EnhancerDB
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  3. vista44074[chr4:7877911-7878253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44074[chr4:7877911-7878253]
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Tissue distribution of vista44074
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Transcription factor that possibly regulate vista44074[chr4:7877911-7878253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 7877796 7878249 CTCF UCSC Txn Factor no Conserved 108532031
chr4 7877837 7878161 REST UCSC Txn Factor no Conserved 108532032
chr4 7877875 7878152 RAD21 UCSC Txn Factor no Conserved 108532033
chr4 7877908 7877927 CTCF JASPAR yes 49198435
chr4 7877908 7877927 CTCF JASPAR yes 88138665
chr4 7877975 7877996 REST JASPAR yes 49198436
chr4 7877975 7877996 REST JASPAR yes 88138666
chr4 7877988 7877993 GATA1 TRANSFAC yes 49198437
chr4 7877988 7877993 GATA1 TRANSFAC yes 88138667
chr4 7878024 7878033 RUNX2 JASPAR yes 49198438
chr4 7878024 7878033 RUNX2 JASPAR yes 88138668
chr4 7878024 7878034 RUNX3 JASPAR yes 49198439
chr4 7878024 7878034 RUNX3 JASPAR yes 88138669
chr4 7878066 7878070 H4TF2 TRANSFAC yes 49198440
chr4 7878066 7878070 H4TF2 TRANSFAC yes 88138670
chr4 7878093 7878110 PAX9 JASPAR yes 49198441
chr4 7878093 7878110 PAX9 JASPAR yes 88138671
chr4 7878099 7878109 HOXB13 JASPAR yes 49198442
chr4 7878099 7878109 HOXB13 JASPAR yes 88138672
chr4 7878100 7878110 ALX3 JASPAR yes 49198443
chr4 7878100 7878110 EN2 JASPAR yes 49198444
chr4 7878100 7878110 ESX1 JASPAR yes 49198445
chr4 7878100 7878110 GBX2 JASPAR yes 49198446
chr4 7878100 7878110 GSX1 JASPAR yes 49198447
chr4 7878100 7878110 GSX2 JASPAR yes 49198448
chr4 7878100 7878110 HESX1 JASPAR yes 49198449
chr4 7878100 7878110 LBX2 JASPAR yes 49198450
chr4 7878100 7878110 LHX2 JASPAR yes 49198451
chr4 7878100 7878110 MIXL1 JASPAR yes 49198452
chr4 7878100 7878110 RAX JASPAR yes 49198453
chr4 7878100 7878110 ALX3 JASPAR yes 88138673
chr4 7878100 7878110 EN2 JASPAR yes 88138674
chr4 7878100 7878110 ESX1 JASPAR yes 88138675
chr4 7878100 7878110 GBX2 JASPAR yes 88138676
chr4 7878100 7878110 GSX1 JASPAR yes 88138677
chr4 7878100 7878110 GSX2 JASPAR yes 88138678
chr4 7878100 7878110 HESX1 JASPAR yes 88138679
chr4 7878100 7878110 LBX2 JASPAR yes 88138680
chr4 7878100 7878110 LHX2 JASPAR yes 88138681
chr4 7878100 7878110 MIXL1 JASPAR yes 88138682
chr4 7878100 7878110 RAX JASPAR yes 88138683
chr4 7878101 7878109 BARX1 JASPAR yes 49198454
chr4 7878101 7878109 BSX JASPAR yes 49198455
chr4 7878101 7878109 DLX6 JASPAR yes 49198456
chr4 7878101 7878109 ISX JASPAR yes 49198457
chr4 7878101 7878109 LBX1 JASPAR yes 49198458
chr4 7878101 7878109 LHX9 JASPAR yes 49198459
chr4 7878101 7878109 MSX1 JASPAR yes 49198460
chr4 7878101 7878109 MSX2 JASPAR yes 49198461
chr4 7878101 7878109 NKX6-2 JASPAR yes 49198462
chr4 7878101 7878109 PRRX1 JASPAR yes 49198463
chr4 7878101 7878109 RAX2 JASPAR yes 49198464
chr4 7878101 7878109 SHOX JASPAR yes 49198465
chr4 7878101 7878109 UNCX JASPAR yes 49198466
chr4 7878101 7878109 BARX1 JASPAR yes 88138684
chr4 7878101 7878109 BSX JASPAR yes 88138685
chr4 7878101 7878109 DLX6 JASPAR yes 88138686
chr4 7878101 7878109 ISX JASPAR yes 88138687
chr4 7878101 7878109 LBX1 JASPAR yes 88138688
chr4 7878101 7878109 LHX9 JASPAR yes 88138689
chr4 7878101 7878109 MSX1 JASPAR yes 88138690
chr4 7878101 7878109 MSX2 JASPAR yes 88138691
chr4 7878101 7878109 NKX6-2 JASPAR yes 88138692
chr4 7878101 7878109 PRRX1 JASPAR yes 88138693
chr4 7878101 7878109 RAX2 JASPAR yes 88138694
chr4 7878101 7878109 SHOX JASPAR yes 88138695
chr4 7878101 7878109 UNCX JASPAR yes 88138696
chr4 7878126 7878138 PBX1 JASPAR yes 49198467
chr4 7878126 7878138 PBX1 JASPAR yes 88138697
chr4 7878145 7878152 SPIB JASPAR yes 49198468
chr4 7878145 7878152 SPIB JASPAR yes 88138698
chr4 7878150 7878154 NFE TRANSFAC yes 49198469
chr4 7878150 7878154 NFE TRANSFAC yes 88138699
chr4 7878150 7878155 GATA1 TRANSFAC yes 49198470
chr4 7878150 7878155 GATA1 TRANSFAC yes 88138700
chr4 7878150 7878156 GATA3 JASPAR yes 49198471
chr4 7878150 7878156 GATA3 JASPAR yes 88138701
chr4 7878178 7878193 IRF9 JASPAR yes 49198472
chr4 7878178 7878193 IRF9 JASPAR yes 88138702
chr4 7878214 7878220 HiNF-A TRANSFAC yes 49198473
chr4 7878214 7878220 HiNF-A TRANSFAC yes 88138703
chr4 7878230 7878234 LFA1 TRANSFAC yes 49198474
chr4 7878230 7878234 LFA1 TRANSFAC yes 88138704
chr4 7878247 7878262 HNF4G JASPAR yes 49198475
chr4 7878247 7878262 HNF4G JASPAR yes 88138705
chr4 7878248 7878262 RXRB JASPAR yes 49198476
chr4 7878248 7878262 RXRG JASPAR yes 49198477
chr4 7878248 7878262 RXRB JASPAR yes 88138706
chr4 7878248 7878262 RXRG JASPAR yes 88138707
chr4 7878248 7878263 HNF4A JASPAR yes 49198478
chr4 7878248 7878263 HNF4A JASPAR yes 88138708
chr4 7878251 7878257 TCF4 TRANSFAC yes 49198479
chr4 7878251 7878257 TCF4 TRANSFAC yes 88138709
SNP sites on vista44074[chr4:7877911-7878253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 7877939 rs62289337 G A
CTCF RAD21 REST
7391491
chr4 7877973 rs114536570 C A,T
CTCF RAD21 REST
7391492
chr4 7877974 rs115190291 G A
CTCF RAD21 REST
7391493
chr4 7877977 rs75946872 G A
CTCF RAD21 REST
7391494
chr4 7877999 rs114471549 A G
CTCF RAD21 REST
7391495
chr4 7878008 rs149627968 T A
CTCF RAD21 REST
7391496
chr4 7878188 rs184469868 T A
CTCF IRF9
7391497
chr4 7878248 rs528955036 C T
CTCF HNF4A HNF4G RXRB RXRG
7391498
Genes possibly regulated by vista44074[chr4:7877911-7878253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 7760441 7941653 - AFAP1 ENSG00000196526.6 7941653 0.68 0.99 4520 36600
chr4 7940728 7942022 + AC097381.1 ENSG00000228919.3 7940728 0.77 1.0 4521 37525
Expression level of Genes
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miRNAs possibly regulated by vista44074[chr4:7877911-7878253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results