EnhancerDB
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  3. vista4522[chr1:200715755-200716027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4522[chr1:200715755-200716027]
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Tissue distribution of vista4522
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Transcription factor that possibly regulate vista4522[chr1:200715755-200716027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200715766 200715778 PROX1 JASPAR yes 118430299
chr1 200715772 200715791 PAX5 JASPAR yes 118430300
chr1 200715780 200715784 NFE TRANSFAC yes 118430301
chr1 200715802 200715812 SREBF1 JASPAR yes 118430302
chr1 200715802 200715812 SREBF2 JASPAR yes 118430303
chr1 200715827 200715836 SP1 TRANSFAC yes 118430304
chr1 200715828 200715836 SP1 TRANSFAC yes 118430305
chr1 200715828 200715838 SP1 JASPAR yes 118430306
chr1 200715840 200715861 REST JASPAR yes 118430307
chr1 200715849 200715870 ZNF263 JASPAR yes 118430308
chr1 200715892 200715913 REST JASPAR yes 118430309
chr1 200715893 200715912 REST JASPAR yes 118430310
chr1 200715898 200715908 SP1 JASPAR yes 118430311
chr1 200715901 200715906 SP1 TRANSFAC yes 118430312
chr1 200715916 200715931 MEF2A JASPAR yes 118430313
chr1 200715917 200715932 MEF2C JASPAR yes 118430314
chr1 200715918 200715930 MEF2A JASPAR yes 118430315
chr1 200715918 200715930 MEF2B JASPAR yes 118430316
chr1 200715918 200715930 MEF2D JASPAR yes 118430317
chr1 200715920 200715924 YY1 TRANSFAC yes 118430318
chr1 200715935 200715948 NFKB1 JASPAR yes 118430319
chr1 200715935 200715948 NFKB2 JASPAR yes 118430320
chr1 200715943 200715948 MYC TRANSFAC yes 118430321
chr1 200715986 200715992 NFE2 TRANSFAC yes 118430322
chr1 200715987 200716001 GLIS2 JASPAR yes 118430323
chr1 200715989 200716003 PLAG1 JASPAR yes 118430324
chr1 200715997 200716011 GLIS3 JASPAR yes 118430325
SNP sites on vista4522[chr1:200715755-200716027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200715777 rs368520163 T C
PAX5 PROX1
849598
chr1 200715780 rs371343119 C T
NFE PAX5
849599
chr1 200715807 rs148760979 C A,T
SREBF1 SREBF2
849600
chr1 200715815 rs142468004 C T no 849601
chr1 200715872 rs146863691 G A no 849602
chr1 200715904 rs530805034 G A
REST SP1
849603
chr1 200715975 rs6665490 C T no 849604
chr1 200715981 rs539877211 C G,T no 849605
Genes possibly regulated by vista4522[chr1:200715755-200716027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200593024 200639097 - DDX59 ENSG00000118197.9 200639097 0.69 0.99 1694 23342
chr1 200708686 200829832 + CAMSAP2 ENSG00000118200.10 200708686 0.69 0.99 1695 92931
Expression level of Genes
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miRNAs possibly regulated by vista4522[chr1:200715755-200716027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results