EnhancerDB
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  3. vista4515[chr1:200457893-200457983]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4515[chr1:200457893-200457983]
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Tissue distribution of vista4515
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Transcription factor that possibly regulate vista4515[chr1:200457893-200457983]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200457855 200458218 CTCF UCSC Txn Factor no Conserved 107855342
chr1 200457867 200458133 RAD21 UCSC Txn Factor no Conserved 107855344
chr1 200457870 200458150 SMC3 UCSC Txn Factor no Conserved 107855349
chr1 200457903 200457907 YY1 TRANSFAC yes 34454695
chr1 200457903 200457907 YY1 TRANSFAC yes 118430109
chr1 200457905 200457920 HNF1A JASPAR yes 34454696
chr1 200457905 200457920 HNF1A JASPAR yes 118430110
chr1 200457906 200457919 HNF1B JASPAR yes 34454697
chr1 200457906 200457919 HNF1B JASPAR yes 118430111
chr1 200457912 200457920 HOXA5 JASPAR yes 34454698
chr1 200457912 200457920 HOXA5 JASPAR yes 118430112
chr1 200457920 200457938 SRF JASPAR yes 34454699
chr1 200457920 200457938 SRF JASPAR yes 118430113
chr1 200457920 200457939 REST JASPAR yes 34454700
chr1 200457920 200457939 REST JASPAR yes 118430114
chr1 200457922 200457938 SRF JASPAR yes 34454701
chr1 200457922 200457938 SRF JASPAR yes 118430115
chr1 200457933 200457938 ETS2 TRANSFAC yes 34454702
chr1 200457933 200457938 ETS2 TRANSFAC yes 118430116
chr1 200457939 200457954 RFX5 JASPAR yes 34454703
chr1 200457939 200457954 RFX5 JASPAR yes 118430117
chr1 200457951 200457962 TBX20 JASPAR yes 34454704
chr1 200457951 200457962 TBX20 JASPAR yes 118430118
chr1 200457975 200457983 GATA3 JASPAR yes 34454705
chr1 200457975 200457983 GATA3 JASPAR yes 118430119
chr1 200457979 200457994 FOXP1 JASPAR yes 34454706
chr1 200457979 200457994 FOXP1 JASPAR yes 118430120
SNP sites on vista4515[chr1:200457893-200457983]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200457943 rs138489237 G A
CTCF RAD21 RFX5 SMC3
848079
chr1 200457955 rs574654789 T A,C
CTCF RAD21 SMC3 TBX20
848080
Genes possibly regulated by vista4515[chr1:200457893-200457983]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200374068 200379184 - ZNF281 ENSG00000162702.7 200379184 0.67 0.98 1692 21291
Expression level of Genes
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miRNAs possibly regulated by vista4515[chr1:200457893-200457983]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results