EnhancerDB
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  3. vista4523[chr1:200750000-200750140]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4523[chr1:200750000-200750140]
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Tissue distribution of vista4523
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Transcription factor that possibly regulate vista4523[chr1:200750000-200750140]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200749983 200750004 IRF1 JASPAR yes 34471419
chr1 200749983 200750004 IRF1 JASPAR yes 118430326
chr1 200749985 200750000 PRDM1 JASPAR yes 34471420
chr1 200749985 200750000 STAT2 JASPAR yes 34471421
chr1 200749985 200750000 PRDM1 JASPAR yes 118430327
chr1 200749985 200750000 STAT2 JASPAR yes 118430328
chr1 200749990 200750005 FOXP1 JASPAR yes 34471422
chr1 200749990 200750005 FOXP1 JASPAR yes 118430329
chr1 200749990 200750011 IRF1 JASPAR yes 34471423
chr1 200749990 200750011 IRF1 JASPAR yes 118430330
chr1 200750015 200750034 PAX5 JASPAR yes 34471424
chr1 200750015 200750034 PAX5 JASPAR yes 118430331
chr1 200750017 200750022 ETS2 TRANSFAC yes 34471425
chr1 200750017 200750022 ETS2 TRANSFAC yes 118430332
chr1 200750017 200750031 STAT1 JASPAR yes 34471426
chr1 200750017 200750031 STAT1 JASPAR yes 118430333
chr1 200750020 200750034 PAX6 JASPAR yes 34471427
chr1 200750020 200750034 PAX6 JASPAR yes 118430334
chr1 200750052 200750057 TFAP2A TRANSFAC yes 34471428
chr1 200750052 200750057 TFAP2A TRANSFAC yes 118430335
chr1 200750052 200750058 MZF1 JASPAR yes 34471429
chr1 200750052 200750058 MZF1 JASPAR yes 118430336
chr1 200750086 200750100 IRF7 JASPAR yes 34471430
chr1 200750086 200750100 IRF8 JASPAR yes 34471431
chr1 200750086 200750100 IRF7 JASPAR yes 118430337
chr1 200750086 200750100 IRF8 JASPAR yes 118430338
chr1 200750086 200750101 IRF9 JASPAR yes 34471432
chr1 200750086 200750101 IRF9 JASPAR yes 118430339
chr1 200750087 200750105 IRF2 JASPAR yes 34471433
chr1 200750087 200750105 IRF2 JASPAR yes 118430340
chr1 200750088 200750109 IRF1 JASPAR yes 34471434
chr1 200750088 200750109 IRF1 JASPAR yes 118430341
chr1 200750090 200750105 PRDM1 JASPAR yes 34471435
chr1 200750090 200750105 STAT2 JASPAR yes 34471436
chr1 200750090 200750105 PRDM1 JASPAR yes 118430342
chr1 200750090 200750105 STAT2 JASPAR yes 118430343
chr1 200750091 200750105 STAT1 JASPAR yes 34471437
chr1 200750091 200750105 STAT1 JASPAR yes 118430344
chr1 200750092 200750104 IRF1 JASPAR yes 34471438
chr1 200750092 200750104 IRF1 JASPAR yes 118430345
chr1 200750092 200750106 IRF7 JASPAR yes 34471439
chr1 200750092 200750106 IRF8 JASPAR yes 34471440
chr1 200750092 200750106 IRF7 JASPAR yes 118430346
chr1 200750092 200750106 IRF8 JASPAR yes 118430347
chr1 200750092 200750107 IRF9 JASPAR yes 34471441
chr1 200750092 200750107 IRF9 JASPAR yes 118430348
chr1 200750105 200750116 HOXA10 JASPAR yes 34471442
chr1 200750105 200750116 HOXA10 JASPAR yes 118430349
chr1 200750106 200750115 CDX1 JASPAR yes 34471443
chr1 200750106 200750115 CDX1 JASPAR yes 118430350
chr1 200750106 200750116 HOXA13 JASPAR yes 34471444
chr1 200750106 200750116 HOXB13 JASPAR yes 34471445
chr1 200750106 200750116 HOXD13 JASPAR yes 34471446
chr1 200750106 200750116 HOXA13 JASPAR yes 118430351
chr1 200750106 200750116 HOXB13 JASPAR yes 118430352
chr1 200750106 200750116 HOXD13 JASPAR yes 118430353
SNP sites on vista4523[chr1:200750000-200750140]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200750099 rs186658211 G A,C
IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 STAT1 STAT2
849858
Genes possibly regulated by vista4523[chr1:200750000-200750140]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200708686 200829832 + CAMSAP2 ENSG00000118200.10 200708686 0.69 0.99 1695 58686
chr1 200842083 200843306 + GPR25 ENSG00000170128.2 200842083 0.93 0.0 1696 8057
Expression level of Genes
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miRNAs possibly regulated by vista4523[chr1:200750000-200750140]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results