EnhancerDB
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  3. vista45266[chr4:84478147-84478291]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45266[chr4:84478147-84478291]
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Tissue distribution of vista45266
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Transcription factor that possibly regulate vista45266[chr4:84478147-84478291]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 84478138 84478150 PKNOX1 JASPAR yes 49252440
chr4 84478138 84478150 TGIF2 JASPAR yes 49252441
chr4 84478138 84478150 PKNOX1 JASPAR yes 90919046
chr4 84478138 84478150 TGIF2 JASPAR yes 90919047
chr4 84478164 84478182 SRF JASPAR yes 49252442
chr4 84478164 84478182 SRF JASPAR yes 90919048
chr4 84478166 84478182 SRF JASPAR yes 49252443
chr4 84478166 84478182 SRF JASPAR yes 90919049
chr4 84478166 84478184 SRF JASPAR yes 49252444
chr4 84478166 84478184 SRF JASPAR yes 90919050
chr4 84478169 84478181 SRF JASPAR yes 49252445
chr4 84478169 84478181 SRF JASPAR yes 90919051
chr4 84478172 84478176 TEAD2 TRANSFAC yes 49252446
chr4 84478172 84478176 TEAD2 TRANSFAC yes 90919052
chr4 84478174 84478183 THAP1 JASPAR yes 49252447
chr4 84478174 84478183 THAP1 JASPAR yes 90919053
chr4 84478177 84478181 LFA1 TRANSFAC yes 49252448
chr4 84478177 84478181 LFA1 TRANSFAC yes 90919054
chr4 84478203 84478214 GCM1 JASPAR yes 49252449
chr4 84478203 84478214 GCM1 JASPAR yes 90919055
chr4 84478208 84478221 JUN JASPAR yes 49252450
chr4 84478208 84478221 JUN JASPAR yes 90919056
chr4 84478211 84478224 DUXA JASPAR yes 49252451
chr4 84478211 84478224 DUXA JASPAR yes 90919057
chr4 84478211 84478225 RORA JASPAR yes 49252452
chr4 84478211 84478225 RORA JASPAR yes 90919058
chr4 84478212 84478223 PHOX2A JASPAR yes 49252453
chr4 84478212 84478223 PHOX2A JASPAR yes 90919059
chr4 84478215 84478225 ALX3 JASPAR yes 49252454
chr4 84478215 84478225 EMX1 JASPAR yes 49252455
chr4 84478215 84478225 EMX2 JASPAR yes 49252456
chr4 84478215 84478225 ESX1 JASPAR yes 49252457
chr4 84478215 84478225 EVX1 JASPAR yes 49252458
chr4 84478215 84478225 EVX2 JASPAR yes 49252459
chr4 84478215 84478225 GBX2 JASPAR yes 49252460
chr4 84478215 84478225 GSX1 JASPAR yes 49252461
chr4 84478215 84478225 HOXA2 JASPAR yes 49252462
chr4 84478215 84478225 HOXB2 JASPAR yes 49252463
chr4 84478215 84478225 HOXB3 JASPAR yes 49252464
chr4 84478215 84478225 LHX2 JASPAR yes 49252465
chr4 84478215 84478225 LHX6 JASPAR yes 49252466
chr4 84478215 84478225 MEOX1 JASPAR yes 49252467
chr4 84478215 84478225 MEOX2 JASPAR yes 49252468
chr4 84478215 84478225 MIXL1 JASPAR yes 49252469
chr4 84478215 84478225 MNX1 JASPAR yes 49252470
chr4 84478215 84478225 NOTO JASPAR yes 49252471
chr4 84478215 84478225 ALX3 JASPAR yes 90919060
chr4 84478215 84478225 EMX1 JASPAR yes 90919061
chr4 84478215 84478225 EMX2 JASPAR yes 90919062
chr4 84478215 84478225 ESX1 JASPAR yes 90919063
chr4 84478215 84478225 EVX1 JASPAR yes 90919064
chr4 84478215 84478225 EVX2 JASPAR yes 90919065
chr4 84478215 84478225 GBX2 JASPAR yes 90919066
chr4 84478215 84478225 GSX1 JASPAR yes 90919067
chr4 84478215 84478225 HOXA2 JASPAR yes 90919068
chr4 84478215 84478225 HOXB2 JASPAR yes 90919069
chr4 84478215 84478225 HOXB3 JASPAR yes 90919070
chr4 84478215 84478225 LHX2 JASPAR yes 90919071
chr4 84478215 84478225 LHX6 JASPAR yes 90919072
chr4 84478215 84478225 MEOX1 JASPAR yes 90919073
chr4 84478215 84478225 MEOX2 JASPAR yes 90919074
chr4 84478215 84478225 MIXL1 JASPAR yes 90919075
chr4 84478215 84478225 MNX1 JASPAR yes 90919076
chr4 84478215 84478225 NOTO JASPAR yes 90919077
chr4 84478216 84478224 DLX6 JASPAR yes 49252472
chr4 84478216 84478224 EN1 JASPAR yes 49252473
chr4 84478216 84478224 LBX1 JASPAR yes 49252474
chr4 84478216 84478224 PAX4 JASPAR yes 49252475
chr4 84478216 84478224 PDX1 JASPAR yes 49252476
chr4 84478216 84478224 VAX1 JASPAR yes 49252477
chr4 84478216 84478224 VAX2 JASPAR yes 49252478
chr4 84478216 84478224 VSX1 JASPAR yes 49252479
chr4 84478216 84478224 VSX2 JASPAR yes 49252480
chr4 84478216 84478224 DLX6 JASPAR yes 90919078
chr4 84478216 84478224 EN1 JASPAR yes 90919079
chr4 84478216 84478224 LBX1 JASPAR yes 90919080
chr4 84478216 84478224 PAX4 JASPAR yes 90919081
chr4 84478216 84478224 PDX1 JASPAR yes 90919082
chr4 84478216 84478224 VAX1 JASPAR yes 90919083
chr4 84478216 84478224 VAX2 JASPAR yes 90919084
chr4 84478216 84478224 VSX1 JASPAR yes 90919085
chr4 84478216 84478224 VSX2 JASPAR yes 90919086
chr4 84478232 84478236 H4TF2 TRANSFAC yes 49252481
chr4 84478232 84478236 H4TF2 TRANSFAC yes 90919087
chr4 84478234 84478242 TBX15 JASPAR yes 49252482
chr4 84478234 84478242 TBX15 JASPAR yes 90919088
chr4 84478250 84478261 ESRRA JASPAR yes 49252483
chr4 84478250 84478261 ESRRA JASPAR yes 90919089
chr4 84478258 84478263 TFAP2A TRANSFAC yes 49252484
chr4 84478258 84478263 TFAP2A TRANSFAC yes 90919090
chr4 84478258 84478264 MZF1 JASPAR yes 49252485
chr4 84478258 84478264 MZF1 JASPAR yes 90919091
chr4 84478259 84478269 GSC2 JASPAR yes 49252486
chr4 84478259 84478269 GSC JASPAR yes 49252487
chr4 84478259 84478269 GSC2 JASPAR yes 90919092
chr4 84478259 84478269 GSC JASPAR yes 90919093
chr4 84478260 84478268 OTX1 JASPAR yes 49252488
chr4 84478260 84478268 OTX1 JASPAR yes 90919094
chr4 84478260 84478269 PITX3 JASPAR yes 49252489
chr4 84478260 84478269 PITX3 JASPAR yes 90919095
chr4 84478285 84478291 NFIC JASPAR yes 49252490
chr4 84478285 84478291 NFIC JASPAR yes 90919096
SNP sites on vista45266[chr4:84478147-84478291]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 84478189 rs6812267 C T no 7655378
chr4 84478272 rs148015617 T G no 7655379
Genes possibly regulated by vista45266[chr4:84478147-84478291]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 84382092 84444501 - FAM175A ENSG00000163322.9 84444501 0.79 0.99 4838 66354
chr4 84457067 84527028 + AGPAT9 ENSG00000138678.6 84457067 0.83 1.0 4839 78920
Expression level of Genes
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miRNAs possibly regulated by vista45266[chr4:84478147-84478291]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results