EnhancerDB
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  3. vista45250[chr4:84140527-84140710]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45250[chr4:84140527-84140710]
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Tissue distribution of vista45250
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Transcription factor that possibly regulate vista45250[chr4:84140527-84140710]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 84140502 84140818 EBF1 UCSC Txn Factor no Conserved 108533002
chr4 84140550 84140565 PRDM1 JASPAR yes 49251716
chr4 84140550 84140565 PRDM1 JASPAR yes 90897404
chr4 84140575 84140584 HiNF-C TRANSFAC yes 49251717
chr4 84140575 84140584 HiNF-C TRANSFAC yes 90897405
chr4 84140575 84140585 SP1 JASPAR yes 49251718
chr4 84140575 84140585 SP1 JASPAR yes 90897406
chr4 84140576 84140582 SP1 TRANSFAC yes 49251719
chr4 84140576 84140582 SP1 TRANSFAC yes 90897407
chr4 84140577 84140582 SP1 TRANSFAC yes 49251720
chr4 84140577 84140582 SP1 TRANSFAC yes 90897408
chr4 84140578 84140583 SP1 TRANSFAC yes 49251721
chr4 84140578 84140583 SP1 TRANSFAC yes 90897409
chr4 84140578 84140584 SP1 TRANSFAC yes 49251722
chr4 84140578 84140584 SP1 TRANSFAC yes 90897410
chr4 84140589 84140595 PEA3 TRANSFAC yes 49251723
chr4 84140589 84140595 PEA3 TRANSFAC yes 90897411
chr4 84140591 84140606 AR JASPAR yes 49251724
chr4 84140591 84140606 AR JASPAR yes 90897412
chr4 84140591 84140608 NR3C1 JASPAR yes 49251725
chr4 84140591 84140608 NR3C2 JASPAR yes 49251726
chr4 84140591 84140608 NR3C1 JASPAR yes 90897413
chr4 84140591 84140608 NR3C2 JASPAR yes 90897414
chr4 84140625 84140634 SOX9 JASPAR yes 49251727
chr4 84140625 84140634 SOX9 JASPAR yes 90897415
chr4 84140628 84140645 BCL6B JASPAR yes 49251728
chr4 84140628 84140645 BCL6B JASPAR yes 90897416
chr4 84140629 84140644 STAT1 JASPAR yes 49251729
chr4 84140629 84140644 STAT1 JASPAR yes 90897417
chr4 84140631 84140642 STAT1 JASPAR yes 49251730
chr4 84140631 84140642 STAT3 JASPAR yes 49251731
chr4 84140631 84140642 STAT1 JASPAR yes 90897418
chr4 84140631 84140642 STAT3 JASPAR yes 90897419
chr4 84140632 84140640 STAT6 TRANSFAC yes 49251732
chr4 84140632 84140640 STAT6 TRANSFAC yes 90897420
chr4 84140637 84140652 STAT2 JASPAR yes 49251733
chr4 84140637 84140652 STAT2 JASPAR yes 90897421
chr4 84140640 84140651 TBX20 JASPAR yes 49251734
chr4 84140640 84140651 TBX20 JASPAR yes 90897422
chr4 84140649 84140652 MYB TRANSFAC yes 49251735
chr4 84140649 84140652 MYB TRANSFAC yes 90897423
chr4 84140667 84140681 TLX1 JASPAR yes 49251736
chr4 84140667 84140681 TLX1 JASPAR yes 90897424
chr4 84140675 84140687 NHLH1 JASPAR yes 49251737
chr4 84140675 84140687 NHLH1 JASPAR yes 90897425
chr4 84140682 84140687 TFAP2A TRANSFAC yes 49251738
chr4 84140682 84140687 TFAP2A TRANSFAC yes 90897426
chr4 84140682 84140688 MZF1 JASPAR yes 49251739
chr4 84140682 84140688 MZF1 JASPAR yes 90897427
chr4 84140686 84140696 POU6F2 JASPAR yes 49251740
chr4 84140686 84140696 POU6F2 JASPAR yes 90897428
chr4 84140687 84140697 EMX1 JASPAR yes 49251741
chr4 84140687 84140697 EMX2 JASPAR yes 49251742
chr4 84140687 84140697 ESX1 JASPAR yes 49251743
chr4 84140687 84140697 GBX1 JASPAR yes 49251744
chr4 84140687 84140697 GBX2 JASPAR yes 49251745
chr4 84140687 84140697 GSX1 JASPAR yes 49251746
chr4 84140687 84140697 GSX2 JASPAR yes 49251747
chr4 84140687 84140697 HESX1 JASPAR yes 49251748
chr4 84140687 84140697 HOXA2 JASPAR yes 49251749
chr4 84140687 84140697 HOXB2 JASPAR yes 49251750
chr4 84140687 84140697 HOXB3 JASPAR yes 49251751
chr4 84140687 84140697 LBX2 JASPAR yes 49251752
chr4 84140687 84140697 LHX2 JASPAR yes 49251753
chr4 84140687 84140697 LHX6 JASPAR yes 49251754
chr4 84140687 84140697 MEOX1 JASPAR yes 49251755
chr4 84140687 84140697 MEOX2 JASPAR yes 49251756
chr4 84140687 84140697 MIXL1 JASPAR yes 49251757
chr4 84140687 84140697 MNX1 JASPAR yes 49251758
chr4 84140687 84140697 NOTO JASPAR yes 49251759
chr4 84140687 84140697 POU6F1 JASPAR yes 49251760
chr4 84140687 84140697 RAX JASPAR yes 49251761
chr4 84140687 84140697 EMX1 JASPAR yes 90897429
chr4 84140687 84140697 EMX2 JASPAR yes 90897430
chr4 84140687 84140697 ESX1 JASPAR yes 90897431
chr4 84140687 84140697 GBX1 JASPAR yes 90897432
chr4 84140687 84140697 GBX2 JASPAR yes 90897433
chr4 84140687 84140697 GSX1 JASPAR yes 90897434
chr4 84140687 84140697 GSX2 JASPAR yes 90897435
chr4 84140687 84140697 HESX1 JASPAR yes 90897436
chr4 84140687 84140697 HOXA2 JASPAR yes 90897437
chr4 84140687 84140697 HOXB2 JASPAR yes 90897438
chr4 84140687 84140697 HOXB3 JASPAR yes 90897439
chr4 84140687 84140697 LBX2 JASPAR yes 90897440
chr4 84140687 84140697 LHX2 JASPAR yes 90897441
chr4 84140687 84140697 LHX6 JASPAR yes 90897442
chr4 84140687 84140697 MEOX1 JASPAR yes 90897443
chr4 84140687 84140697 MEOX2 JASPAR yes 90897444
chr4 84140687 84140697 MIXL1 JASPAR yes 90897445
chr4 84140687 84140697 MNX1 JASPAR yes 90897446
chr4 84140687 84140697 NOTO JASPAR yes 90897447
chr4 84140687 84140697 POU6F1 JASPAR yes 90897448
chr4 84140687 84140697 RAX JASPAR yes 90897449
chr4 84140688 84140696 BSX JASPAR yes 49251762
chr4 84140688 84140696 DLX6 JASPAR yes 49251763
chr4 84140688 84140696 EN1 JASPAR yes 49251764
chr4 84140688 84140696 ISX JASPAR yes 49251765
chr4 84140688 84140696 LBX1 JASPAR yes 49251766
chr4 84140688 84140696 LHX9 JASPAR yes 49251767
chr4 84140688 84140696 LMX1A JASPAR yes 49251768
chr4 84140688 84140696 LMX1B JASPAR yes 49251769
chr4 84140688 84140696 NKX6-1 JASPAR yes 49251770
chr4 84140688 84140696 NKX6-2 JASPAR yes 49251771
chr4 84140688 84140696 PAX4 JASPAR yes 49251772
chr4 84140688 84140696 PDX1 JASPAR yes 49251773
chr4 84140688 84140696 PRRX1 JASPAR yes 49251774
chr4 84140688 84140696 RAX2 JASPAR yes 49251775
chr4 84140688 84140696 SHOX JASPAR yes 49251776
chr4 84140688 84140696 UNCX JASPAR yes 49251777
chr4 84140688 84140696 VAX1 JASPAR yes 49251778
chr4 84140688 84140696 VAX2 JASPAR yes 49251779
chr4 84140688 84140696 VSX1 JASPAR yes 49251780
chr4 84140688 84140696 VSX2 JASPAR yes 49251781
chr4 84140688 84140696 BSX JASPAR yes 90897450
chr4 84140688 84140696 DLX6 JASPAR yes 90897451
chr4 84140688 84140696 EN1 JASPAR yes 90897452
chr4 84140688 84140696 ISX JASPAR yes 90897453
chr4 84140688 84140696 LBX1 JASPAR yes 90897454
chr4 84140688 84140696 LHX9 JASPAR yes 90897455
chr4 84140688 84140696 LMX1A JASPAR yes 90897456
chr4 84140688 84140696 LMX1B JASPAR yes 90897457
chr4 84140688 84140696 NKX6-1 JASPAR yes 90897458
chr4 84140688 84140696 NKX6-2 JASPAR yes 90897459
chr4 84140688 84140696 PAX4 JASPAR yes 90897460
chr4 84140688 84140696 PDX1 JASPAR yes 90897461
chr4 84140688 84140696 PRRX1 JASPAR yes 90897462
chr4 84140688 84140696 RAX2 JASPAR yes 90897463
chr4 84140688 84140696 SHOX JASPAR yes 90897464
chr4 84140688 84140696 UNCX JASPAR yes 90897465
chr4 84140688 84140696 VAX1 JASPAR yes 90897466
chr4 84140688 84140696 VAX2 JASPAR yes 90897467
chr4 84140688 84140696 VSX1 JASPAR yes 90897468
chr4 84140688 84140696 VSX2 JASPAR yes 90897469
chr4 84140696 84140715 RFX2 JASPAR yes 49251782
chr4 84140696 84140715 RFX2 JASPAR yes 90897470
chr4 84140707 84140717 NEUROG2 JASPAR yes 49251783
chr4 84140707 84140717 NEUROG2 JASPAR yes 90897471
SNP sites on vista45250[chr4:84140527-84140710]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 84140581 rs184560906 C G,T
EBF1 HiNF-C SP1
7653230
chr4 84140667 rs62303517 G A
EBF1 TLX1
7653231
Genes possibly regulated by vista45250[chr4:84140527-84140710]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 84011201 84058228 - PLAC8 ENSG00000145287.6 84058228 0.94 0.98 4833 17701
chr4 84182689 84206067 - COQ2 ENSG00000173085.9 84206067 0.79 0.99 4834 34643
Expression level of Genes
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miRNAs possibly regulated by vista45250[chr4:84140527-84140710]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results