL JASPAR yes 88027939
chr4 6182663 6182666 MYB TRANSFAC yes 49195070
chr4 6182663 6182666 MYB TRANSFAC yes 88027940
chr4 6182668 6182674 TCF4 TRANSFAC yes 49195071
chr4 6182668 6182674 TCF4 TRANSFAC yes 88027941
chr4 6182685 6182703 SRF JASPAR yes 49195072
chr4 6182685 6182703 SRF JASPAR yes 88027942
chr4 6182697 6182709 INSM1 JASPAR yes 49195073
chr4 6182697 6182709 INSM1 JASPAR yes 88027943
chr4 6182705 6182711 YY1 JASPAR yes 49195074
chr4 6182705 6182711 YY1 JASPAR yes 88027944
chr4 6182711 6182732 IRF1 JASPAR yes 49195075
chr4 6182711 6182732 IRF1 JASPAR yes 88027945
chr4 6182720 6182724 NFE TRANSFAC yes 49195076
chr4 6182720 6182724 NFE TRANSFAC yes 88027946
chr4 6182734 6182748 JUN JASPAR yes 49195077
chr4 6182734 6182748 JUN JASPAR yes 88027947
chr4 6182736 6182747 BATF JASPAR yes 49195078
chr4 6182736 6182747 BATF JASPAR yes 88027948
chr4 6182737 6182748 JUNB JASPAR yes 49195079
chr4 6182737 6182748 JUNB JASPAR yes 88027949
chr4 6182738 6182749 NFE2 JASPAR yes 49195080
chr4 6182738 6182749 NFE2 JASPAR yes 88027950
chr4 6182739 6182748 JDP2 JASPAR yes 49195081
chr4 6182739 6182748 JDP2 JASPAR yes 88027951
chr4 6182759 6182774 RUNX2 JASPAR yes 49195082
chr4 6182759 6182774 RUNX2 JASPAR yes 88027952
chr4 6182760 6182763 MYB TRANSFAC yes 49195083
chr4 6182760 6182763 MYB TRANSFAC yes 88027953
chr4 6182761 6182781 RREB1 JASPAR yes 49195084
chr4 6182761 6182781 RREB1 JASPAR yes 88027954
chr4 6182779 6182793 SPIC JASPAR yes 49195085
chr4 6182779 6182793 SPIC JASPAR yes 88027955
chr4 6182796 6182811 STAT1 JASPAR yes 49195086
chr4 6182796 6182811 STAT1 JASPAR yes 88027956
chr4 6182798 6182809 STAT3 JASPAR yes 49195087
chr4 6182798 6182809 STAT3 JASPAR yes 88027957
chr4 6182810 6182814 LFA1 TRANSFAC yes 49195088
chr4 6182810 6182814 LFA1 TRANSFAC yes 88027958
chr4 6182818 6182833 RUNX2 JASPAR yes 49195089
chr4 6182818 6182833 RUNX2 JASPAR yes 88027959
chr4 6182821 6182832 RUNX1 JASPAR yes 49195090
chr4 6182821 6182832 RUNX1 JASPAR yes 88027960
chr4 6182822 6182832 RUNX3 JASPAR yes 49195091
chr4 6182822 6182832 RUNX3 JASPAR yes 88027961
chr4 6182823 6182832 RUNX2 JASPAR yes 49195092
chr4 6182823 6182832 RUNX2 JASPAR yes 88027962
chr4 6182846 6182854 FOXC1 JASPAR yes 49195093
chr4 6182846 6182854 FOXC1 JASPAR yes 88027963
chr4 6182899 6182906 MEIS1 JASPAR yes 49195094
chr4 6182899 6182906 MEIS1 JASPAR yes 88027964
chr4 6182899 6182907 MEIS2 JASPAR yes 49195095
chr4 6182899 6182907 MEIS2 JASPAR yes 88027965
chr4 6182904 6182916 PKNOX2 JASPAR yes 49195096
chr4 6182904 6182916 PKNOX2 JASPAR yes 88027966
chr4 6182906 6182926 RREB1 JASPAR yes 49195097
chr4 6182906 6182926 RREB1 JASPAR yes 88027967
chr4 6182938 6182944 SOX10 JASPAR yes 49195098
chr4 6182938 6182944 SOX10 JASPAR yes 88027968
chr4 6182952 6182964 ZBTB7A JASPAR yes 49195099
chr4 6182952 6182964 ZBTB7A JASPAR yes 88027969
chr4 6182969 6182973 YY1 TRANSFAC yes 49195100
chr4 6182969 6182973 YY1 TRANSFAC yes 88027970
SNP sites on vista44004[chr4:6182573-6182969]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6182712 rs558612392 A G
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375320
chr4 6182717 rs11727104 G A
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375321
chr4 6182814 rs148623921 C A
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 LFA1 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375322
chr4 6182821 rs79774739 T C
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX1 RUNX2 RUNX3 SP1 STAT5A
7375323
chr4 6182836 rs114477098 C A
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375324
chr4 6182860 rs77304256 G A
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375325
chr4 6182882 rs142056052 T C
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFATC1 NFIC PAX5 PML POLR2A POU2F2 RELA RUNX3 SP1 STAT5A
7375326
chr4 6182965 rs77704640 G A
ATF2 BATF FOXM1 MTA3 NFATC1 NFIC PML POLR2A RUNX3 STAT5A
7375327
Genes possibly regulated by vista44004[chr4:6182573-6182969]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 6027926 6202318 - JAKMIP1 ENSG00000152969.12 6202318 0.94 0.9 4504 80651
chr4 6271576 6304992 + WFS1 ENSG00000109501.9 6271576 0.82 1.0 4505 11393
Expression level of Genes
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miRNAs possibly regulated by vista44004[chr4:6182573-6182969]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results