EnhancerDB
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  3. vista4519[chr1:200597363-200597666]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4519[chr1:200597363-200597666]
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Tissue distribution of vista4519
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Transcription factor that possibly regulate vista4519[chr1:200597363-200597666]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200597365 200597585 SPI1 UCSC Txn Factor no Conserved 107855389
chr1 200597394 200597990 RUNX3 UCSC Txn Factor no Conserved 107855395
chr1 200597367 200597378 TBX20 JASPAR yes 34459587
chr1 200597367 200597378 TBX20 JASPAR yes 118430195
chr1 200597381 200597402 IRF1 JASPAR yes 34459588
chr1 200597381 200597402 IRF1 JASPAR yes 118430196
chr1 200597396 200597400 NFE TRANSFAC yes 34459589
chr1 200597396 200597400 NFE TRANSFAC yes 118430197
chr1 200597432 200597452 ESR1 JASPAR yes 34459590
chr1 200597432 200597452 ESR1 JASPAR yes 118430198
chr1 200597435 200597453 ESR2 JASPAR yes 34459591
chr1 200597435 200597453 ESR2 JASPAR yes 118430199
chr1 200597436 200597454 ESR2 JASPAR yes 34459592
chr1 200597436 200597454 ESR2 JASPAR yes 118430200
chr1 200597437 200597452 ESR2 JASPAR yes 34459593
chr1 200597437 200597452 ESR2 JASPAR yes 118430201
chr1 200597437 200597457 ESR1 JASPAR yes 34459594
chr1 200597437 200597457 ESR1 JASPAR yes 118430202
chr1 200597439 200597449 GABPA JASPAR yes 34459595
chr1 200597439 200597449 GABPA JASPAR yes 118430203
chr1 200597439 200597452 ELF1 JASPAR yes 34459596
chr1 200597439 200597452 ELF1 JASPAR yes 118430204
chr1 200597454 200597458 TEAD2 TRANSFAC yes 34459597
chr1 200597454 200597458 TEAD2 TRANSFAC yes 118430205
chr1 200597456 200597459 MYB TRANSFAC yes 34459598
chr1 200597456 200597459 MYB TRANSFAC yes 118430206
chr1 200597456 200597470 NR2F1 JASPAR yes 34459599
chr1 200597456 200597470 NR2F1 JASPAR yes 118430207
chr1 200597468 200597482 NR2F1 JASPAR yes 34459600
chr1 200597468 200597482 NR2F1 JASPAR yes 118430208
chr1 200597471 200597489 IRF2 JASPAR yes 34459601
chr1 200597471 200597489 IRF2 JASPAR yes 118430209
chr1 200597472 200597493 IRF1 JASPAR yes 34459602
chr1 200597472 200597493 IRF1 JASPAR yes 118430210
chr1 200597474 200597489 STAT2 JASPAR yes 34459603
chr1 200597474 200597489 STAT2 JASPAR yes 118430211
chr1 200597475 200597489 STAT1 JASPAR yes 34459604
chr1 200597475 200597489 STAT1 JASPAR yes 118430212
chr1 200597476 200597488 IRF1 JASPAR yes 34459605
chr1 200597476 200597488 IRF1 JASPAR yes 118430213
chr1 200597476 200597491 IRF9 JASPAR yes 34459606
chr1 200597476 200597491 IRF9 JASPAR yes 118430214
chr1 200597481 200597485 YY1 TRANSFAC yes 34459607
chr1 200597481 200597485 YY1 TRANSFAC yes 118430215
chr1 200597501 200597507 MAZ TRANSFAC yes 34459608
chr1 200597501 200597507 MAZ TRANSFAC yes 118430216
chr1 200597502 200597512 MZF1 JASPAR yes 34459609
chr1 200597502 200597512 MZF1 JASPAR yes 118430217
chr1 200597506 200597520 BATF3 JASPAR yes 34459610
chr1 200597506 200597520 BATF3 JASPAR yes 118430218
chr1 200597507 200597521 XBP1 JASPAR yes 34459611
chr1 200597507 200597521 XBP1 JASPAR yes 118430219
chr1 200597508 200597516 ATF2 TRANSFAC yes 34459612
chr1 200597508 200597516 ATF2 TRANSFAC yes 118430220
chr1 200597509 200597514 ATF1 TRANSFAC yes 34459613
chr1 200597509 200597514 ATF1 TRANSFAC yes 118430221
chr1 200597538 200597548 ETS1 JASPAR yes 34459614
chr1 200597538 200597548 ETV1 JASPAR yes 34459615
chr1 200597538 200597548 ETV3 JASPAR yes 34459616
chr1 200597538 200597548 ETV4 JASPAR yes 34459617
chr1 200597538 200597548 ETV5 JASPAR yes 34459618
chr1 200597538 200597548 ETS1 JASPAR yes 118430222
chr1 200597538 200597548 ETV1 JASPAR yes 118430223
chr1 200597538 200597548 ETV3 JASPAR yes 118430224
chr1 200597538 200597548 ETV4 JASPAR yes 118430225
chr1 200597538 200597548 ETV5 JASPAR yes 118430226
chr1 200597546 200597551 TFAP2A TRANSFAC yes 34459619
chr1 200597546 200597551 TFAP2A TRANSFAC yes 118430227
chr1 200597546 200597552 MZF1 JASPAR yes 34459620
chr1 200597546 200597552 MZF1 JASPAR yes 118430228
chr1 200597546 200597556 RELA JASPAR yes 34459621
chr1 200597546 200597556 REL JASPAR yes 34459622
chr1 200597546 200597556 RELA JASPAR yes 118430229
chr1 200597546 200597556 REL JASPAR yes 118430230
chr1 200597546 200597557 NFKB1 JASPAR yes 34459623
chr1 200597546 200597557 NFKB1 JASPAR yes 118430231
chr1 200597546 200597559 NFKB1 JASPAR yes 34459624
chr1 200597546 200597559 NFKB2 JASPAR yes 34459625
chr1 200597546 200597559 NFKB1 JASPAR yes 118430232
chr1 200597546 200597559 NFKB2 JASPAR yes 118430233
chr1 200597547 200597557 NFKB1 JASPAR yes 34459626
chr1 200597547 200597557 RELA JASPAR yes 34459627
chr1 200597547 200597557 NFKB1 JASPAR yes 118430234
chr1 200597547 200597557 RELA JASPAR yes 118430235
chr1 200597547 200597558 NFKB1 JASPAR yes 34459628
chr1 200597547 200597558 NFKB1 JASPAR yes 118430236
chr1 200597551 200597572 ZNF263 JASPAR yes 34459629
chr1 200597551 200597572 ZNF263 JASPAR yes 118430237
chr1 200597561 200597567 MZF1 JASPAR yes 34459630
chr1 200597561 200597567 MZF1 JASPAR yes 118430238
chr1 200597563 200597584 ZNF263 JASPAR yes 34459631
chr1 200597563 200597584 ZNF263 JASPAR yes 118430239
chr1 200597565 200597585 RREB1 JASPAR yes 34459632
chr1 200597565 200597585 RREB1 JASPAR yes 118430240
chr1 200597571 200597583 ZBTB7A JASPAR yes 34459633
chr1 200597571 200597583 ZBTB7A JASPAR yes 118430241
chr1 200597572 200597577 SP1 TRANSFAC yes 34459634
chr1 200597572 200597577 SP1 TRANSFAC yes 118430242
chr1 200597576 200597586 ZNF740 JASPAR yes 34459635
chr1 200597576 200597586 ZNF740 JASPAR yes 118430243
chr1 200597580 200597586 SP1 TRANSFAC yes 34459636
chr1 200597580 200597586 SP1 TRANSFAC yes 118430244
chr1 200597584 200597595 USF2 JASPAR yes 34459637
chr1 200597584 200597595 USF2 JASPAR yes 118430245
chr1 200597585 200597595 MAX JASPAR yes 34459638
chr1 200597585 200597595 MAX JASPAR yes 118430246
chr1 200597602 200597608 MZF1 JASPAR yes 34459639
chr1 200597602 200597608 MZF1 JASPAR yes 118430247
chr1 200597626 200597632 SOX10 JASPAR yes 34459640
chr1 200597626 200597632 SOX10 JASPAR yes 118430248
chr1 200597628 200597642 GATA2 JASPAR yes 34459641
chr1 200597628 200597642 GATA2 JASPAR yes 118430249
chr1 200597630 200597638 GATA3 JASPAR yes 34459642
chr1 200597630 200597638 GATA5 JASPAR yes 34459643
chr1 200597630 200597638 GATA3 JASPAR yes 118430250
chr1 200597630 200597638 GATA5 JASPAR yes 118430251
chr1 200597644 200597655 CEBPB JASPAR yes 34459644
chr1 200597644 200597655 CEBPB JASPAR yes 118430252
chr1 200597645 200597656 CEBPA JASPAR yes 34459645
chr1 200597645 200597656 CEBPA JASPAR yes 118430253
chr1 200597651 200597654 MYB TRANSFAC yes 34459646
chr1 200597651 200597654 MYB TRANSFAC yes 118430254
chr1 200597653 200597664 USF2 JASPAR yes 34459647
chr1 200597653 200597664 USF2 JASPAR yes 118430255
chr1 200597659 200597672 SMAD2 JASPAR yes 34459648
chr1 200597659 200597672 SMAD2 JASPAR yes 118430256
SNP sites on vista4519[chr1:200597363-200597666]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200597374 rs115800473 T A
SPI1 TBX20
848630
chr1 200597387 rs150120720 C T
IRF1 SPI1
848631
chr1 200597398 rs118067422 T C
IRF1 NFE RUNX3 SPI1
848632
chr1 200597536 rs2809343 G C,T
RUNX3 SPI1
848633
chr1 200597650 rs2809342 C T
CEBPA CEBPB RUNX3
848634
chr1 200597655 rs149300723 C G
CEBPA CEBPB RUNX3 USF2
848635
Genes possibly regulated by vista4519[chr1:200597363-200597666]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200520628 200589862 - KIF14 ENSG00000118193.7 200589862 0.94 0.98 1693 92499
chr1 200593024 200639097 - DDX59 ENSG00000118197.9 200639097 0.69 0.99 1694 58569
Expression level of Genes
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miRNAs possibly regulated by vista4519[chr1:200597363-200597666]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results