EnhancerDB
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  3. vista4506[chr1:200321353-200321596]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4506[chr1:200321353-200321596]
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Tissue distribution of vista4506
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Transcription factor that possibly regulate vista4506[chr1:200321353-200321596]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200321118 200321474 IRF1 UCSC Txn Factor no Conserved 107855057
chr1 200321312 200321538 CEBPB UCSC Txn Factor no Conserved 107855061
chr1 200321495 200321729 RUNX3 UCSC Txn Factor no Conserved 107855062
chr1 200321417 200321424 NKX3-1 JASPAR yes 34438154
chr1 200321417 200321424 NKX3-1 JASPAR yes 118429786
chr1 200321420 200321425 GATA1 TRANSFAC yes 34438155
chr1 200321420 200321425 GATA1 TRANSFAC yes 118429787
chr1 200321440 200321456 POU4F2 JASPAR yes 34438156
chr1 200321440 200321456 POU4F2 JASPAR yes 118429788
chr1 200321442 200321446 YY1 TRANSFAC yes 34438157
chr1 200321442 200321446 YY1 TRANSFAC yes 118429789
chr1 200321443 200321451 FEV JASPAR yes 34438158
chr1 200321443 200321451 FEV JASPAR yes 118429790
chr1 200321445 200321460 MEF2A JASPAR yes 34438159
chr1 200321445 200321460 MEF2A JASPAR yes 118429791
chr1 200321449 200321453 YY1 TRANSFAC yes 34438160
chr1 200321449 200321453 YY1 TRANSFAC yes 118429792
chr1 200321460 200321470 NFATC3 JASPAR yes 34438161
chr1 200321460 200321470 NFATC3 JASPAR yes 118429793
chr1 200321462 200321469 NFATC2 JASPAR yes 34438162
chr1 200321462 200321469 NFATC2 JASPAR yes 118429794
chr1 200321480 200321488 GATA3 JASPAR yes 34438163
chr1 200321480 200321488 GATA5 JASPAR yes 34438164
chr1 200321480 200321488 GATA3 JASPAR yes 118429795
chr1 200321480 200321488 GATA5 JASPAR yes 118429796
chr1 200321504 200321519 FOXP1 JASPAR yes 34438165
chr1 200321504 200321519 FOXP1 JASPAR yes 118429797
chr1 200321506 200321511 ETS2 TRANSFAC yes 34438166
chr1 200321506 200321511 ETS2 TRANSFAC yes 118429798
chr1 200321507 200321518 FOXP2 JASPAR yes 34438167
chr1 200321507 200321518 FOXP2 JASPAR yes 118429799
chr1 200321508 200321516 FOXO3 JASPAR yes 34438168
chr1 200321508 200321516 FOXO3 JASPAR yes 118429800
chr1 200321531 200321545 TCF7L2 JASPAR yes 34438169
chr1 200321531 200321545 TCF7L2 JASPAR yes 118429801
chr1 200321546 200321550 YY1 TRANSFAC yes 34438170
chr1 200321546 200321550 YY1 TRANSFAC yes 118429802
chr1 200321580 200321595 RUNX2 JASPAR yes 34438171
chr1 200321580 200321595 RUNX2 JASPAR yes 118429803
chr1 200321583 200321594 RUNX1 JASPAR yes 34438172
chr1 200321583 200321594 RUNX1 JASPAR yes 118429804
chr1 200321584 200321594 RUNX3 JASPAR yes 34438173
chr1 200321584 200321594 RUNX3 JASPAR yes 118429805
chr1 200321585 200321594 RUNX2 JASPAR yes 34438174
chr1 200321585 200321594 RUNX2 JASPAR yes 118429806
chr1 200321588 200321603 HNF4G JASPAR yes 34438175
chr1 200321588 200321603 HNF4G JASPAR yes 118429807
chr1 200321593 200321599 SOX10 JASPAR yes 34438176
chr1 200321593 200321599 SOX10 JASPAR yes 118429808
SNP sites on vista4506[chr1:200321353-200321596]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200321403 rs12067258 T C
CEBPB IRF1
846772
chr1 200321406 rs12061736 G C
CEBPB IRF1
846773
chr1 200321569 rs532158164 T A
RUNX3
846774
Genes possibly regulated by vista4506[chr1:200321353-200321596]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200374068 200379184 - ZNF281 ENSG00000162702.7 200379184 0.67 0.98 1692 42412
Expression level of Genes
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miRNAs possibly regulated by vista4506[chr1:200321353-200321596]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results