EnhancerDB
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  3. vista44046[chr4:6989470-6989868]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44046[chr4:6989470-6989868]
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Tissue distribution of vista44046
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Transcription factor that possibly regulate vista44046[chr4:6989470-6989868]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 6988201 6989744 POLR2A UCSC Txn Factor no Conserved 108532011
chr4 6989466 6989472 LEF1 TRANSFAC yes 49197156
chr4 6989466 6989472 SOX10 JASPAR yes 49197157
chr4 6989466 6989472 LEF1 TRANSFAC yes 88078855
chr4 6989466 6989472 SOX10 JASPAR yes 88078856
chr4 6989505 6989509 H1TF2 TRANSFAC yes 49197158
chr4 6989505 6989509 NFE TRANSFAC yes 49197159
chr4 6989505 6989509 SRF TRANSFAC yes 49197160
chr4 6989505 6989509 H1TF2 TRANSFAC yes 88078857
chr4 6989505 6989509 NFE TRANSFAC yes 88078858
chr4 6989505 6989509 SRF TRANSFAC yes 88078859
chr4 6989515 6989519 ESR1 TRANSFAC yes 49197161
chr4 6989515 6989519 ESR1 TRANSFAC yes 88078860
chr4 6989520 6989533 ATF4 JASPAR yes 49197162
chr4 6989520 6989533 ATF4 JASPAR yes 88078861
chr4 6989520 6989536 RFX5 JASPAR yes 49197163
chr4 6989520 6989536 RFX5 JASPAR yes 88078862
chr4 6989521 6989540 RFX2 JASPAR yes 49197164
chr4 6989521 6989540 RFX2 JASPAR yes 88078863
chr4 6989554 6989559 ETS2 TRANSFAC yes 49197165
chr4 6989554 6989559 ETS2 TRANSFAC yes 88078864
chr4 6989579 6989589 GCM2 JASPAR yes 49197166
chr4 6989579 6989589 GCM2 JASPAR yes 88078865
chr4 6989590 6989593 MYB TRANSFAC yes 49197167
chr4 6989590 6989593 MYB TRANSFAC yes 88078866
chr4 6989590 6989605 LEF1 JASPAR yes 49197168
chr4 6989590 6989605 LEF1 JASPAR yes 88078867
chr4 6989607 6989613 PEA3 TRANSFAC yes 49197169
chr4 6989607 6989613 PEA3 TRANSFAC yes 88078868
chr4 6989643 6989658 STAT1 JASPAR yes 49197170
chr4 6989643 6989658 STAT1 JASPAR yes 88078869
chr4 6989645 6989656 STAT1 JASPAR yes 49197171
chr4 6989645 6989656 STAT3 JASPAR yes 49197172
chr4 6989645 6989656 STAT1 JASPAR yes 88078870
chr4 6989645 6989656 STAT3 JASPAR yes 88078871
chr4 6989646 6989662 ZNF143 JASPAR yes 49197173
chr4 6989646 6989662 ZNF143 JASPAR yes 88078872
chr4 6989653 6989663 NFIA JASPAR yes 49197174
chr4 6989653 6989663 NFIA JASPAR yes 88078873
chr4 6989653 6989664 FOXC1 JASPAR yes 49197175
chr4 6989653 6989664 FOXC1 JASPAR yes 88078874
chr4 6989653 6989665 FOXC2 JASPAR yes 49197176
chr4 6989653 6989665 FOXC2 JASPAR yes 88078875
chr4 6989655 6989661 NFIC JASPAR yes 49197177
chr4 6989655 6989661 NFIC JASPAR yes 88078876
chr4 6989670 6989673 MYB TRANSFAC yes 49197178
chr4 6989670 6989673 MYB TRANSFAC yes 88078877
chr4 6989683 6989698 STAT1 JASPAR yes 49197179
chr4 6989683 6989698 STAT1 JASPAR yes 88078878
chr4 6989685 6989704 CTCF JASPAR yes 49197180
chr4 6989685 6989704 CTCF JASPAR yes 88078879
chr4 6989704 6989715 HOXC13 JASPAR yes 49197181
chr4 6989704 6989715 HOXC13 JASPAR yes 88078880
chr4 6989710 6989731 REST JASPAR yes 49197182
chr4 6989710 6989731 REST JASPAR yes 88078881
chr4 6989725 6989732 SPIB JASPAR yes 49197183
chr4 6989725 6989732 SPIB JASPAR yes 88078882
chr4 6989733 6989746 ZBTB18 JASPAR yes 49197184
chr4 6989733 6989746 ZBTB18 JASPAR yes 88078883
chr4 6989755 6989762 NKX3-1 JASPAR yes 49197185
chr4 6989755 6989762 NKX3-1 JASPAR yes 88078884
chr4 6989758 6989772 GLIS3 JASPAR yes 49197186
chr4 6989758 6989772 GLIS3 JASPAR yes 88078885
chr4 6989765 6989773 CREB1 JASPAR yes 49197187
chr4 6989765 6989773 CREB1 JASPAR yes 88078886
chr4 6989768 6989772 ESR1 TRANSFAC yes 49197188
chr4 6989768 6989772 ESR1 TRANSFAC yes 88078887
chr4 6989773 6989787 NR2F1 JASPAR yes 49197189
chr4 6989773 6989787 NR2F1 JASPAR yes 88078888
chr4 6989806 6989814 TBX15 JASPAR yes 49197190
chr4 6989806 6989814 TBX15 JASPAR yes 88078889
chr4 6989807 6989812 SP1 TRANSFAC yes 49197191
chr4 6989807 6989812 SP1 TRANSFAC yes 88078890
chr4 6989811 6989828 RARA JASPAR yes 49197192
chr4 6989811 6989828 RARA JASPAR yes 88078891
chr4 6989841 6989851 MZF1 JASPAR yes 49197193
chr4 6989841 6989851 MZF1 JASPAR yes 88078892
chr4 6989849 6989861 YY1 JASPAR yes 49197194
chr4 6989849 6989861 YY1 JASPAR yes 88078893
chr4 6989865 6989871 SP1 TRANSFAC yes 49197195
chr4 6989865 6989871 SP1 TRANSFAC yes 88078894
chr4 6989865 6989875 SP1 JASPAR yes 49197196
chr4 6989865 6989875 SP1 JASPAR yes 88078895
chr4 6989868 6989881 ZBTB18 JASPAR yes 49197197
chr4 6989868 6989881 ZBTB18 JASPAR yes 88078896
SNP sites on vista44046[chr4:6989470-6989868]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 6989568 rs181534812 G A
POLR2A
7382382
chr4 6989621 rs7689324 T G
POLR2A
7382383
chr4 6989663 rs115194121 A T
FOXC1 FOXC2 NFIA POLR2A
7382384
chr4 6989666 rs537186607 C T
POLR2A
7382385
chr4 6989678 rs149452464 G A
POLR2A
7382386
chr4 6989697 rs373995152 G A
CTCF POLR2A STAT1
7382387
chr4 6989718 rs56081162 C T
POLR2A REST
7382388
chr4 6989794 rs143896995 G A no 7382389
chr4 6989810 rs554142261 T G
SP1 TBX15
7382390
Genes possibly regulated by vista44046[chr4:6989470-6989868]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 6910969 7034845 + TBC1D14 ENSG00000132405.14 6910969 0.74 1.0 4514 21499
chr4 7042579 7044728 - CCDC96 ENSG00000173013.4 7044728 0.71 0.99 4515 45140
chr4 7043626 7059679 + TADA2B ENSG00000173011.11 7043626 0.58 1.0 4516 46242
chr4 7060633 7069924 - GRPEL1 ENSG00000109519.8 7069924 0.77 0.99 4517 19944
Expression level of Genes
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miRNAs possibly regulated by vista44046[chr4:6989470-6989868]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results