EnhancerDB
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  3. vista4516[chr1:200481491-200481643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4516[chr1:200481491-200481643]
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Tissue distribution of vista4516
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Transcription factor that possibly regulate vista4516[chr1:200481491-200481643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200481509 200481524 MEF2A JASPAR yes 34455928
chr1 200481509 200481524 MEF2A JASPAR yes 118430121
chr1 200481510 200481525 MEF2C JASPAR yes 34455929
chr1 200481510 200481525 MEF2C JASPAR yes 118430122
chr1 200481511 200481523 MEF2A JASPAR yes 34455930
chr1 200481511 200481523 MEF2B JASPAR yes 34455931
chr1 200481511 200481523 MEF2D JASPAR yes 34455932
chr1 200481511 200481523 MEF2A JASPAR yes 118430123
chr1 200481511 200481523 MEF2B JASPAR yes 118430124
chr1 200481511 200481523 MEF2D JASPAR yes 118430125
chr1 200481512 200481522 MEF2A JASPAR yes 34455933
chr1 200481512 200481522 MEF2A JASPAR yes 118430126
chr1 200481513 200481517 YY1 TRANSFAC yes 34455934
chr1 200481513 200481517 YY1 TRANSFAC yes 118430127
chr1 200481534 200481555 MAFG JASPAR yes 34455935
chr1 200481534 200481555 MAFG JASPAR yes 118430128
chr1 200481539 200481550 FOS JASPAR yes 34455936
chr1 200481539 200481550 FOSL1 JASPAR yes 34455937
chr1 200481539 200481550 JUND JASPAR yes 34455938
chr1 200481539 200481550 FOS JASPAR yes 118430129
chr1 200481539 200481550 FOSL1 JASPAR yes 118430130
chr1 200481539 200481550 JUND JASPAR yes 118430131
chr1 200481540 200481551 JUNB JASPAR yes 34455939
chr1 200481540 200481551 NFE2L2 JASPAR yes 34455940
chr1 200481540 200481551 JUNB JASPAR yes 118430132
chr1 200481540 200481551 NFE2L2 JASPAR yes 118430133
chr1 200481541 200481552 BATF JASPAR yes 34455941
chr1 200481541 200481552 BATF JASPAR yes 118430134
chr1 200481549 200481562 DUXA JASPAR yes 34455942
chr1 200481549 200481562 DUXA JASPAR yes 118430135
chr1 200481550 200481561 DUX4 JASPAR yes 34455943
chr1 200481550 200481561 DUX4 JASPAR yes 118430136
chr1 200481565 200481568 MYB TRANSFAC yes 34455944
chr1 200481565 200481568 MYB TRANSFAC yes 118430137
chr1 200481573 200481586 EOMES JASPAR yes 34455945
chr1 200481573 200481586 EOMES JASPAR yes 118430138
chr1 200481575 200481579 ESR1 TRANSFAC yes 34455946
chr1 200481575 200481579 ESR1 TRANSFAC yes 118430139
chr1 200481585 200481600 RUNX2 JASPAR yes 34455947
chr1 200481585 200481600 RUNX2 JASPAR yes 118430140
chr1 200481609 200481613 LFA1 TRANSFAC yes 34455948
chr1 200481609 200481613 LFA1 TRANSFAC yes 118430141
chr1 200481616 200481622 HiNF-A TRANSFAC yes 34455949
chr1 200481616 200481622 HiNF-A TRANSFAC yes 118430142
chr1 200481623 200481635 NHLH1 JASPAR yes 34455950
chr1 200481623 200481635 NHLH1 JASPAR yes 118430143
chr1 200481624 200481634 NHLH1 JASPAR yes 34455951
chr1 200481624 200481634 NHLH1 JASPAR yes 118430144
SNP sites on vista4516[chr1:200481491-200481643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200481528 rs7549539 C T no 848166
chr1 200481555 rs7549548 C G,T
DUX4 DUXA MAFG
848167
chr1 200481579 rs4568863 C G
EOMES ESR1
848168
Genes possibly regulated by vista4516[chr1:200481491-200481643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4516[chr1:200481491-200481643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results