EnhancerDB
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  3. vista44009[chr4:6278017-6278414]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44009[chr4:6278017-6278414]
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Tissue distribution of vista44009
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Transcription factor that possibly regulate vista44009[chr4:6278017-6278414]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6278015 6278030 RUNX2 JASPAR yes 49195264
chr4 6278015 6278030 RUNX2 JASPAR yes 88030998
chr4 6278025 6278037 ZBTB7B JASPAR yes 49195265
chr4 6278025 6278037 ZBTB7C JASPAR yes 49195266
chr4 6278025 6278037 ZBTB7B JASPAR yes 88030999
chr4 6278025 6278037 ZBTB7C JASPAR yes 88031000
chr4 6278026 6278038 ZBTB7A JASPAR yes 49195267
chr4 6278026 6278038 ZBTB7A JASPAR yes 88031001
chr4 6278041 6278045 YY1 TRANSFAC yes 49195268
chr4 6278041 6278045 YY1 TRANSFAC yes 88031002
chr4 6278060 6278070 NFATC3 JASPAR yes 49195269
chr4 6278060 6278070 NFATC3 JASPAR yes 88031003
chr4 6278061 6278068 NFATC2 JASPAR yes 49195270
chr4 6278061 6278068 NFATC2 JASPAR yes 88031004
chr4 6278066 6278081 RFX5 JASPAR yes 49195271
chr4 6278066 6278081 RFX5 JASPAR yes 88031005
chr4 6278126 6278138 HES7 JASPAR yes 49195272
chr4 6278126 6278138 TGIF1 JASPAR yes 49195273
chr4 6278126 6278138 TGIF2 JASPAR yes 49195274
chr4 6278126 6278138 HES7 JASPAR yes 88031006
chr4 6278126 6278138 TGIF1 JASPAR yes 88031007
chr4 6278126 6278138 TGIF2 JASPAR yes 88031008
chr4 6278129 6278142 NR2F1 JASPAR yes 49195275
chr4 6278129 6278142 NR2F1 JASPAR yes 88031009
chr4 6278133 6278137 ESR1 TRANSFAC yes 49195276
chr4 6278133 6278137 ESR1 TRANSFAC yes 88031010
chr4 6278134 6278144 BHLHE41 JASPAR yes 49195277
chr4 6278134 6278144 TFE3 JASPAR yes 49195278
chr4 6278134 6278144 TFEB JASPAR yes 49195279
chr4 6278134 6278144 BHLHE41 JASPAR yes 88031011
chr4 6278134 6278144 TFE3 JASPAR yes 88031012
chr4 6278134 6278144 TFEB JASPAR yes 88031013
chr4 6278179 6278194 FOXA1 JASPAR yes 49195280
chr4 6278179 6278194 FOXA1 JASPAR yes 88031014
chr4 6278183 6278194 FOXA1 JASPAR yes 49195281
chr4 6278183 6278194 FOXA1 JASPAR yes 88031015
chr4 6278201 6278222 IRF1 JASPAR yes 49195282
chr4 6278201 6278222 IRF1 JASPAR yes 88031016
chr4 6278225 6278229 LFA1 TRANSFAC yes 49195283
chr4 6278225 6278229 LFA1 TRANSFAC yes 88031017
chr4 6278234 6278255 REST JASPAR yes 49195284
chr4 6278234 6278255 REST JASPAR yes 88031018
chr4 6278245 6278260 RUNX2 JASPAR yes 49195285
chr4 6278245 6278260 RUNX2 JASPAR yes 88031019
chr4 6278267 6278272 SP1 TRANSFAC yes 49195286
chr4 6278267 6278272 SP1 TRANSFAC yes 88031020
chr4 6278315 6278319 YY1 TRANSFAC yes 49195287
chr4 6278315 6278319 YY1 TRANSFAC yes 88031021
chr4 6278321 6278342 ZNF263 JASPAR yes 49195288
chr4 6278321 6278342 ZNF263 JASPAR yes 88031022
chr4 6278326 6278347 ZNF263 JASPAR yes 49195289
chr4 6278326 6278347 ZNF263 JASPAR yes 88031023
chr4 6278327 6278348 ZNF263 JASPAR yes 49195290
chr4 6278327 6278348 ZNF263 JASPAR yes 88031024
chr4 6278331 6278352 ZNF263 JASPAR yes 49195291
chr4 6278331 6278352 ZNF263 JASPAR yes 88031025
chr4 6278333 6278354 ZNF263 JASPAR yes 49195292
chr4 6278333 6278354 ZNF263 JASPAR yes 88031026
chr4 6278334 6278355 ZNF263 JASPAR yes 49195293
chr4 6278334 6278355 ZNF263 JASPAR yes 88031027
chr4 6278336 6278357 ZNF263 JASPAR yes 49195294
chr4 6278336 6278357 ZNF263 JASPAR yes 88031028
chr4 6278341 6278362 ZNF263 JASPAR yes 49195295
chr4 6278341 6278362 ZNF263 JASPAR yes 88031029
chr4 6278346 6278367 ZNF263 JASPAR yes 49195296
chr4 6278346 6278367 ZNF263 JASPAR yes 88031030
chr4 6278349 6278359 MZF1 JASPAR yes 49195297
chr4 6278349 6278359 MZF1 JASPAR yes 88031031
chr4 6278349 6278370 ZNF263 JASPAR yes 49195298
chr4 6278349 6278370 ZNF263 JASPAR yes 88031032
chr4 6278352 6278358 SP1 TRANSFAC yes 49195299
chr4 6278352 6278358 SP1 TRANSFAC yes 88031033
chr4 6278352 6278362 SP1 JASPAR yes 49195300
chr4 6278352 6278362 SP1 JASPAR yes 88031034
chr4 6278353 6278374 ZNF263 JASPAR yes 49195301
chr4 6278353 6278374 ZNF263 JASPAR yes 88031035
chr4 6278356 6278362 MZF1 JASPAR yes 49195302
chr4 6278356 6278362 MZF1 JASPAR yes 88031036
chr4 6278375 6278390 FOXA1 JASPAR yes 49195303
chr4 6278375 6278390 FOXA1 JASPAR yes 88031037
chr4 6278377 6278389 FOXC2 JASPAR yes 49195304
chr4 6278377 6278389 FOXC2 JASPAR yes 88031038
chr4 6278378 6278389 FOXB1 JASPAR yes 49195305
chr4 6278378 6278389 FOXC1 JASPAR yes 49195306
chr4 6278378 6278389 FOXB1 JASPAR yes 88031039
chr4 6278378 6278389 FOXC1 JASPAR yes 88031040
chr4 6278379 6278383 YY1 TRANSFAC yes 49195307
chr4 6278379 6278383 YY1 TRANSFAC yes 88031041
chr4 6278379 6278390 FOXA1 JASPAR yes 49195308
chr4 6278379 6278390 FOXA1 JASPAR yes 88031042
chr4 6278382 6278389 NKX3-1 JASPAR yes 49195309
chr4 6278382 6278389 NKX3-1 JASPAR yes 88031043
chr4 6278387 6278390 MYB TRANSFAC yes 49195310
chr4 6278387 6278390 MYB TRANSFAC yes 88031044
chr4 6278392 6278403 BATF JASPAR yes 49195311
chr4 6278392 6278403 BATF JASPAR yes 88031045
chr4 6278412 6278429 BCL6B JASPAR yes 49195312
chr4 6278412 6278429 BCL6B JASPAR yes 88031046
SNP sites on vista44009[chr4:6278017-6278414]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6278062 rs147764877 T C
NFATC2 NFATC3
7375831
chr4 6278067 rs558526133 C T
NFATC2 NFATC3 RFX5
7375832
chr4 6278124 rs141260893 G C no 7375833
chr4 6278139 rs111823345 C T
BHLHE41 NR2F1 TFE3 TFEB
7375834
chr4 6278140 rs190484649 G A
BHLHE41 NR2F1 TFE3 TFEB
7375835
chr4 6278179 rs145117482 C T
FOXA1
7375836
chr4 6278219 rs4513637 G A
IRF1
7375837
chr4 6278237 rs193088157 C T
REST
7375838
chr4 6278239 rs112058995 C T
REST
7375839
chr4 6278251 rs4558932 C G,T
REST RUNX2
7375840
chr4 6278293 rs114778670 T C,G no 7375841
chr4 6278354 rs570753936 C G
MZF1 SP1 ZNF263
7375842
chr4 6278404 rs60400870 C T no 7375843
chr4 6278408 rs113124073 G A no 7375844
Genes possibly regulated by vista44009[chr4:6278017-6278414]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 6027926 6202318 - JAKMIP1 ENSG00000152969.12 6202318 0.94 0.9 4504 24301
chr4 6271576 6304992 + WFS1 ENSG00000109501.9 6271576 0.82 1.0 4505 93559
Expression level of Genes
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miRNAs possibly regulated by vista44009[chr4:6278017-6278414]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results