EnhancerDB
  1. Home
  2. Enhancers
  3. vista44098[chr4:8254530-8254695]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista44098[chr4:8254530-8254695]
Back to top
Tissue distribution of vista44098
Back to top
Transcription factor that possibly regulate vista44098[chr4:8254530-8254695]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 8254397 8254753 RCOR1 UCSC Txn Factor no Conserved 108532048
chr4 8254441 8254757 EP300 UCSC Txn Factor no Conserved 108532049
chr4 8254467 8254729 NR2F2 UCSC Txn Factor no Conserved 108532050
chr4 8254491 8254699 TEAD4 UCSC Txn Factor no Conserved 108532051
chr4 8254525 8254536 CEBPB JASPAR yes 49199355
chr4 8254525 8254536 CEBPB JASPAR yes 88168841
chr4 8254542 8254551 UEF3 TRANSFAC yes 49199356
chr4 8254542 8254551 UEF3 TRANSFAC yes 88168842
chr4 8254563 8254567 YY1 TRANSFAC yes 49199357
chr4 8254563 8254567 YY1 TRANSFAC yes 88168843
chr4 8254564 8254572 FEV JASPAR yes 49199358
chr4 8254564 8254572 FEV JASPAR yes 88168844
chr4 8254592 8254610 RARA JASPAR yes 49199359
chr4 8254592 8254610 RARA JASPAR yes 88168845
chr4 8254603 8254618 RUNX2 JASPAR yes 49199360
chr4 8254603 8254618 RUNX2 JASPAR yes 88168846
chr4 8254607 8254617 RUNX3 JASPAR yes 49199361
chr4 8254607 8254617 RUNX3 JASPAR yes 88168847
chr4 8254608 8254617 RUNX2 JASPAR yes 49199362
chr4 8254608 8254617 RUNX2 JASPAR yes 88168848
chr4 8254617 8254625 GATA3 JASPAR yes 49199363
chr4 8254617 8254625 GATA5 JASPAR yes 49199364
chr4 8254617 8254625 GATA3 JASPAR yes 88168849
chr4 8254617 8254625 GATA5 JASPAR yes 88168850
chr4 8254627 8254631 YY1 TRANSFAC yes 49199365
chr4 8254627 8254631 YY1 TRANSFAC yes 88168851
chr4 8254632 8254642 MZF1 JASPAR yes 49199366
chr4 8254632 8254642 MZF1 JASPAR yes 88168852
chr4 8254635 8254640 TFAP2A TRANSFAC yes 49199367
chr4 8254635 8254640 TFAP2A TRANSFAC yes 88168853
chr4 8254635 8254641 MZF1 JASPAR yes 49199368
chr4 8254635 8254641 MZF1 JASPAR yes 88168854
chr4 8254635 8254656 ZNF263 JASPAR yes 49199369
chr4 8254635 8254656 ZNF263 JASPAR yes 88168855
chr4 8254641 8254655 PLAG1 JASPAR yes 49199370
chr4 8254641 8254655 PLAG1 JASPAR yes 88168856
chr4 8254643 8254653 SP1 JASPAR yes 49199371
chr4 8254643 8254653 SP1 JASPAR yes 88168857
chr4 8254645 8254650 ETS2 TRANSFAC yes 49199372
chr4 8254645 8254650 ETS2 TRANSFAC yes 88168858
chr4 8254654 8254659 SP1 TRANSFAC yes 49199373
chr4 8254654 8254659 SP1 TRANSFAC yes 88168859
SNP sites on vista44098[chr4:8254530-8254695]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 8254549 rs536506644 C T
EP300 NR2F2 RCOR1 TEAD4 UEF3
7395540
chr4 8254550 rs147540477 A G
EP300 NR2F2 RCOR1 TEAD4 UEF3
7395541
chr4 8254554 rs79920015 A G
EP300 NR2F2 RCOR1 TEAD4
7395542
chr4 8254605 rs190145376 G A
EP300 NR2F2 RARA RCOR1 RUNX2 TEAD4
7395543
chr4 8254664 rs565366673 C T
EP300 NR2F2 RCOR1 TEAD4
7395544
Genes possibly regulated by vista44098[chr4:8254530-8254695]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 7967039 8160559 - ABLIM2 ENSG00000163995.14 8160559 0.91 1.0 4522 6029
chr4 8183799 8243530 + SH3TC1 ENSG00000125089.12 8183799 0.94 1.0 4523 29269
chr4 8271492 8308838 + HTRA3 ENSG00000170801.5 8271492 0.88 0.99 4524 83203
Expression level of Genes
Back to top
miRNAs possibly regulated by vista44098[chr4:8254530-8254695]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results