EnhancerDB
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  3. vista44076[chr4:7962509-7962775]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44076[chr4:7962509-7962775]
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Tissue distribution of vista44076
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Transcription factor that possibly regulate vista44076[chr4:7962509-7962775]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 7962360 7962744 USF1 UCSC Txn Factor no Conserved 108532035
chr4 7962531 7962787 CEBPB UCSC Txn Factor no Conserved 108532036
chr4 7962666 7962903 RUNX3 UCSC Txn Factor no Conserved 108532037
chr4 7962520 7962525 TFAP2A TRANSFAC yes 49198518
chr4 7962520 7962525 TFAP2A TRANSFAC yes 88147879
chr4 7962520 7962526 MZF1 JASPAR yes 49198519
chr4 7962520 7962526 MZF1 JASPAR yes 88147880
chr4 7962523 7962528 GATA2 JASPAR yes 49198520
chr4 7962523 7962528 GATA2 JASPAR yes 88147881
chr4 7962538 7962542 YY1 TRANSFAC yes 49198521
chr4 7962538 7962542 YY1 TRANSFAC yes 88147882
chr4 7962548 7962557 PITX3 JASPAR yes 49198522
chr4 7962548 7962557 PITX3 JASPAR yes 88147883
chr4 7962556 7962566 TFEB JASPAR yes 49198523
chr4 7962556 7962566 TFEC JASPAR yes 49198524
chr4 7962556 7962566 TFEB JASPAR yes 88147884
chr4 7962556 7962566 TFEC JASPAR yes 88147885
chr4 7962556 7962567 USF1 JASPAR yes 49198525
chr4 7962556 7962567 USF2 JASPAR yes 49198526
chr4 7962556 7962567 USF1 JASPAR yes 88147886
chr4 7962556 7962567 USF2 JASPAR yes 88147887
chr4 7962562 7962579 RARA JASPAR yes 49198527
chr4 7962562 7962579 RARA JASPAR yes 88147888
chr4 7962573 7962576 MYB TRANSFAC yes 49198528
chr4 7962573 7962576 MYB TRANSFAC yes 88147889
chr4 7962577 7962597 TP53 JASPAR yes 49198529
chr4 7962577 7962597 TP53 JASPAR yes 88147890
chr4 7962637 7962658 ZNF263 JASPAR yes 49198530
chr4 7962637 7962658 ZNF263 JASPAR yes 88147891
chr4 7962692 7962706 MTF1 JASPAR yes 49198531
chr4 7962692 7962706 MTF1 JASPAR yes 88147892
chr4 7962712 7962722 TEAD1 JASPAR yes 49198532
chr4 7962712 7962722 TEAD4 JASPAR yes 49198533
chr4 7962712 7962722 TEAD1 JASPAR yes 88147893
chr4 7962712 7962722 TEAD4 JASPAR yes 88147894
chr4 7962712 7962724 TEAD1 JASPAR yes 49198534
chr4 7962712 7962724 TEAD1 JASPAR yes 88147895
chr4 7962713 7962721 TEAD3 JASPAR yes 49198535
chr4 7962713 7962721 TEAD3 JASPAR yes 88147896
chr4 7962716 7962721 ETS2 TRANSFAC yes 49198536
chr4 7962716 7962721 ETS2 TRANSFAC yes 88147897
chr4 7962744 7962748 H1TF2 TRANSFAC yes 49198537
chr4 7962744 7962748 NFE TRANSFAC yes 49198538
chr4 7962744 7962748 SRF TRANSFAC yes 49198539
chr4 7962744 7962748 H1TF2 TRANSFAC yes 88147898
chr4 7962744 7962748 NFE TRANSFAC yes 88147899
chr4 7962744 7962748 SRF TRANSFAC yes 88147900
chr4 7962758 7962768 RUNX3 JASPAR yes 49198540
chr4 7962758 7962768 RUNX3 JASPAR yes 88147901
SNP sites on vista44076[chr4:7962509-7962775]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 7962534 rs533188747 G A
CEBPB USF1
7392721
chr4 7962685 rs145003598 G A
CEBPB RUNX3 USF1
7392722
chr4 7962707 rs567755154 C T
CEBPB RUNX3 USF1
7392723
Genes possibly regulated by vista44076[chr4:7962509-7962775]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 7760441 7941653 - AFAP1 ENSG00000196526.6 7941653 0.68 0.99 4520 79144
chr4 7940728 7942022 + AC097381.1 ENSG00000228919.3 7940728 0.77 1.0 4521 78219
Expression level of Genes
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miRNAs possibly regulated by vista44076[chr4:7962509-7962775]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results