EnhancerDB
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  3. vista4514[chr1:200448306-200448569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4514[chr1:200448306-200448569]
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Tissue distribution of vista4514
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Transcription factor that possibly regulate vista4514[chr1:200448306-200448569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200448318 200448339 ZNF263 JASPAR yes 34453294
chr1 200448318 200448339 ZNF263 JASPAR yes 118430080
chr1 200448320 200448340 RREB1 JASPAR yes 34453295
chr1 200448320 200448340 RREB1 JASPAR yes 118430081
chr1 200448329 200448337 TBX15 JASPAR yes 34453296
chr1 200448329 200448337 TBX15 JASPAR yes 118430082
chr1 200448352 200448367 PRDM1 JASPAR yes 34453297
chr1 200448352 200448367 PRDM1 JASPAR yes 118430083
chr1 200448383 200448389 GATA3 JASPAR yes 34453298
chr1 200448383 200448389 GATA3 JASPAR yes 118430084
chr1 200448387 200448405 NFYA JASPAR yes 34453299
chr1 200448387 200448405 NFYA JASPAR yes 118430085
chr1 200448389 200448393 H4TF2 TRANSFAC yes 34453300
chr1 200448389 200448393 H4TF2 TRANSFAC yes 118430086
chr1 200448402 200448411 SRY JASPAR yes 34453301
chr1 200448402 200448411 SRY JASPAR yes 118430087
chr1 200448415 200448425 HOXC10 JASPAR yes 34453302
chr1 200448415 200448425 HOXD11 JASPAR yes 34453303
chr1 200448415 200448425 HOXC10 JASPAR yes 118430088
chr1 200448415 200448425 HOXD11 JASPAR yes 118430089
chr1 200448415 200448426 HOXA10 JASPAR yes 34453304
chr1 200448415 200448426 HOXC11 JASPAR yes 34453305
chr1 200448415 200448426 HOXC12 JASPAR yes 34453306
chr1 200448415 200448426 HOXD12 JASPAR yes 34453307
chr1 200448415 200448426 HOXA10 JASPAR yes 118430090
chr1 200448415 200448426 HOXC11 JASPAR yes 118430091
chr1 200448415 200448426 HOXC12 JASPAR yes 118430092
chr1 200448415 200448426 HOXD12 JASPAR yes 118430093
chr1 200448416 200448425 CDX1 JASPAR yes 34453308
chr1 200448416 200448425 CDX1 JASPAR yes 118430094
chr1 200448416 200448427 CDX2 JASPAR yes 34453309
chr1 200448416 200448427 CDX2 JASPAR yes 118430095
chr1 200448420 200448434 RORA JASPAR yes 34453310
chr1 200448420 200448434 RORA JASPAR yes 118430096
chr1 200448421 200448431 RORA JASPAR yes 34453311
chr1 200448421 200448431 RORA JASPAR yes 118430097
chr1 200448427 200448433 GATA3 JASPAR yes 34453312
chr1 200448427 200448433 GATA3 JASPAR yes 118430098
chr1 200448435 200448449 CREB3L1 JASPAR yes 34453313
chr1 200448435 200448449 CREB3L1 JASPAR yes 118430099
chr1 200448436 200448447 NFE2L2 JASPAR yes 34453314
chr1 200448436 200448447 NFE2L2 JASPAR yes 118430100
chr1 200448440 200448457 RXRA JASPAR yes 34453315
chr1 200448440 200448457 RXRA JASPAR yes 118430101
chr1 200448441 200448445 ESR1 TRANSFAC yes 34453316
chr1 200448441 200448445 ESR1 TRANSFAC yes 118430102
chr1 200448453 200448468 HNF4A JASPAR yes 34453317
chr1 200448453 200448468 HNF4A JASPAR yes 118430103
chr1 200448454 200448469 HNF4G JASPAR yes 34453318
chr1 200448454 200448469 HNF4G JASPAR yes 118430104
chr1 200448459 200448473 MTF1 JASPAR yes 34453319
chr1 200448459 200448473 MTF1 JASPAR yes 118430105
chr1 200448495 200448512 BCL6B JASPAR yes 34453320
chr1 200448495 200448512 BCL6B JASPAR yes 118430106
chr1 200448539 200448560 REST JASPAR yes 34453321
chr1 200448539 200448560 REST JASPAR yes 118430107
chr1 200448540 200448559 REST JASPAR yes 34453322
chr1 200448540 200448559 REST JASPAR yes 118430108
SNP sites on vista4514[chr1:200448306-200448569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200448529 rs138500702 T C no 847957
Genes possibly regulated by vista4514[chr1:200448306-200448569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200374068 200379184 - ZNF281 ENSG00000162702.7 200379184 0.67 0.98 1692 30878
Expression level of Genes
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miRNAs possibly regulated by vista4514[chr1:200448306-200448569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results