EnhancerDB
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  3. vista44016[chr4:6528356-6528632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44016[chr4:6528356-6528632]
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Tissue distribution of vista44016
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Transcription factor that possibly regulate vista44016[chr4:6528356-6528632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6528373 6528392 REST JASPAR yes 49195648
chr4 6528373 6528392 REST JASPAR yes 88042587
chr4 6528375 6528390 RFX5 JASPAR yes 49195649
chr4 6528375 6528390 RFX5 JASPAR yes 88042588
chr4 6528389 6528401 TGIF1 JASPAR yes 49195650
chr4 6528389 6528401 TGIF2 JASPAR yes 49195651
chr4 6528389 6528401 TGIF1 JASPAR yes 88042589
chr4 6528389 6528401 TGIF2 JASPAR yes 88042590
chr4 6528391 6528412 ZNF263 JASPAR yes 49195652
chr4 6528391 6528412 ZNF263 JASPAR yes 88042591
chr4 6528402 6528413 E2F6 JASPAR yes 49195653
chr4 6528402 6528413 E2F6 JASPAR yes 88042592
chr4 6528423 6528438 HNF4A JASPAR yes 49195654
chr4 6528423 6528438 HNF4A JASPAR yes 88042593
chr4 6528424 6528439 HNF4G JASPAR yes 49195655
chr4 6528424 6528439 HNF4G JASPAR yes 88042594
chr4 6528431 6528449 ESR1 JASPAR yes 49195656
chr4 6528431 6528449 ESR1 JASPAR yes 88042595
chr4 6528445 6528449 H1TF2 TRANSFAC yes 49195657
chr4 6528445 6528449 NFE TRANSFAC yes 49195658
chr4 6528445 6528449 SRF TRANSFAC yes 49195659
chr4 6528445 6528449 H1TF2 TRANSFAC yes 88042596
chr4 6528445 6528449 NFE TRANSFAC yes 88042597
chr4 6528445 6528449 SRF TRANSFAC yes 88042598
chr4 6528451 6528457 PEA3 TRANSFAC yes 49195660
chr4 6528451 6528457 PEA3 TRANSFAC yes 88042599
chr4 6528451 6528472 ZNF263 JASPAR yes 49195661
chr4 6528451 6528472 ZNF263 JASPAR yes 88042600
chr4 6528452 6528473 ZNF263 JASPAR yes 49195662
chr4 6528452 6528473 ZNF263 JASPAR yes 88042601
chr4 6528455 6528476 ZNF263 JASPAR yes 49195663
chr4 6528455 6528476 ZNF263 JASPAR yes 88042602
chr4 6528457 6528471 SPIC JASPAR yes 49195664
chr4 6528457 6528471 SPIC JASPAR yes 88042603
chr4 6528458 6528479 ZNF263 JASPAR yes 49195665
chr4 6528458 6528479 ZNF263 JASPAR yes 88042604
chr4 6528461 6528482 ZNF263 JASPAR yes 49195666
chr4 6528461 6528482 ZNF263 JASPAR yes 88042605
chr4 6528464 6528485 ZNF263 JASPAR yes 49195667
chr4 6528464 6528485 ZNF263 JASPAR yes 88042606
chr4 6528469 6528484 NR2C2 JASPAR yes 49195668
chr4 6528469 6528484 NR2C2 JASPAR yes 88042607
chr4 6528498 6528511 POU2F2 JASPAR yes 49195669
chr4 6528498 6528511 POU2F2 JASPAR yes 88042608
chr4 6528499 6528511 POU3F1 JASPAR yes 49195670
chr4 6528499 6528511 POU3F2 JASPAR yes 49195671
chr4 6528499 6528511 POU3F1 JASPAR yes 88042609
chr4 6528499 6528511 POU3F2 JASPAR yes 88042610
chr4 6528500 6528512 POU2F1 JASPAR yes 49195672
chr4 6528500 6528512 POU2F1 JASPAR yes 88042611
chr4 6528501 6528510 POU3F4 JASPAR yes 49195673
chr4 6528501 6528510 POU5F1B JASPAR yes 49195674
chr4 6528501 6528510 POU3F4 JASPAR yes 88042612
chr4 6528501 6528510 POU5F1B JASPAR yes 88042613
chr4 6528503 6528517 POU4F1 JASPAR yes 49195675
chr4 6528503 6528517 POU4F1 JASPAR yes 88042614
chr4 6528503 6528519 POU4F2 JASPAR yes 49195676
chr4 6528503 6528519 POU4F3 JASPAR yes 49195677
chr4 6528503 6528519 POU4F2 JASPAR yes 88042615
chr4 6528503 6528519 POU4F3 JASPAR yes 88042616
chr4 6528509 6528522 POU2F2 JASPAR yes 49195678
chr4 6528509 6528522 POU2F2 JASPAR yes 88042617
chr4 6528512 6528525 POU2F2 JASPAR yes 49195679
chr4 6528512 6528525 POU2F2 JASPAR yes 88042618
chr4 6528515 6528531 ZNF143 JASPAR yes 49195680
chr4 6528515 6528531 ZNF143 JASPAR yes 88042619
chr4 6528524 6528538 TLX1 JASPAR yes 49195681
chr4 6528524 6528538 TLX1 JASPAR yes 88042620
chr4 6528529 6528543 GLIS3 JASPAR yes 49195682
chr4 6528529 6528543 ZIC1 JASPAR yes 49195683
chr4 6528529 6528543 GLIS3 JASPAR yes 88042621
chr4 6528529 6528543 ZIC1 JASPAR yes 88042622
chr4 6528529 6528544 ZIC3 JASPAR yes 49195684
chr4 6528529 6528544 ZIC4 JASPAR yes 49195685
chr4 6528529 6528544 ZIC3 JASPAR yes 88042623
chr4 6528529 6528544 ZIC4 JASPAR yes 88042624
chr4 6528543 6528557 IRF7 JASPAR yes 49195686
chr4 6528543 6528557 IRF7 JASPAR yes 88042625
chr4 6528546 6528567 MAFG JASPAR yes 49195687
chr4 6528546 6528567 MAFG JASPAR yes 88042626
chr4 6528558 6528578 RREB1 JASPAR yes 49195688
chr4 6528558 6528578 RREB1 JASPAR yes 88042627
chr4 6528561 6528581 RREB1 JASPAR yes 49195689
chr4 6528561 6528581 RREB1 JASPAR yes 88042628
chr4 6528565 6528571 MZF1 JASPAR yes 49195690
chr4 6528565 6528571 MZF1 JASPAR yes 88042629
chr4 6528574 6528584 POU6F2 JASPAR yes 49195691
chr4 6528574 6528584 POU6F2 JASPAR yes 88042630
chr4 6528575 6528585 GSX1 JASPAR yes 49195692
chr4 6528575 6528585 NOTO JASPAR yes 49195693
chr4 6528575 6528585 GSX1 JASPAR yes 88042631
chr4 6528575 6528585 NOTO JASPAR yes 88042632
chr4 6528576 6528584 NKX6-1 JASPAR yes 49195694
chr4 6528576 6528584 NKX6-2 JASPAR yes 49195695
chr4 6528576 6528584 NKX6-1 JASPAR yes 88042633
chr4 6528576 6528584 NKX6-2 JASPAR yes 88042634
chr4 6528578 6528582 YY1 TRANSFAC yes 49195696
chr4 6528578 6528582 YY1 TRANSFAC yes 88042635
chr4 6528580 6528588 ISL2 JASPAR yes 49195697
chr4 6528580 6528588 ISL2 JASPAR yes 88042636
chr4 6528580 6528589 NKX3-2 JASPAR yes 49195698
chr4 6528580 6528589 NKX3-2 JASPAR yes 88042637
chr4 6528600 6528615 TFAP2C JASPAR yes 49195699
chr4 6528600 6528615 TFAP2C JASPAR yes 88042638
chr4 6528605 6528615 SP1 JASPAR yes 49195700
chr4 6528605 6528615 SP1 JASPAR yes 88042639
chr4 6528606 6528613 CEBPA TRANSFAC yes 49195701
chr4 6528606 6528613 CEBPA TRANSFAC yes 88042640
chr4 6528608 6528618 MZF1 JASPAR yes 49195702
chr4 6528608 6528618 MZF1 JASPAR yes 88042641
chr4 6528619 6528625 YY1 JASPAR yes 49195703
chr4 6528619 6528625 YY1 JASPAR yes 88042642
SNP sites on vista44016[chr4:6528356-6528632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6528436 rs149346447 C A
ESR1 HNF4A HNF4G
7377543
chr4 6528442 rs144693484 C A
ESR1
7377544
chr4 6528541 rs530235313 G A
GLIS3 ZIC1 ZIC3 ZIC4
7377545
chr4 6528599 rs566689842 G A no 7377546
Genes possibly regulated by vista44016[chr4:6528356-6528632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 6322305 6565327 - PPP2R2C ENSG00000074211.9 6565327 0.92 1.0 4506 63305
chr4 6576902 6625089 + MAN2B2 ENSG00000013288.4 6576902 0.66 1.0 4507 51730
Expression level of Genes
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miRNAs possibly regulated by vista44016[chr4:6528356-6528632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results