EnhancerDB
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  3. vista44005[chr4:6185514-6185738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44005[chr4:6185514-6185738]
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Tissue distribution of vista44005
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Transcription factor that possibly regulate vista44005[chr4:6185514-6185738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6185253 6186065 POLR2A UCSC Txn Factor no Conserved 108531934
chr4 6185432 6185821 RUNX3 UCSC Txn Factor no Conserved 108531935
chr4 6185445 6185764 POU2F2 UCSC Txn Factor no Conserved 108531936
chr4 6185450 6185844 EP300 UCSC Txn Factor no Conserved 108531937
chr4 6185461 6186157 NFIC UCSC Txn Factor no Conserved 108531938
chr4 6185466 6185789 ATF2 UCSC Txn Factor no Conserved 108531939
chr4 6185509 6185515 SOX10 JASPAR yes 49195101
chr4 6185509 6185515 SOX10 JASPAR yes 88028407
chr4 6185526 6185546 ESR1 JASPAR yes 49195102
chr4 6185526 6185546 ESR1 JASPAR yes 88028408
chr4 6185538 6185546 MEIS2 JASPAR yes 49195103
chr4 6185538 6185546 MEIS3 JASPAR yes 49195104
chr4 6185538 6185546 MEIS2 JASPAR yes 88028409
chr4 6185538 6185546 MEIS3 JASPAR yes 88028410
chr4 6185539 6185543 NFE TRANSFAC yes 49195105
chr4 6185539 6185543 NFE TRANSFAC yes 88028411
chr4 6185582 6185600 SRF JASPAR yes 49195106
chr4 6185582 6185600 SRF JASPAR yes 88028412
chr4 6185591 6185602 DUX4 JASPAR yes 49195107
chr4 6185591 6185602 DUX4 JASPAR yes 88028413
chr4 6185603 6185614 RUNX1 JASPAR yes 49195108
chr4 6185603 6185614 RUNX1 JASPAR yes 88028414
chr4 6185609 6185621 POU2F1 JASPAR yes 49195109
chr4 6185609 6185621 POU2F1 JASPAR yes 88028415
chr4 6185609 6185622 POU3F3 JASPAR yes 49195110
chr4 6185609 6185622 POU3F3 JASPAR yes 88028416
chr4 6185610 6185622 POU3F1 JASPAR yes 49195111
chr4 6185610 6185622 POU3F2 JASPAR yes 49195112
chr4 6185610 6185622 POU3F1 JASPAR yes 88028417
chr4 6185610 6185622 POU3F2 JASPAR yes 88028418
chr4 6185610 6185623 POU2F2 JASPAR yes 49195113
chr4 6185610 6185623 POU2F2 JASPAR yes 88028419
chr4 6185611 6185619 POU2F1 TRANSFAC yes 49195114
chr4 6185611 6185619 POU2F1 TRANSFAC yes 88028420
chr4 6185611 6185620 POU3F4 JASPAR yes 49195115
chr4 6185611 6185620 POU5F1B JASPAR yes 49195116
chr4 6185611 6185620 POU3F4 JASPAR yes 88028421
chr4 6185611 6185620 POU5F1B JASPAR yes 88028422
chr4 6185612 6185619 POU2F1 TRANSFAC yes 49195117
chr4 6185612 6185619 POU2F2 TRANSFAC yes 49195118
chr4 6185612 6185619 POU2F1 TRANSFAC yes 88028423
chr4 6185612 6185619 POU2F2 TRANSFAC yes 88028424
chr4 6185632 6185643 FOXB1 JASPAR yes 49195119
chr4 6185632 6185643 FOXC1 JASPAR yes 49195120
chr4 6185632 6185643 FOXB1 JASPAR yes 88028425
chr4 6185632 6185643 FOXC1 JASPAR yes 88028426
chr4 6185633 6185637 YY1 TRANSFAC yes 49195121
chr4 6185633 6185637 YY1 TRANSFAC yes 88028427
chr4 6185636 6185647 TBX20 JASPAR yes 49195122
chr4 6185636 6185647 TBX20 JASPAR yes 88028428
chr4 6185640 6185655 RUNX2 JASPAR yes 49195123
chr4 6185640 6185655 RUNX2 JASPAR yes 88028429
chr4 6185641 6185650 RUNX2 JASPAR yes 49195124
chr4 6185641 6185650 RUNX2 JASPAR yes 88028430
chr4 6185641 6185651 RUNX3 JASPAR yes 49195125
chr4 6185641 6185651 RUNX3 JASPAR yes 88028431
chr4 6185644 6185659 HNF4G JASPAR yes 49195126
chr4 6185644 6185659 HNF4G JASPAR yes 88028432
chr4 6185645 6185660 HNF4A JASPAR yes 49195127
chr4 6185645 6185660 HNF4A JASPAR yes 88028433
chr4 6185649 6185655 SOX10 JASPAR yes 49195128
chr4 6185649 6185655 SOX10 JASPAR yes 88028434
chr4 6185657 6185661 YY1 TRANSFAC yes 49195129
chr4 6185657 6185661 YY1 TRANSFAC yes 88028435
chr4 6185671 6185684 SCRT2 JASPAR yes 49195130
chr4 6185671 6185684 SCRT2 JASPAR yes 88028436
chr4 6185674 6185686 NHLH1 JASPAR yes 49195131
chr4 6185674 6185686 NHLH1 JASPAR yes 88028437
chr4 6185675 6185685 FIGLA JASPAR yes 49195132
chr4 6185675 6185685 MSC JASPAR yes 49195133
chr4 6185675 6185685 MYF6 JASPAR yes 49195134
chr4 6185675 6185685 NHLH1 JASPAR yes 49195135
chr4 6185675 6185685 TFAP4 JASPAR yes 49195136
chr4 6185675 6185685 FIGLA JASPAR yes 88028438
chr4 6185675 6185685 MSC JASPAR yes 88028439
chr4 6185675 6185685 MYF6 JASPAR yes 88028440
chr4 6185675 6185685 NHLH1 JASPAR yes 88028441
chr4 6185675 6185685 TFAP4 JASPAR yes 88028442
chr4 6185675 6185687 TAL1 JASPAR yes 49195137
chr4 6185675 6185687 TAL1 JASPAR yes 88028443
chr4 6185695 6185699 NFE TRANSFAC yes 49195138
chr4 6185695 6185699 NFE TRANSFAC yes 88028444
chr4 6185708 6185720 IRF1 JASPAR yes 49195139
chr4 6185708 6185720 IRF1 JASPAR yes 88028445
chr4 6185708 6185722 IRF7 JASPAR yes 49195140
chr4 6185708 6185722 IRF7 JASPAR yes 88028446
SNP sites on vista44005[chr4:6185514-6185738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6185559 rs543271320 G C
ATF2 EP300 NFIC POLR2A POU2F2 RUNX3
7375365
chr4 6185596 rs113633085 G A
ATF2 DUX4 EP300 NFIC POLR2A POU2F2 RUNX3 SRF
7375366
chr4 6185715 rs371484462 G A
ATF2 EP300 IRF1 IRF7 NFIC POLR2A POU2F2 RUNX3
7375367
Genes possibly regulated by vista44005[chr4:6185514-6185738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 6027926 6202318 - JAKMIP1 ENSG00000152969.12 6202318 0.94 0.9 4504 83420
chr4 6271576 6304992 + WFS1 ENSG00000109501.9 6271576 0.82 1.0 4505 14162
Expression level of Genes
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miRNAs possibly regulated by vista44005[chr4:6185514-6185738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results