EnhancerDB
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  3. vista44047[chr4:7012933-7013112]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44047[chr4:7012933-7013112]
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Tissue distribution of vista44047
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Transcription factor that possibly regulate vista44047[chr4:7012933-7013112]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 7012974 7012978 YY1 TRANSFAC yes 49197198
chr4 7012992 7012996 YY1 TRANSFAC yes 49197199
chr4 7013016 7013026 HOXC10 JASPAR yes 49197200
chr4 7013016 7013026 HOXD11 JASPAR yes 49197201
chr4 7013017 7013026 CDX1 JASPAR yes 49197202
chr4 7013017 7013028 CDX2 JASPAR yes 49197203
chr4 7013021 7013032 NFE2L2 JASPAR yes 49197204
chr4 7013038 7013059 ZNF263 JASPAR yes 49197205
chr4 7013040 7013045 SP1 TRANSFAC yes 49197206
chr4 7013046 7013061 ZIC3 JASPAR yes 49197207
chr4 7013046 7013061 ZIC4 JASPAR yes 49197208
chr4 7013046 7013062 GLIS1 JASPAR yes 49197209
chr4 7013047 7013061 GLIS2 JASPAR yes 49197210
chr4 7013047 7013061 GLIS3 JASPAR yes 49197211
chr4 7013047 7013061 ZIC1 JASPAR yes 49197212
chr4 7013051 7013061 ZNF740 JASPAR yes 49197213
chr4 7013053 7013063 SP1 JASPAR yes 49197214
chr4 7013054 7013075 ZNF263 JASPAR yes 49197215
chr4 7013062 7013077 ZIC3 JASPAR yes 49197216
chr4 7013062 7013077 ZIC4 JASPAR yes 49197217
chr4 7013062 7013078 GLIS1 JASPAR yes 49197218
chr4 7013063 7013077 GLIS2 JASPAR yes 49197219
chr4 7013063 7013077 GLIS3 JASPAR yes 49197220
chr4 7013063 7013077 ZIC1 JASPAR yes 49197221
chr4 7013067 7013077 ZNF740 JASPAR yes 49197222
chr4 7013070 7013084 NR2F1 JASPAR yes 49197223
chr4 7013071 7013081 SP1 JASPAR yes 49197224
chr4 7013094 7013102 GATA3 JASPAR yes 49197225
SNP sites on vista44047[chr4:7012933-7013112]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 7012969 rs140968032 C T no 7382569
chr4 7012987 rs7664626 G C no 7382570
chr4 7013021 rs115026953 T C
CDX1 CDX2 HOXC10 HOXD11 NFE2L2
7382571
chr4 7013032 rs3857173 G T
NFE2L2
7382572
chr4 7013044 rs150708290 CGGTGACAGTGGGGGGT C
SP1 ZNF263
7382573
chr4 7013045 rs181575562 G A
SP1 ZNF263
7382574
chr4 7013069 rs374665716 T TG
GLIS1 GLIS2 GLIS3 ZIC1 ZIC3 ZIC4 ZNF263 ZNF740
7382575
chr4 7013069 rs533827748 T TG
GLIS1 GLIS2 GLIS3 ZIC1 ZIC3 ZIC4 ZNF263 ZNF740
7382576
Genes possibly regulated by vista44047[chr4:7012933-7013112]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 7042579 7044728 - CCDC96 ENSG00000173013.4 7044728 0.71 0.99 4515 68384
chr4 7043626 7059679 + TADA2B ENSG00000173011.11 7043626 0.58 1.0 4516 69486
chr4 7060633 7069924 - GRPEL1 ENSG00000109519.8 7069924 0.77 0.99 4517 43188
Expression level of Genes
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miRNAs possibly regulated by vista44047[chr4:7012933-7013112]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results