EnhancerDB
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  3. vista44050[chr4:7142827-7143002]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44050[chr4:7142827-7143002]
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Tissue distribution of vista44050
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Transcription factor that possibly regulate vista44050[chr4:7142827-7143002]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 7142834 7142845 E2F6 JASPAR yes 49197310
chr4 7142834 7142845 E2F6 JASPAR yes 88089608
chr4 7142836 7142853 RXRA JASPAR yes 49197311
chr4 7142836 7142853 RXRA JASPAR yes 88089609
chr4 7142847 7142868 ZNF263 JASPAR yes 49197312
chr4 7142847 7142868 ZNF263 JASPAR yes 88089610
chr4 7142867 7142884 RXRA JASPAR yes 49197313
chr4 7142867 7142884 RXRA JASPAR yes 88089611
chr4 7142871 7142875 NFE TRANSFAC yes 49197314
chr4 7142871 7142875 NFE TRANSFAC yes 88089612
chr4 7142874 7142887 NR2F1 JASPAR yes 49197315
chr4 7142874 7142887 NR2F1 JASPAR yes 88089613
chr4 7142877 7142885 NR4A2 JASPAR yes 49197316
chr4 7142877 7142885 NR4A2 JASPAR yes 88089614
chr4 7142878 7142888 RORA JASPAR yes 49197317
chr4 7142878 7142888 RORA JASPAR yes 88089615
chr4 7142919 7142934 STAT1 JASPAR yes 49197318
chr4 7142919 7142934 STAT1 JASPAR yes 88089616
chr4 7142926 7142932 ETS1 JASPAR yes 49197319
chr4 7142926 7142932 SPI1 JASPAR yes 49197320
chr4 7142926 7142932 ETS1 JASPAR yes 88089617
chr4 7142926 7142932 SPI1 JASPAR yes 88089618
chr4 7142930 7142942 TFAP2A JASPAR yes 49197321
chr4 7142930 7142942 TFAP2B JASPAR yes 49197322
chr4 7142930 7142942 TFAP2C JASPAR yes 49197323
chr4 7142930 7142942 TFAP2A JASPAR yes 88089619
chr4 7142930 7142942 TFAP2B JASPAR yes 88089620
chr4 7142930 7142942 TFAP2C JASPAR yes 88089621
chr4 7142931 7142940 TFAP2A JASPAR yes 49197324
chr4 7142931 7142940 TFAP2A JASPAR yes 88089622
chr4 7142939 7142943 H4TF2 TRANSFAC yes 49197325
chr4 7142939 7142943 H4TF2 TRANSFAC yes 88089623
chr4 7142954 7142964 TFEC JASPAR yes 49197326
chr4 7142954 7142964 TFEC JASPAR yes 88089624
chr4 7142967 7142977 NKX2-3 JASPAR yes 49197327
chr4 7142967 7142977 NKX2-3 JASPAR yes 88089625
chr4 7142968 7142977 NKX2-8 JASPAR yes 49197328
chr4 7142968 7142977 NKX2-8 JASPAR yes 88089626
chr4 7142985 7142989 NFE TRANSFAC yes 49197329
chr4 7142985 7142989 NFE TRANSFAC yes 88089627
chr4 7142987 7143006 REST JASPAR yes 49197330
chr4 7142987 7143006 REST JASPAR yes 88089628
chr4 7142991 7143005 MTF1 JASPAR yes 49197331
chr4 7142991 7143005 MTF1 JASPAR yes 88089629
chr4 7142996 7143007 ELK4 JASPAR yes 49197332
chr4 7142996 7143007 ELK4 JASPAR yes 88089630
chr4 7142996 7143009 ELF3 JASPAR yes 49197333
chr4 7142996 7143009 ELF3 JASPAR yes 88089631
chr4 7142997 7143007 ELK1 JASPAR yes 49197334
chr4 7142997 7143007 ELK3 JASPAR yes 49197335
chr4 7142997 7143007 ERF JASPAR yes 49197336
chr4 7142997 7143007 ERG JASPAR yes 49197337
chr4 7142997 7143007 ETS1 JASPAR yes 49197338
chr4 7142997 7143007 ETV1 JASPAR yes 49197339
chr4 7142997 7143007 ETV3 JASPAR yes 49197340
chr4 7142997 7143007 ETV4 JASPAR yes 49197341
chr4 7142997 7143007 ETV5 JASPAR yes 49197342
chr4 7142997 7143007 ETV6 JASPAR yes 49197343
chr4 7142997 7143007 FEV JASPAR yes 49197344
chr4 7142997 7143007 FLI1 JASPAR yes 49197345
chr4 7142997 7143007 GABPA JASPAR yes 49197346
chr4 7142997 7143007 ELK1 JASPAR yes 88089632
chr4 7142997 7143007 ELK3 JASPAR yes 88089633
chr4 7142997 7143007 ERF JASPAR yes 88089634
chr4 7142997 7143007 ERG JASPAR yes 88089635
chr4 7142997 7143007 ETS1 JASPAR yes 88089636
chr4 7142997 7143007 ETV1 JASPAR yes 88089637
chr4 7142997 7143007 ETV3 JASPAR yes 88089638
chr4 7142997 7143007 ETV4 JASPAR yes 88089639
chr4 7142997 7143007 ETV5 JASPAR yes 88089640
chr4 7142997 7143007 ETV6 JASPAR yes 88089641
chr4 7142997 7143007 FEV JASPAR yes 88089642
chr4 7142997 7143007 FLI1 JASPAR yes 88089643
chr4 7142997 7143007 GABPA JASPAR yes 88089644
chr4 7142997 7143008 ELF5 JASPAR yes 49197347
chr4 7142997 7143008 SPDEF JASPAR yes 49197348
chr4 7142997 7143008 ELF5 JASPAR yes 88089645
chr4 7142997 7143008 SPDEF JASPAR yes 88089646
chr4 7142997 7143009 EHF JASPAR yes 49197349
chr4 7142997 7143009 ELF1 JASPAR yes 49197350
chr4 7142997 7143009 ELF4 JASPAR yes 49197351
chr4 7142997 7143009 EHF JASPAR yes 88089647
chr4 7142997 7143009 ELF1 JASPAR yes 88089648
chr4 7142997 7143009 ELF4 JASPAR yes 88089649
chr4 7142997 7143010 ELF1 JASPAR yes 49197352
chr4 7142997 7143010 ELF1 JASPAR yes 88089650
chr4 7142998 7143006 FEV JASPAR yes 49197353
chr4 7142998 7143006 FEV JASPAR yes 88089651
chr4 7142998 7143007 ELK4 JASPAR yes 49197354
chr4 7142998 7143007 ELK4 JASPAR yes 88089652
chr4 7142999 7143005 ETS1 JASPAR yes 49197355
chr4 7142999 7143005 SPI1 JASPAR yes 49197356
chr4 7142999 7143005 ETS1 JASPAR yes 88089653
chr4 7142999 7143005 SPI1 JASPAR yes 88089654
chr4 7142999 7143009 ELK1 JASPAR yes 49197357
chr4 7142999 7143009 ELK1 JASPAR yes 88089655
SNP sites on vista44050[chr4:7142827-7143002]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 7142868 rs7687509 A G
RXRA ZNF263
7383745
chr4 7142915 rs138583576 G C no 7383746
chr4 7142927 rs12510356 C G
ETS1 SPI1 STAT1
7383747
chr4 7142936 rs73204527 T G
TFAP2A TFAP2B TFAP2C
7383748
chr4 7142947 rs79353301 C G no 7383749
chr4 7142970 rs3857190 C T
NKX2-3 NKX2-8
7383750
chr4 7142981 rs55752179 C A no 7383751
Genes possibly regulated by vista44050[chr4:7142827-7143002]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 7042579 7044728 - CCDC96 ENSG00000173013.4 7044728 0.71 0.99 4515 1901
chr4 7043626 7059679 + TADA2B ENSG00000173011.11 7043626 0.58 1.0 4516 799
chr4 7060633 7069924 - GRPEL1 ENSG00000109519.8 7069924 0.77 0.99 4517 27097
chr4 7194265 7744554 + SORCS2 ENSG00000184985.12 7194265 0.74 0.99 4518 48737
Expression level of Genes
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miRNAs possibly regulated by vista44050[chr4:7142827-7143002]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr4 7312223 7312244 + hsa-miR-4798-3p MIMAT0019975 7194294 0.0007681910559223641 0.916667 0.0 1227
Expression level of miRNAs
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