EnhancerDB
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  3. vista4520[chr1:200611653-200611882]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4520[chr1:200611653-200611882]
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Tissue distribution of vista4520
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Transcription factor that possibly regulate vista4520[chr1:200611653-200611882]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200611659 200611675 SOX4 JASPAR yes 118430257
chr1 200611671 200611692 REST JASPAR yes 118430258
chr1 200611677 200611697 RREB1 JASPAR yes 118430259
chr1 200611691 200611710 PAX5 JASPAR yes 118430260
chr1 200611706 200611719 ELF1 JASPAR yes 118430261
chr1 200611707 200611719 EHF JASPAR yes 118430262
chr1 200611707 200611720 ELF3 JASPAR yes 118430263
chr1 200611708 200611719 ELF5 JASPAR yes 118430264
chr1 200611710 200611715 ETS2 TRANSFAC yes 118430265
chr1 200611710 200611718 FEV JASPAR yes 118430266
chr1 200611711 200611718 SPI1 JASPAR yes 118430267
chr1 200611715 200611731 RFX5 JASPAR yes 118430268
chr1 200611716 200611725 NFIX JASPAR yes 118430269
chr1 200611718 200611724 NFIC JASPAR yes 118430270
chr1 200611723 200611728 ETS2 TRANSFAC yes 118430271
chr1 200611736 200611741 ETS2 TRANSFAC yes 118430272
chr1 200611743 200611757 SPI1 JASPAR yes 118430273
chr1 200611767 200611780 ELF1 JASPAR yes 118430274
chr1 200611784 200611787 MYB TRANSFAC yes 118430275
chr1 200611810 200611821 E2F6 JASPAR yes 118430276
chr1 200611812 200611833 ZNF263 JASPAR yes 118430277
chr1 200611814 200611819 ETS2 TRANSFAC yes 118430278
chr1 200611824 200611829 ETS2 TRANSFAC yes 118430279
chr1 200611848 200611866 SRF JASPAR yes 118430280
chr1 200611861 200611865 YY1 TRANSFAC yes 118430281
chr1 200611865 200611877 BHLHE23 JASPAR yes 118430282
chr1 200611865 200611877 PKNOX2 JASPAR yes 118430283
chr1 200611866 200611876 NEUROD2 JASPAR yes 118430284
SNP sites on vista4520[chr1:200611653-200611882]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200611710 rs6695836 C T
EHF ELF1 ELF3 ELF5 ETS2 FEV PAX5
848764
chr1 200611844 rs144337470 G A no 848765
chr1 200611854 rs148805957 C A
SRF
848766
Genes possibly regulated by vista4520[chr1:200611653-200611882]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200520628 200589862 - KIF14 ENSG00000118193.7 200589862 0.94 0.98 1693 78209
chr1 200593024 200639097 - DDX59 ENSG00000118197.9 200639097 0.69 0.99 1694 72785
chr1 200708686 200829832 + CAMSAP2 ENSG00000118200.10 200708686 0.69 0.99 1695 3196
Expression level of Genes
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miRNAs possibly regulated by vista4520[chr1:200611653-200611882]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results